RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
SMARCA2-250ENST00000636367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMARCA2-250ENST00000636367 UBTFP17480 764 aaKnown RBP13.48□□□□□ -0.25
SMARCA2-250ENST00000636367 CAPN15O75808 1086 aa13.46□□□□□ -0.25
SMARCA2-250ENST00000636367 ABCB7O75027 752 aa13.45□□□□□ -0.26
SMARCA2-250ENST00000636367 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMARCA2-250ENST00000636367 STK25O00506 426 aa13.43□□□□□ -0.26
SMARCA2-250ENST00000636367 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
SMARCA2-250ENST00000636367 NEUROD2Q15784 382 aa13.42□□□□□ -0.26
SMARCA2-250ENST00000636367 RIOK3O14730 519 aaKnown RBP13.41□□□□□ -0.26
SMARCA2-250ENST00000636367 P3H3Q8IVL6 736 aa13.41□□□□□ -0.26
SMARCA2-250ENST00000636367 KCNV2Q8TDN2 545 aa13.41□□□□□ -0.26
SMARCA2-250ENST00000636367 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
SMARCA2-250ENST00000636367 TRIM26Q12899 539 aaPredicted RBP13.38□□□□□ -0.27
SMARCA2-250ENST00000636367 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
SMARCA2-250ENST00000636367 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
SMARCA2-250ENST00000636367 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
SMARCA2-250ENST00000636367 SLC24A3Q9HC58 644 aa13.31□□□□□ -0.28
SMARCA2-250ENST00000636367 GSE1Q14687 1217 aa13.31□□□□□ -0.28
SMARCA2-250ENST00000636367 ZC3H15Q8WU90 426 aaKnown RBP13.3□□□□□ -0.28
SMARCA2-250ENST00000636367 CADPS2Q86UW7 1296 aa13.28□□□□□ -0.28
SMARCA2-250ENST00000636367 SPDYE2BA6NHP3 402 aa13.27□□□□□ -0.28
SMARCA2-250ENST00000636367 SPDYE6P0CI01 402 aa13.27□□□□□ -0.28
SMARCA2-250ENST00000636367 SPDYE2Q495Y8 402 aa13.27□□□□□ -0.28
SMARCA2-250ENST00000636367 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
SMARCA2-250ENST00000636367 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
SMARCA2-250ENST00000636367 VGFO15240 615 aaPredicted RBP13.25□□□□□ -0.29
SMARCA2-250ENST00000636367 HRCP23327 699 aa13.24□□□□□ -0.29
SMARCA2-250ENST00000636367 NUBP1P53384 320 aa13.24□□□□□ -0.29
SMARCA2-250ENST00000636367 DCAF8Q5TAQ9 597 aa13.24□□□□□ -0.29
SMARCA2-250ENST00000636367 NPM2Q86SE8 214 aaKnown RBP13.23□□□□□ -0.29
SMARCA2-250ENST00000636367 WDR70Q9NW82 654 aa13.22□□□□□ -0.29
SMARCA2-250ENST00000636367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.21□□□□□ -0.29
SMARCA2-250ENST00000636367 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
SMARCA2-250ENST00000636367 ARID3AQ99856 593 aa13.15□□□□□ -0.3
SMARCA2-250ENST00000636367 RYDENQ9NUL5 291 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-250ENST00000636367 ZMYND15Q9H091 742 aa13.11□□□□□ -0.31
SMARCA2-250ENST00000636367 SEMA3EO15041 775 aa13.08□□□□□ -0.32
SMARCA2-250ENST00000636367 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
SMARCA2-250ENST00000636367 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
SMARCA2-250ENST00000636367 GPBP1L1Q9HC44 474 aaPredicted RBP13.04□□□□□ -0.32
SMARCA2-250ENST00000636367 RNF39Q9H2S5 420 aa13.04□□□□□ -0.32
SMARCA2-250ENST00000636367 C1orf115Q9H7X2 142 aa13.04□□□□□ -0.32
SMARCA2-250ENST00000636367 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
SMARCA2-250ENST00000636367 TESPA1A2RU30 521 aaPredicted RBP13.02□□□□□ -0.33
SMARCA2-250ENST00000636367 ZMYND10O75800 440 aa13.02□□□□□ -0.33
SMARCA2-250ENST00000636367 ARHGEF1Q92888 912 aaKnown RBP13□□□□□ -0.33
SMARCA2-250ENST00000636367 IL27Q8NEV9 243 aa12.98□□□□□ -0.33
SMARCA2-250ENST00000636367 PYGBP11216 843 aa12.97□□□□□ -0.33
SMARCA2-250ENST00000636367 CHRM1P11229 460 aaPredicted RBP12.97□□□□□ -0.33
SMARCA2-250ENST00000636367 RASEFQ8IZ41 740 aa12.95□□□□□ -0.34
SMARCA2-250ENST00000636367 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
SMARCA2-250ENST00000636367 DSG3P32926 999 aa12.91□□□□□ -0.34
SMARCA2-250ENST00000636367 E2F4Q16254 413 aa12.91□□□□□ -0.34
SMARCA2-250ENST00000636367 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
SMARCA2-250ENST00000636367 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
SMARCA2-250ENST00000636367 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
SMARCA2-250ENST00000636367 KDM4CQ9H3R0 1056 aa12.85□□□□□ -0.35
SMARCA2-250ENST00000636367 MKRN3Q13064 507 aaKnown RBP12.85□□□□□ -0.35
SMARCA2-250ENST00000636367 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
SMARCA2-250ENST00000636367 MFRPQ9BY79 579 aa12.82□□□□□ -0.36
SMARCA2-250ENST00000636367 APBB1O00213 710 aa12.81□□□□□ -0.36
SMARCA2-250ENST00000636367 AK7Q96M32 723 aa12.81□□□□□ -0.36
SMARCA2-250ENST00000636367 PPP1R37O75864 691 aa12.8□□□□□ -0.36
SMARCA2-250ENST00000636367 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
SMARCA2-250ENST00000636367 NECTIN2Q92692 538 aa12.78□□□□□ -0.36
SMARCA2-250ENST00000636367 CCDC9Q9Y3X0 531 aaKnown RBP12.75□□□□□ -0.37
SMARCA2-250ENST00000636367 ZBTB7CA1YPR0 619 aa12.74□□□□□ -0.37
SMARCA2-250ENST00000636367 PDIA4P13667 645 aaKnown RBP12.74□□□□□ -0.37
SMARCA2-250ENST00000636367 RBM26Q5T8P6 1007 aaKnown RBP12.74□□□□□ -0.37
SMARCA2-250ENST00000636367 SMYD5Q6GMV2 418 aa12.74□□□□□ -0.37
SMARCA2-250ENST00000636367 KRI1Q8N9T8 703 aaKnown RBP12.74□□□□□ -0.37
SMARCA2-250ENST00000636367 PDE4DQ08499 809 aa12.71□□□□□ -0.37
SMARCA2-250ENST00000636367 TRIM66O15016 1216 aa12.7□□□□□ -0.38
SMARCA2-250ENST00000636367 GPIHBP1Q8IV16 184 aa12.7□□□□□ -0.38
SMARCA2-250ENST00000636367 FAM117AQ9C073 453 aa12.69□□□□□ -0.38
SMARCA2-250ENST00000636367 NCKAP5LQ9HCH0 1330 aa12.68□□□□□ -0.38
SMARCA2-250ENST00000636367 MLLT3P42568 568 aaPredicted RBP12.65□□□□□ -0.38
SMARCA2-250ENST00000636367 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
SMARCA2-250ENST00000636367 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
SMARCA2-250ENST00000636367 ZNF316A6NFI3 1004 aaPredicted RBP12.65□□□□□ -0.38
SMARCA2-250ENST00000636367 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
SMARCA2-250ENST00000636367 CCDC82Q8N4S0 544 aa12.65□□□□□ -0.38
SMARCA2-250ENST00000636367 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
SMARCA2-250ENST00000636367 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
SMARCA2-250ENST00000636367 POTEDQ86YR6 584 aa12.61□□□□□ -0.39
SMARCA2-250ENST00000636367 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
SMARCA2-250ENST00000636367 ABCC9O60706 1549 aa12.61□□□□□ -0.39
SMARCA2-250ENST00000636367 PLEKHG3A1L390 1219 aa12.59□□□□□ -0.39
SMARCA2-250ENST00000636367 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
SMARCA2-250ENST00000636367 FBXO22Q8NEZ5 403 aa12.59□□□□□ -0.39
SMARCA2-250ENST00000636367 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
SMARCA2-250ENST00000636367 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
SMARCA2-250ENST00000636367 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
SMARCA2-250ENST00000636367 PSEN1P49768 467 aa12.55□□□□□ -0.4
SMARCA2-250ENST00000636367 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
SMARCA2-250ENST00000636367 FLIIQ13045 1269 aa12.53□□□□□ -0.4
SMARCA2-250ENST00000636367 MFSD10Q14728 455 aa12.53□□□□□ -0.4
SMARCA2-250ENST00000636367 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
SMARCA2-250ENST00000636367 ARIH1Q9Y4X5 557 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms