RNA–Protein interactions for RNA: ENST00000637301.1

CACNA1D-223, Transcript of calcium voltage-gated channel subunit alpha1 D, human

TSL 5

Gene CACNA1D, Length 216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1D-223	ENST00000637301	NACAD	O15069	1562 aa		5.09	□□□□□ -1.59
CACNA1D-223	ENST00000637301	RBM10	P98175	930 aa	Known RBP	5.09	□□□□□ -1.59
CACNA1D-223	ENST00000637301	PDE4C	Q08493	712 aa		5.09	□□□□□ -1.59
CACNA1D-223	ENST00000637301	BRPF3	Q9ULD4	1205 aa		5.09	□□□□□ -1.59
CACNA1D-223	ENST00000637301	EIF4G1	Q04637	1599 aa	Known RBP	5.08	□□□□□ -1.6
CACNA1D-223	ENST00000637301	RNF123	Q5XPI4	1314 aa		5.08	□□□□□ -1.6
CACNA1D-223	ENST00000637301	CALD1	Q05682	793 aa	Known RBP	5.08	□□□□□ -1.6
CACNA1D-223	ENST00000637301	NEFM	P07197	916 aa		5.07	□□□□□ -1.6
CACNA1D-223	ENST00000637301	PDIA4	P13667	645 aa	Known RBP	5.07	□□□□□ -1.6
CACNA1D-223	ENST00000637301	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.06	□□□□□ -1.6
CACNA1D-223	ENST00000637301	PRDM4	Q9UKN5	801 aa		5.06	□□□□□ -1.6
CACNA1D-223	ENST00000637301	ANP32C	O43423	234 aa		5.05	□□□□□ -1.6
CACNA1D-223	ENST00000637301	HNRNPUL2	Q1KMD3	747 aa	Known RBP	5.05	□□□□□ -1.6
CACNA1D-223	ENST00000637301	CEP164	Q9UPV0	1460 aa		5.05	□□□□□ -1.6
CACNA1D-223	ENST00000637301	VPS8	Q8N3P4	1428 aa		5.05	□□□□□ -1.6
CACNA1D-223	ENST00000637301	SMARCA2	P51531	1590 aa		5.04	□□□□□ -1.6
CACNA1D-223	ENST00000637301	MS4A1	P11836	297 aa		5.04	□□□□□ -1.6
CACNA1D-223	ENST00000637301	GOLGA3	Q08378	1498 aa		5.04	□□□□□ -1.6
CACNA1D-223	ENST00000637301	RRBP1	Q9P2E9	1410 aa	Known RBP	5.04	□□□□□ -1.6
CACNA1D-223	ENST00000637301	TCERG1	O14776	1098 aa	Known RBP	5.03	□□□□□ -1.6
CACNA1D-223	ENST00000637301	CLCN1	P35523	988 aa		5.03	□□□□□ -1.6
CACNA1D-223	ENST00000637301	TRIM52	Q96A61	297 aa		5.03	□□□□□ -1.6
CACNA1D-223	ENST00000637301	HSP90AA1	P07900	732 aa	Known RBP	5.02	□□□□□ -1.61
CACNA1D-223	ENST00000637301	DDX10	Q13206	875 aa	Known RBP	5.02	□□□□□ -1.61
CACNA1D-223	ENST00000637301	TAF7L	Q5H9L4	462 aa		5.02	□□□□□ -1.61
CACNA1D-223	ENST00000637301	FRAT1	Q92837	279 aa	Predicted RBP	5.02	□□□□□ -1.61
CACNA1D-223	ENST00000637301	DDRGK1	Q96HY6	314 aa		5.02	□□□□□ -1.61
CACNA1D-223	ENST00000637301	PDCL3	Q9H2J4	239 aa		5.02	□□□□□ -1.61
CACNA1D-223	ENST00000637301	CLIP1	P30622	1438 aa		5.02	□□□□□ -1.61
CACNA1D-223	ENST00000637301	MAPKBP1	O60336	1514 aa		5.02	□□□□□ -1.61
CACNA1D-223	ENST00000637301	ZBED9	Q6R2W3	1325 aa		5.01	□□□□□ -1.61
CACNA1D-223	ENST00000637301	NFKBIB	Q15653	356 aa		5.01	□□□□□ -1.61
CACNA1D-223	ENST00000637301	ARX	Q96QS3	562 aa		5.01	□□□□□ -1.61
CACNA1D-223	ENST00000637301	RRAGD	Q9NQL2	400 aa	Predicted RBP	5.01	□□□□□ -1.61
CACNA1D-223	ENST00000637301	SMG6	Q86US8	1419 aa	Known RBP	5	□□□□□ -1.61
CACNA1D-223	ENST00000637301	TPM2	P07951	284 aa		5	□□□□□ -1.61
CACNA1D-223	ENST00000637301	NCBP3	Q53F19	620 aa	Known RBP	5	□□□□□ -1.61
CACNA1D-223	ENST00000637301	RSPH4A	Q5TD94	716 aa		5	□□□□□ -1.61
CACNA1D-223	ENST00000637301	B4GALNT3	Q6L9W6	998 aa		5	□□□□□ -1.61
CACNA1D-223	ENST00000637301	DCAF11	Q8TEB1	546 aa		5	□□□□□ -1.61
CACNA1D-223	ENST00000637301	BACH2	Q9BYV9	841 aa		5	□□□□□ -1.61
CACNA1D-223	ENST00000637301	BAZ1B	Q9UIG0	1483 aa	Known RBP	5	□□□□□ -1.61
CACNA1D-223	ENST00000637301	PEG3	Q9GZU2	1588 aa		4.99	□□□□□ -1.61
CACNA1D-223	ENST00000637301	KIF21B	O75037	1637 aa		4.99	□□□□□ -1.61
CACNA1D-223	ENST00000637301	RANGAP1	P46060	587 aa	Predicted RBP	4.99	□□□□□ -1.61
CACNA1D-223	ENST00000637301	ZNF326	Q5BKZ1	582 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1D-223	ENST00000637301	L1TD1	Q5T7N2	865 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1D-223	ENST00000637301	BCL11B	Q9C0K0	894 aa	Predicted RBP	4.99	□□□□□ -1.61
CACNA1D-223	ENST00000637301	WDR97	A6NE52	1622 aa		4.98	□□□□□ -1.61
CACNA1D-223	ENST00000637301	TERF1	P54274	439 aa		4.98	□□□□□ -1.61
CACNA1D-223	ENST00000637301	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
CACNA1D-223	ENST00000637301	MAP7D2	Q96T17	732 aa		4.98	□□□□□ -1.61
CACNA1D-223	ENST00000637301	NCL	P19338	710 aa	Known RBP	4.97	□□□□□ -1.61
CACNA1D-223	ENST00000637301	PDE4A	P27815	886 aa		4.97	□□□□□ -1.61
CACNA1D-223	ENST00000637301	UTP14C	Q5TAP6	766 aa	Known RBP	4.97	□□□□□ -1.61
CACNA1D-223	ENST00000637301	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.97	□□□□□ -1.61
CACNA1D-223	ENST00000637301	PNN	Q9H307	717 aa	Known RBP	4.97	□□□□□ -1.61
CACNA1D-223	ENST00000637301		A0A0U1RQG5	324 aa	Predicted RBP	4.96	□□□□□ -1.62
CACNA1D-223	ENST00000637301	VGF	O15240	615 aa	Predicted RBP	4.96	□□□□□ -1.62
CACNA1D-223	ENST00000637301	IRX6	P78412	446 aa	Predicted RBP	4.96	□□□□□ -1.62
CACNA1D-223	ENST00000637301	LAS1L	Q9Y4W2	734 aa	Known RBP	4.96	□□□□□ -1.62
CACNA1D-223	ENST00000637301	CCDC88B	A6NC98	1476 aa		4.95	□□□□□ -1.62
CACNA1D-223	ENST00000637301	NCOA2	Q15596	1464 aa		4.95	□□□□□ -1.62
CACNA1D-223	ENST00000637301	FSD2	A1L4K1	749 aa		4.95	□□□□□ -1.62
CACNA1D-223	ENST00000637301	IPO4	Q8TEX9	1081 aa	Known RBP	4.95	□□□□□ -1.62
CACNA1D-223	ENST00000637301	EHMT2	Q96KQ7	1210 aa		4.95	□□□□□ -1.62
CACNA1D-223	ENST00000637301	SOGA1	O94964	1423 aa		4.95	□□□□□ -1.62
CACNA1D-223	ENST00000637301	GTF2E1	P29083	439 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA1D-223	ENST00000637301	FHAD1	B1AJZ9	1412 aa		4.94	□□□□□ -1.62
CACNA1D-223	ENST00000637301	ABCC8	Q09428	1581 aa		4.94	□□□□□ -1.62
CACNA1D-223	ENST00000637301	STAC3	Q96MF2	364 aa		4.93	□□□□□ -1.62
CACNA1D-223	ENST00000637301	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.93	□□□□□ -1.62
CACNA1D-223	ENST00000637301	ISY1	Q9ULR0	285 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1D-223	ENST00000637301	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.93	□□□□□ -1.62
CACNA1D-223	ENST00000637301	NUDC	Q9Y266	331 aa		4.93	□□□□□ -1.62
CACNA1D-223	ENST00000637301	CCNB3	Q8WWL7	1395 aa		4.92	□□□□□ -1.62
CACNA1D-223	ENST00000637301	SETD5	Q9C0A6	1442 aa		4.92	□□□□□ -1.62
CACNA1D-223	ENST00000637301	CHRM1	P11229	460 aa	Predicted RBP	4.92	□□□□□ -1.62
CACNA1D-223	ENST00000637301	MTERF4	Q7Z6M4	381 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1D-223	ENST00000637301	RAB3GAP2	Q9H2M9	1393 aa		4.91	□□□□□ -1.62
CACNA1D-223	ENST00000637301	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	4.91	□□□□□ -1.62
CACNA1D-223	ENST00000637301	UBTF	P17480	764 aa	Known RBP	4.91	□□□□□ -1.62
CACNA1D-223	ENST00000637301	MAP3K1	Q13233	1512 aa		4.91	□□□□□ -1.62
CACNA1D-223	ENST00000637301	RGS3	P49796	1198 aa		4.9	□□□□□ -1.63
CACNA1D-223	ENST00000637301	BBX	Q8WY36	941 aa	Predicted RBP	4.9	□□□□□ -1.63
CACNA1D-223	ENST00000637301	CNTLN	Q9NXG0	1405 aa		4.89	□□□□□ -1.63
CACNA1D-223	ENST00000637301	FRAT2	O75474	233 aa	Predicted RBP	4.89	□□□□□ -1.63
CACNA1D-223	ENST00000637301	KIF20A	O95235	890 aa		4.89	□□□□□ -1.63
CACNA1D-223	ENST00000637301	XRCC6	P12956	609 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
CACNA1D-223	ENST00000637301	CANX	P27824	592 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1D-223	ENST00000637301	DMTN	Q08495	405 aa		4.89	□□□□□ -1.63
CACNA1D-223	ENST00000637301	KLHL34	Q8N239	644 aa		4.89	□□□□□ -1.63
CACNA1D-223	ENST00000637301	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
CACNA1D-223	ENST00000637301	RUSC2	Q8N2Y8	1516 aa		4.88	□□□□□ -1.63
CACNA1D-223	ENST00000637301	KDM5B	Q9UGL1	1544 aa		4.88	□□□□□ -1.63
CACNA1D-223	ENST00000637301	SYNJ1	O43426	1573 aa		4.88	□□□□□ -1.63
CACNA1D-223	ENST00000637301	MROH2B	Q7Z745	1585 aa		4.88	□□□□□ -1.63
CACNA1D-223	ENST00000637301	ESPN	B1AK53	854 aa		4.88	□□□□□ -1.63
CACNA1D-223	ENST00000637301	TAF3	Q5VWG9	929 aa		4.88	□□□□□ -1.63
CACNA1D-223	ENST00000637301	GTPBP4	Q9BZE4	634 aa	Known RBP	4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms