RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 NPM1P06748 294 aaKnown RBP eCLIP32.02■■■□□ 2.72
CTSD-209ENST00000637158 KIF27Q86VH2 1401 aa32■■■□□ 2.71
CTSD-209ENST00000637158 IGF1RP08069 1367 aa31.97■■■□□ 2.71
CTSD-209ENST00000637158 KIAA0586Q9BVV6 1533 aa31.95■■■□□ 2.7
CTSD-209ENST00000637158 CUL7Q14999 1698 aa31.9■■■□□ 2.7
CTSD-209ENST00000637158 KIF13AQ9H1H9 1805 aa31.9■■■□□ 2.7
CTSD-209ENST00000637158 FAM69CQ0P6D2 419 aa31.87■■■□□ 2.69
CTSD-209ENST00000637158 ABCC10Q5T3U5 1492 aa31.85■■■□□ 2.69
CTSD-209ENST00000637158 MAPKBP1O60336 1514 aa31.85■■■□□ 2.69
CTSD-209ENST00000637158 CARMIL1Q5VZK9 1371 aa31.78■■■□□ 2.68
CTSD-209ENST00000637158 ADCY10Q96PN6 1610 aa31.77■■■□□ 2.68
CTSD-209ENST00000637158 DIP2BQ9P265 1576 aa31.7■■■□□ 2.67
CTSD-209ENST00000637158 PTPRGP23470 1445 aa31.7■■■□□ 2.67
CTSD-209ENST00000637158 CARMIL2Q6F5E8 1435 aa31.69■■■□□ 2.66
CTSD-209ENST00000637158 TNIKQ9UKE5 1360 aa31.63■■■□□ 2.65
CTSD-209ENST00000637158 IQGAP2Q13576 1575 aa31.56■■■□□ 2.64
CTSD-209ENST00000637158 TTBK1Q5TCY1 1321 aaPredicted RBP31.55■■■□□ 2.64
CTSD-209ENST00000637158 ABCC2Q92887 1545 aa31.53■■■□□ 2.64
CTSD-209ENST00000637158 KDM6BO15054 1643 aa31.5■■■□□ 2.63
CTSD-209ENST00000637158 UHRF1BP1LA0JNW5 1464 aa31.47■■■□□ 2.63
CTSD-209ENST00000637158 PLB1Q6P1J6 1458 aa31.46■■■□□ 2.63
CTSD-209ENST00000637158 RAPGEF2Q9Y4G8 1499 aa31.46■■■□□ 2.63
CTSD-209ENST00000637158 UACAQ9BZF9 1416 aa31.45■■■□□ 2.63
CTSD-209ENST00000637158 TSPOAP1O95153 1857 aa31.44■■■□□ 2.62
CTSD-209ENST00000637158 ASXL2Q76L83 1435 aa31.43■■■□□ 2.62
CTSD-209ENST00000637158 DISP1Q96F81 1524 aa31.41■■■□□ 2.62
CTSD-209ENST00000637158 GLI2P10070 1586 aa31.38■■■□□ 2.61
CTSD-209ENST00000637158 UGGT2Q9NYU1 1516 aa31.37■■■□□ 2.61
CTSD-209ENST00000637158 KDM5BQ9UGL1 1544 aa31.31■■■□□ 2.6
CTSD-209ENST00000637158 KDM4FA0A1W2PPD8 638 aa31.29■■■□□ 2.6
CTSD-209ENST00000637158 KIAA0556O60303 1618 aa31.26■■■□□ 2.59
CTSD-209ENST00000637158 EPRSP07814 1512 aaKnown RBP31.24■■■□□ 2.59
CTSD-209ENST00000637158 PPRC1Q5VV67 1664 aaKnown RBP31.19■■■□□ 2.58
CTSD-209ENST00000637158 GOLGA3Q08378 1498 aa31.18■■■□□ 2.58
CTSD-209ENST00000637158 TEX14Q8IWB6 1497 aa31.18■■■□□ 2.58
CTSD-209ENST00000637158 ZCCHC11Q5TAX3 1644 aaKnown RBP31.17■■■□□ 2.58
CTSD-209ENST00000637158 MAP3K4Q9Y6R4 1608 aa31.14■■■□□ 2.58
CTSD-209ENST00000637158 CTTNBP2Q8WZ74 1663 aa31.11■■■□□ 2.57
CTSD-209ENST00000637158 WDR7Q9Y4E6 1490 aa31.1■■■□□ 2.57
CTSD-209ENST00000637158 FAM9AQ8IZU1 332 aaPredicted RBP31.08■■■□□ 2.57
CTSD-209ENST00000637158 PRXQ9BXM0 1461 aa31.06■■■□□ 2.56
CTSD-209ENST00000637158 COL17A1Q9UMD9 1497 aaPredicted RBP31.05■■■□□ 2.56
CTSD-209ENST00000637158 ABCA8O94911 1581 aa30.99■■■□□ 2.55
CTSD-209ENST00000637158 ADGRL1O94910 1474 aa30.97■■■□□ 2.55
CTSD-209ENST00000637158 CD109Q6YHK3 1445 aa30.97■■■□□ 2.55
CTSD-209ENST00000637158 KCNH8Q96L42 1107 aa30.96■■■□□ 2.55
CTSD-209ENST00000637158 MAGI3Q5TCQ9 1506 aa30.93■■■□□ 2.54
CTSD-209ENST00000637158 CFAP43Q8NDM7 1665 aa30.9■■■□□ 2.54
CTSD-209ENST00000637158 CSRNP3Q8WYN3 585 aa30.84■■■□□ 2.53
CTSD-209ENST00000637158 P3H3Q8IVL6 736 aa30.8■■■□□ 2.52
CTSD-209ENST00000637158 ATP10BO94823 1461 aa30.76■■■□□ 2.52
CTSD-209ENST00000637158 PHLDB1Q86UU1 1377 aa30.73■■■□□ 2.51
CTSD-209ENST00000637158 ARID3CA6NKF2 412 aa30.72■■■□□ 2.51
CTSD-209ENST00000637158 ARAP3Q8WWN8 1544 aa30.71■■■□□ 2.51
CTSD-209ENST00000637158 EEA1Q15075 1411 aa30.69■■■□□ 2.5
CTSD-209ENST00000637158 SAMD9Q5K651 1589 aa30.69■■■□□ 2.5
CTSD-209ENST00000637158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.65■■■□□ 2.5
CTSD-209ENST00000637158 HNRNPUL2Q1KMD3 747 aaKnown RBP30.65■■■□□ 2.5
CTSD-209ENST00000637158 ABCA9Q8IUA7 1624 aa30.62■■■□□ 2.49
CTSD-209ENST00000637158 RAPGEF6Q8TEU7 1601 aa30.62■■■□□ 2.49
CTSD-209ENST00000637158 HECW2Q9P2P5 1572 aa30.58■■■□□ 2.49
CTSD-209ENST00000637158 NEO1Q92859 1461 aa30.57■■■□□ 2.48
CTSD-209ENST00000637158 ILDR1Q86SU0 546 aaPredicted RBP30.53■■■□□ 2.48
CTSD-209ENST00000637158 KIF21BO75037 1637 aa30.52■■■□□ 2.48
CTSD-209ENST00000637158 NUP153P49790 1475 aaKnown RBP30.51■■■□□ 2.48
CTSD-209ENST00000637158 RANGAP1P46060 587 aaPredicted RBP30.51■■■□□ 2.47
CTSD-209ENST00000637158 PLEKHD1A6NEE1 506 aa30.5■■■□□ 2.47
CTSD-209ENST00000637158 RAPGEF3O95398 923 aa30.5■■■□□ 2.47
CTSD-209ENST00000637158 FHOD3Q2V2M9 1422 aa30.47■■■□□ 2.47
CTSD-209ENST00000637158 EFCAB5A4FU69 1503 aa30.41■■■□□ 2.46
CTSD-209ENST00000637158 ARID4BQ4LE39 1312 aaPredicted RBP30.35■■■□□ 2.45
CTSD-209ENST00000637158 DENND4BO75064 1496 aaPredicted RBP30.34■■■□□ 2.45
CTSD-209ENST00000637158 PTPRMP28827 1452 aa30.34■■■□□ 2.45
CTSD-209ENST00000637158 ADAMTSL3P82987 1691 aa30.33■■■□□ 2.45
CTSD-209ENST00000637158 AKNAQ7Z591 1439 aa30.32■■■□□ 2.44
CTSD-209ENST00000637158 FRMPD1Q5SYB0 1578 aa30.31■■■□□ 2.44
CTSD-209ENST00000637158 FANCAO15360 1455 aa30.3■■■□□ 2.44
CTSD-209ENST00000637158 CFAP74Q9C0B2 1584 aa30.29■■■□□ 2.44
CTSD-209ENST00000637158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.27■■■□□ 2.44
CTSD-209ENST00000637158 BCORL1Q5H9F3 1711 aa30.25■■■□□ 2.43
CTSD-209ENST00000637158 UBTFP17480 764 aaKnown RBP30.23■■■□□ 2.43
CTSD-209ENST00000637158 ARHGEF40Q8TER5 1519 aa30.22■■■□□ 2.43
CTSD-209ENST00000637158 RICTORQ6R327 1708 aa30.21■■■□□ 2.43
CTSD-209ENST00000637158 FMN1Q68DA7 1419 aa30.2■■■□□ 2.42
CTSD-209ENST00000637158 POGZQ7Z3K3 1410 aa30.19■■■□□ 2.42
CTSD-209ENST00000637158 CDK11AQ9UQ88 783 aaPredicted RBP30.18■■■□□ 2.42
CTSD-209ENST00000637158 TTC37Q6PGP7 1564 aa30.18■■■□□ 2.42
CTSD-209ENST00000637158 MAGI2Q86UL8 1455 aa30.18■■■□□ 2.42
CTSD-209ENST00000637158 MADDQ8WXG6 1647 aa30.17■■■□□ 2.42
CTSD-209ENST00000637158 ZMYM4Q5VZL5 1548 aa30.16■■■□□ 2.42
CTSD-209ENST00000637158 PLCH2O75038 1416 aa30.15■■■□□ 2.42
CTSD-209ENST00000637158 ATP1B4Q9UN42 357 aaPredicted RBP30.15■■■□□ 2.42
CTSD-209ENST00000637158 CDK13Q14004 1512 aaKnown RBP30.15■■■□□ 2.42
CTSD-209ENST00000637158 ZFYVE16Q7Z3T8 1539 aa30.12■■■□□ 2.41
CTSD-209ENST00000637158 SCAPERQ9BY12 1400 aa30.1■■■□□ 2.41
CTSD-209ENST00000637158 PCF11O94913 1555 aaKnown RBP30.09■■■□□ 2.41
CTSD-209ENST00000637158 EFCAB2Q5VUJ9 269 aa30.09■■■□□ 2.41
CTSD-209ENST00000637158 HECW1Q76N89 1606 aa30.09■■■□□ 2.41
CTSD-209ENST00000637158 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
CTSD-209ENST00000637158 FBXO41Q8TF61 875 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms