RNA–Protein interactions for RNA: ENST00000636830.1

CLCN2-216, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 2

Gene CLCN2, Length 3,236 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-216ENST00000636830 TIAM1Q13009 1591 aa13.93□□□□□ -0.18
CLCN2-216ENST00000636830 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
CLCN2-216ENST00000636830 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
CLCN2-216ENST00000636830 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
CLCN2-216ENST00000636830 PCF11O94913 1555 aaKnown RBP13.88□□□□□ -0.19
CLCN2-216ENST00000636830 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
CLCN2-216ENST00000636830 CFAP43Q8NDM7 1665 aa13.88□□□□□ -0.19
CLCN2-216ENST00000636830 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLCN2-216ENST00000636830 FHOD3Q2V2M9 1422 aa13.87□□□□□ -0.19
CLCN2-216ENST00000636830 LRRC9Q6ZRR7 1453 aa13.87□□□□□ -0.19
CLCN2-216ENST00000636830 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
CLCN2-216ENST00000636830 P3H3Q8IVL6 736 aa13.86□□□□□ -0.19
CLCN2-216ENST00000636830 FMN1Q68DA7 1419 aa13.85□□□□□ -0.19
CLCN2-216ENST00000636830 CASKIN1Q8WXD9 1431 aa13.85□□□□□ -0.19
CLCN2-216ENST00000636830 PBRM1Q86U86 1689 aa13.83□□□□□ -0.19
CLCN2-216ENST00000636830 CLSPNQ9HAW4 1339 aa13.82□□□□□ -0.2
CLCN2-216ENST00000636830 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
CLCN2-216ENST00000636830 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
CLCN2-216ENST00000636830 WDR62O43379 1518 aa13.8□□□□□ -0.2
CLCN2-216ENST00000636830 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
CLCN2-216ENST00000636830 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
CLCN2-216ENST00000636830 ADAMTS12P58397 1594 aa13.78□□□□□ -0.2
CLCN2-216ENST00000636830 DHX57Q6P158 1386 aaKnown RBP13.77□□□□□ -0.21
CLCN2-216ENST00000636830 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
CLCN2-216ENST00000636830 PHLDB1Q86UU1 1377 aa13.76□□□□□ -0.21
CLCN2-216ENST00000636830 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
CLCN2-216ENST00000636830 ERCC6Q03468 1493 aa13.73□□□□□ -0.21
CLCN2-216ENST00000636830 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
CLCN2-216ENST00000636830 ITGAEP38570 1179 aa13.73□□□□□ -0.21
CLCN2-216ENST00000636830 IQGAP2Q13576 1575 aa13.73□□□□□ -0.21
CLCN2-216ENST00000636830 DIEXFQ68CQ4 756 aaKnown RBP13.72□□□□□ -0.21
CLCN2-216ENST00000636830 MTUS2Q5JR59 1369 aa13.7□□□□□ -0.22
CLCN2-216ENST00000636830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLCN2-216ENST00000636830 FAM50AQ14320 339 aaKnown RBP13.7□□□□□ -0.22
CLCN2-216ENST00000636830 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
CLCN2-216ENST00000636830 SETD5Q9C0A6 1442 aa13.68□□□□□ -0.22
CLCN2-216ENST00000636830 RAB3GAP2Q9H2M9 1393 aa13.67□□□□□ -0.22
CLCN2-216ENST00000636830 CCDC18Q5T9S5 1454 aa13.67□□□□□ -0.22
CLCN2-216ENST00000636830 AEBP2Q6ZN18 517 aaPredicted RBP13.67□□□□□ -0.22
CLCN2-216ENST00000636830 EIF4G3O43432 1585 aaKnown RBP13.66□□□□□ -0.22
CLCN2-216ENST00000636830 LRRIQ1Q96JM4 1722 aa13.66□□□□□ -0.22
CLCN2-216ENST00000636830 EHBP1L1Q8N3D4 1523 aa13.66□□□□□ -0.22
CLCN2-216ENST00000636830 HECW1Q76N89 1606 aa13.65□□□□□ -0.22
CLCN2-216ENST00000636830 UGGT2Q9NYU1 1516 aa13.65□□□□□ -0.22
CLCN2-216ENST00000636830 FGD6Q6ZV73 1430 aa13.65□□□□□ -0.22
CLCN2-216ENST00000636830 SUPT6HQ7KZ85 1726 aaKnown RBP13.64□□□□□ -0.23
CLCN2-216ENST00000636830 KIAA0586Q9BVV6 1533 aa13.63□□□□□ -0.23
CLCN2-216ENST00000636830 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
CLCN2-216ENST00000636830 MAGI1Q96QZ7 1491 aaPredicted RBP13.62□□□□□ -0.23
CLCN2-216ENST00000636830 NCOA2Q15596 1464 aa13.62□□□□□ -0.23
CLCN2-216ENST00000636830 MYOM3Q5VTT5 1437 aa13.6□□□□□ -0.23
CLCN2-216ENST00000636830 EPRSP07814 1512 aaKnown RBP13.59□□□□□ -0.23
CLCN2-216ENST00000636830 KIAA0556O60303 1618 aa13.58□□□□□ -0.24
CLCN2-216ENST00000636830 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
CLCN2-216ENST00000636830 ARHGEF11O15085 1522 aa13.56□□□□□ -0.24
CLCN2-216ENST00000636830 MAPKBP1O60336 1514 aa13.56□□□□□ -0.24
CLCN2-216ENST00000636830 CHMP7Q8WUX9 453 aaPredicted RBP13.55□□□□□ -0.24
CLCN2-216ENST00000636830 MAGI3Q5TCQ9 1506 aa13.55□□□□□ -0.24
CLCN2-216ENST00000636830 DISP1Q96F81 1524 aa13.55□□□□□ -0.24
CLCN2-216ENST00000636830 PTPN23Q9H3S7 1636 aa13.53□□□□□ -0.24
CLCN2-216ENST00000636830 HFM1A2PYH4 1435 aa13.52□□□□□ -0.25
CLCN2-216ENST00000636830 CDK13Q14004 1512 aaKnown RBP13.52□□□□□ -0.25
CLCN2-216ENST00000636830 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
CLCN2-216ENST00000636830 TCOF1Q13428 1488 aaKnown RBP13.5□□□□□ -0.25
CLCN2-216ENST00000636830 RAPGEF6Q8TEU7 1601 aa13.5□□□□□ -0.25
CLCN2-216ENST00000636830 MIA2Q96PC5 1412 aa13.49□□□□□ -0.25
CLCN2-216ENST00000636830 NUP160Q12769 1436 aa13.48□□□□□ -0.25
CLCN2-216ENST00000636830 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
CLCN2-216ENST00000636830 PTPRKQ15262 1439 aa13.48□□□□□ -0.25
CLCN2-216ENST00000636830 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
CLCN2-216ENST00000636830 FBLN2P98095 1184 aa13.48□□□□□ -0.25
CLCN2-216ENST00000636830 CDK11AQ9UQ88 783 aaPredicted RBP13.48□□□□□ -0.25
CLCN2-216ENST00000636830 CENPBP07199 599 aaPredicted RBP13.47□□□□□ -0.25
CLCN2-216ENST00000636830 SCAF1Q9H7N4 1312 aaKnown RBP13.47□□□□□ -0.25
CLCN2-216ENST00000636830 NUP153P49790 1475 aaKnown RBP13.47□□□□□ -0.25
CLCN2-216ENST00000636830 NAIPQ13075 1403 aa13.46□□□□□ -0.25
CLCN2-216ENST00000636830 UACAQ9BZF9 1416 aa13.46□□□□□ -0.26
CLCN2-216ENST00000636830 ARID3CA6NKF2 412 aa13.44□□□□□ -0.26
CLCN2-216ENST00000636830 AKNAQ7Z591 1439 aa13.44□□□□□ -0.26
CLCN2-216ENST00000636830 JPH4Q96JJ6 628 aa13.43□□□□□ -0.26
CLCN2-216ENST00000636830 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
CLCN2-216ENST00000636830 NEUROD1Q13562 356 aa13.41□□□□□ -0.26
CLCN2-216ENST00000636830 SIN3AQ96ST3 1273 aa13.41□□□□□ -0.26
CLCN2-216ENST00000636830 MIER1Q8N108 512 aa13.41□□□□□ -0.26
CLCN2-216ENST00000636830 ACIN1Q9UKV3 1341 aaKnown RBP13.41□□□□□ -0.26
CLCN2-216ENST00000636830 TROQ12816 1431 aaPredicted RBP13.4□□□□□ -0.26
CLCN2-216ENST00000636830 PLB1Q6P1J6 1458 aa13.39□□□□□ -0.27
CLCN2-216ENST00000636830 RRP7BPQ9NSQ0 103 aa13.37□□□□□ -0.27
CLCN2-216ENST00000636830 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
CLCN2-216ENST00000636830 ITSN2Q9NZM3 1697 aa13.36□□□□□ -0.27
CLCN2-216ENST00000636830 TONSLQ96HA7 1378 aa13.36□□□□□ -0.27
CLCN2-216ENST00000636830 DNMT1P26358 1616 aaKnown RBP13.35□□□□□ -0.27
CLCN2-216ENST00000636830 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
CLCN2-216ENST00000636830 ROCK1Q13464 1354 aa13.35□□□□□ -0.27
CLCN2-216ENST00000636830 DAPK1P53355 1430 aa13.35□□□□□ -0.27
CLCN2-216ENST00000636830 PRG4Q92954 1404 aaPredicted RBP13.35□□□□□ -0.27
CLCN2-216ENST00000636830 ABCA8O94911 1581 aa13.34□□□□□ -0.27
CLCN2-216ENST00000636830 PPP1R15AO75807 674 aaPredicted RBP13.34□□□□□ -0.27
CLCN2-216ENST00000636830 ABCC5O15440 1437 aa13.31□□□□□ -0.28
CLCN2-216ENST00000636830 TRIM52Q96A61 297 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms