RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 TTBK1Q5TCY1 1321 aaPredicted RBP14.76□□□□□ -0.05
SMARCA2-260ENST00000637352 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
SMARCA2-260ENST00000637352 BIVM-ERCC5R4GMW8 1640 aa14.75□□□□□ -0.05
SMARCA2-260ENST00000637352 ABCC10Q5T3U5 1492 aa14.73□□□□□ -0.05
SMARCA2-260ENST00000637352 KDM4FA0A1W2PPD8 638 aa14.71□□□□□ -0.05
SMARCA2-260ENST00000637352 RUSC2Q8N2Y8 1516 aa14.67□□□□□ -0.06
SMARCA2-260ENST00000637352 DIP2BQ9P265 1576 aa14.66□□□□□ -0.06
SMARCA2-260ENST00000637352 ADCY10Q96PN6 1610 aa14.66□□□□□ -0.06
SMARCA2-260ENST00000637352 MAPKBP1O60336 1514 aa14.64□□□□□ -0.07
SMARCA2-260ENST00000637352 KDM6BO15054 1643 aa14.63□□□□□ -0.07
SMARCA2-260ENST00000637352 TSPOAP1O95153 1857 aa14.63□□□□□ -0.07
SMARCA2-260ENST00000637352 IGF1RP08069 1367 aa14.6□□□□□ -0.07
SMARCA2-260ENST00000637352 ILDR1Q86SU0 546 aaPredicted RBP14.59□□□□□ -0.07
SMARCA2-260ENST00000637352 KIAA0586Q9BVV6 1533 aa14.59□□□□□ -0.07
SMARCA2-260ENST00000637352 PTPRGP23470 1445 aa14.58□□□□□ -0.08
SMARCA2-260ENST00000637352 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
SMARCA2-260ENST00000637352 CARMIL1Q5VZK9 1371 aa14.51□□□□□ -0.09
SMARCA2-260ENST00000637352 ASXL2Q76L83 1435 aa14.5□□□□□ -0.09
SMARCA2-260ENST00000637352 TNIKQ9UKE5 1360 aa14.5□□□□□ -0.09
SMARCA2-260ENST00000637352 ABCC2Q92887 1545 aa14.48□□□□□ -0.09
SMARCA2-260ENST00000637352 CARMIL2Q6F5E8 1435 aa14.48□□□□□ -0.09
SMARCA2-260ENST00000637352 CUL7Q14999 1698 aa14.47□□□□□ -0.09
SMARCA2-260ENST00000637352 ADGRL1O94910 1474 aa14.46□□□□□ -0.09
SMARCA2-260ENST00000637352 COL17A1Q9UMD9 1497 aaPredicted RBP14.45□□□□□ -0.1
SMARCA2-260ENST00000637352 PLB1Q6P1J6 1458 aa14.44□□□□□ -0.1
SMARCA2-260ENST00000637352 UACAQ9BZF9 1416 aa14.43□□□□□ -0.1
SMARCA2-260ENST00000637352 PPRC1Q5VV67 1664 aaKnown RBP14.42□□□□□ -0.1
SMARCA2-260ENST00000637352 GLI2P10070 1586 aa14.4□□□□□ -0.1
SMARCA2-260ENST00000637352 IQGAP2Q13576 1575 aa14.4□□□□□ -0.1
SMARCA2-260ENST00000637352 EPRSP07814 1512 aaKnown RBP14.4□□□□□ -0.1
SMARCA2-260ENST00000637352 DISP1Q96F81 1524 aa14.39□□□□□ -0.11
SMARCA2-260ENST00000637352 UHRF1BP1LA0JNW5 1464 aa14.38□□□□□ -0.11
SMARCA2-260ENST00000637352 KCNH8Q96L42 1107 aa14.36□□□□□ -0.11
SMARCA2-260ENST00000637352 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
SMARCA2-260ENST00000637352 KDM5BQ9UGL1 1544 aa14.34□□□□□ -0.11
SMARCA2-260ENST00000637352 ZCCHC11Q5TAX3 1644 aaKnown RBP14.33□□□□□ -0.12
SMARCA2-260ENST00000637352 TEX14Q8IWB6 1497 aa14.32□□□□□ -0.12
SMARCA2-260ENST00000637352 MAP3K4Q9Y6R4 1608 aa14.32□□□□□ -0.12
SMARCA2-260ENST00000637352 ARID3CA6NKF2 412 aa14.31□□□□□ -0.12
SMARCA2-260ENST00000637352 RAPGEF2Q9Y4G8 1499 aa14.3□□□□□ -0.12
SMARCA2-260ENST00000637352 UGGT2Q9NYU1 1516 aa14.29□□□□□ -0.12
SMARCA2-260ENST00000637352 KIAA0556O60303 1618 aa14.28□□□□□ -0.12
SMARCA2-260ENST00000637352 WDR7Q9Y4E6 1490 aa14.28□□□□□ -0.12
SMARCA2-260ENST00000637352 CD109Q6YHK3 1445 aa14.27□□□□□ -0.12
SMARCA2-260ENST00000637352 P3H3Q8IVL6 736 aa14.24□□□□□ -0.13
SMARCA2-260ENST00000637352 MAGI3Q5TCQ9 1506 aa14.2□□□□□ -0.14
SMARCA2-260ENST00000637352 KIF21BO75037 1637 aa14.18□□□□□ -0.14
SMARCA2-260ENST00000637352 ABCA8O94911 1581 aa14.17□□□□□ -0.14
SMARCA2-260ENST00000637352 RAPGEF3O95398 923 aa14.16□□□□□ -0.14
SMARCA2-260ENST00000637352 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
SMARCA2-260ENST00000637352 CFAP43Q8NDM7 1665 aa14.14□□□□□ -0.15
SMARCA2-260ENST00000637352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
SMARCA2-260ENST00000637352 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
SMARCA2-260ENST00000637352 PLPPR3Q6T4P5 718 aa14.14□□□□□ -0.15
SMARCA2-260ENST00000637352 FBXO41Q8TF61 875 aa14.14□□□□□ -0.15
SMARCA2-260ENST00000637352 RANGAP1P46060 587 aaPredicted RBP14.13□□□□□ -0.15
SMARCA2-260ENST00000637352 ARID4BQ4LE39 1312 aaPredicted RBP14.13□□□□□ -0.15
SMARCA2-260ENST00000637352 CTTNBP2Q8WZ74 1663 aa14.12□□□□□ -0.15
SMARCA2-260ENST00000637352 ATP10BO94823 1461 aa14.11□□□□□ -0.15
SMARCA2-260ENST00000637352 FAM9AQ8IZU1 332 aaPredicted RBP14.09□□□□□ -0.15
SMARCA2-260ENST00000637352 PTPRMP28827 1452 aa14.09□□□□□ -0.15
SMARCA2-260ENST00000637352 ARAP3Q8WWN8 1544 aa14.08□□□□□ -0.16
SMARCA2-260ENST00000637352 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
SMARCA2-260ENST00000637352 HSPA2P54652 639 aa14.04□□□□□ -0.16
SMARCA2-260ENST00000637352 ADAMTSL3P82987 1691 aa14.02□□□□□ -0.16
SMARCA2-260ENST00000637352 ABCA9Q8IUA7 1624 aa14.01□□□□□ -0.17
SMARCA2-260ENST00000637352 MLECQ14165 292 aa14□□□□□ -0.17
SMARCA2-260ENST00000637352 MADDQ8WXG6 1647 aa14□□□□□ -0.17
SMARCA2-260ENST00000637352 PHLDB1Q86UU1 1377 aa13.99□□□□□ -0.17
SMARCA2-260ENST00000637352 FRMPD1Q5SYB0 1578 aa13.98□□□□□ -0.17
SMARCA2-260ENST00000637352 NEO1Q92859 1461 aa13.98□□□□□ -0.17
SMARCA2-260ENST00000637352 LMTK3Q96Q04 1460 aa13.98□□□□□ -0.17
SMARCA2-260ENST00000637352 PCF11O94913 1555 aaKnown RBP13.97□□□□□ -0.17
SMARCA2-260ENST00000637352 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
SMARCA2-260ENST00000637352 BCORL1Q5H9F3 1711 aa13.97□□□□□ -0.17
SMARCA2-260ENST00000637352 RAPGEF6Q8TEU7 1601 aa13.97□□□□□ -0.17
SMARCA2-260ENST00000637352 FHOD3Q2V2M9 1422 aa13.96□□□□□ -0.18
SMARCA2-260ENST00000637352 PLEKHD1A6NEE1 506 aa13.95□□□□□ -0.18
SMARCA2-260ENST00000637352 RIMS1Q86UR5 1692 aaKnown RBP13.95□□□□□ -0.18
SMARCA2-260ENST00000637352 DENND4BO75064 1496 aaPredicted RBP13.94□□□□□ -0.18
SMARCA2-260ENST00000637352 NUP153P49790 1475 aaKnown RBP13.94□□□□□ -0.18
SMARCA2-260ENST00000637352 AKNAQ7Z591 1439 aa13.93□□□□□ -0.18
SMARCA2-260ENST00000637352 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
SMARCA2-260ENST00000637352 SAMD9Q5K651 1589 aa13.92□□□□□ -0.18
SMARCA2-260ENST00000637352 YEATS2Q9ULM3 1422 aa13.91□□□□□ -0.18
SMARCA2-260ENST00000637352 FANCAO15360 1455 aa13.9□□□□□ -0.18
SMARCA2-260ENST00000637352 ARHGEF40Q8TER5 1519 aa13.9□□□□□ -0.19
SMARCA2-260ENST00000637352 CERKQ8TCT0 537 aa13.89□□□□□ -0.19
SMARCA2-260ENST00000637352 ATP1B4Q9UN42 357 aaPredicted RBP13.89□□□□□ -0.19
SMARCA2-260ENST00000637352 CEBPAP49715 358 aaPredicted RBP13.88□□□□□ -0.19
SMARCA2-260ENST00000637352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMARCA2-260ENST00000637352 POGZQ7Z3K3 1410 aa13.87□□□□□ -0.19
SMARCA2-260ENST00000637352 RICTORQ6R327 1708 aa13.86□□□□□ -0.19
SMARCA2-260ENST00000637352 SIGLEC1Q9BZZ2 1709 aa13.86□□□□□ -0.19
SMARCA2-260ENST00000637352 ZFYVE16Q7Z3T8 1539 aa13.85□□□□□ -0.19
SMARCA2-260ENST00000637352 TTC37Q6PGP7 1564 aa13.84□□□□□ -0.19
SMARCA2-260ENST00000637352 SCAPERQ9BY12 1400 aa13.84□□□□□ -0.19
SMARCA2-260ENST00000637352 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
SMARCA2-260ENST00000637352 CDK13Q14004 1512 aaKnown RBP13.83□□□□□ -0.2
SMARCA2-260ENST00000637352 HECW1Q76N89 1606 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms