RNA–Protein interactions for RNA: ENST00000636342.1

NRXN1-247, Transcript of neurexin 1, humanhuman

TSL 5

Gene NRXN1, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-247ENST00000636342 EMP3P54852 163 aa3.64□□□□□ -1.83
NRXN1-247ENST00000636342 PRR29P0C7W0 189 aa3.62□□□□□ -1.83
NRXN1-247ENST00000636342 SPDYE2BA6NHP3 402 aa3.61□□□□□ -1.83
NRXN1-247ENST00000636342 SPDYE6P0CI01 402 aa3.61□□□□□ -1.83
NRXN1-247ENST00000636342 SPDYE2Q495Y8 402 aa3.61□□□□□ -1.83
NRXN1-247ENST00000636342 HS3ST6Q96QI5 342 aa3.61□□□□□ -1.83
NRXN1-247ENST00000636342 PAK3O75914 559 aaPredicted RBP3.58□□□□□ -1.84
NRXN1-247ENST00000636342 NCBP3Q53F19 620 aaKnown RBP3.58□□□□□ -1.84
NRXN1-247ENST00000636342 Q6ZNB5 142 aa3.57□□□□□ -1.84
NRXN1-247ENST00000636342 FAM205CA6NFA0 338 aa3.55□□□□□ -1.84
NRXN1-247ENST00000636342 SEC24BO95487 1268 aa3.53□□□□□ -1.84
NRXN1-247ENST00000636342 SUZ12Q15022 739 aaKnown RBP3.52□□□□□ -1.85
NRXN1-247ENST00000636342 POTEFA5A3E0 1075 aa3.51□□□□□ -1.85
NRXN1-247ENST00000636342 POTEB3A0JP26 581 aa3.48□□□□□ -1.85
NRXN1-247ENST00000636342 POTEBQ6S5H4 581 aa3.48□□□□□ -1.85
NRXN1-247ENST00000636342 ATN1P54259 1190 aaPredicted RBP3.47□□□□□ -1.85
NRXN1-247ENST00000636342 PHF12Q96QT6 1004 aa3.47□□□□□ -1.85
NRXN1-247ENST00000636342 HCSTQ9UBK5 93 aa3.47□□□□□ -1.85
NRXN1-247ENST00000636342 ANO8Q9HCE9 1232 aaPredicted RBP3.45□□□□□ -1.86
NRXN1-247ENST00000636342 STK17AQ9UEE5 414 aa3.45□□□□□ -1.86
NRXN1-247ENST00000636342 SLC4A2P04920 1241 aa3.43□□□□□ -1.86
NRXN1-247ENST00000636342 LAPTM4AQ15012 233 aa3.43□□□□□ -1.86
NRXN1-247ENST00000636342 MS4A3Q96HJ5 214 aa3.43□□□□□ -1.86
NRXN1-247ENST00000636342 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
NRXN1-247ENST00000636342 TRAF7Q6Q0C0 670 aa3.41□□□□□ -1.86
NRXN1-247ENST00000636342 KRTAP1-3Q8IUG1 177 aa3.41□□□□□ -1.86
NRXN1-247ENST00000636342 ZNF775Q96BV0 537 aaPredicted RBP3.41□□□□□ -1.86
NRXN1-247ENST00000636342 IER5LQ5T953 404 aa3.4□□□□□ -1.87
NRXN1-247ENST00000636342 COLQQ9Y215 455 aaPredicted RBP3.4□□□□□ -1.87
NRXN1-247ENST00000636342 BTBD11A6QL63 1104 aa3.38□□□□□ -1.87
NRXN1-247ENST00000636342 ZNF787Q6DD87 383 aa3.38□□□□□ -1.87
NRXN1-247ENST00000636342 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
NRXN1-247ENST00000636342 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.37□□□□□ -1.87
NRXN1-247ENST00000636342 KRTAP9-2Q9BYQ4 174 aa3.36□□□□□ -1.87
NRXN1-247ENST00000636342 KRTAP9-6A0A140TA67 174 aa3.34□□□□□ -1.87
NRXN1-247ENST00000636342 SSUH2Q9Y2M2 353 aa3.34□□□□□ -1.87
NRXN1-247ENST00000636342 TIE1P35590 1138 aa3.33□□□□□ -1.88
NRXN1-247ENST00000636342 IFFO2Q5TF58 517 aa3.33□□□□□ -1.88
NRXN1-247ENST00000636342 ZNF692Q9BU19 519 aaPredicted RBP3.33□□□□□ -1.88
NRXN1-247ENST00000636342 ERBB3P21860 1342 aa3.32□□□□□ -1.88
NRXN1-247ENST00000636342 NPM3O75607 178 aaKnown RBP3.31□□□□□ -1.88
NRXN1-247ENST00000636342 XP32Q5T750 250 aa3.31□□□□□ -1.88
NRXN1-247ENST00000636342 PSMG3-AS1Q96PY0 264 aa3.31□□□□□ -1.88
NRXN1-247ENST00000636342 BMP2KQ9NSY1 1161 aaPredicted RBP3.31□□□□□ -1.88
NRXN1-247ENST00000636342 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
NRXN1-247ENST00000636342 INSM1Q01101 510 aaPredicted RBP3.28□□□□□ -1.88
NRXN1-247ENST00000636342 PLCG2P16885 1265 aa3.27□□□□□ -1.89
NRXN1-247ENST00000636342 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
NRXN1-247ENST00000636342 A0A0G2JS52 829 aa3.26□□□□□ -1.89
NRXN1-247ENST00000636342 FBLN2P98095 1184 aa3.26□□□□□ -1.89
NRXN1-247ENST00000636342 ZNF687Q8N1G0 1237 aa3.26□□□□□ -1.89
NRXN1-247ENST00000636342 NPM1P06748 294 aaKnown RBP eCLIP3.25□□□□□ -1.89
NRXN1-247ENST00000636342 TREML4Q6UXN2 200 aa3.24□□□□□ -1.89
NRXN1-247ENST00000636342 ANKRD13DQ6ZTN6 518 aa3.24□□□□□ -1.89
NRXN1-247ENST00000636342 FAM181BA6NEQ2 426 aa3.23□□□□□ -1.89
NRXN1-247ENST00000636342 LCE2BO14633 110 aa3.23□□□□□ -1.89
NRXN1-247ENST00000636342 MYCNP04198 464 aaPredicted RBP3.22□□□□□ -1.89
NRXN1-247ENST00000636342 HOXB1P14653 301 aaPredicted RBP3.22□□□□□ -1.89
NRXN1-247ENST00000636342 KRTAP17-1Q9BYP8 105 aa3.22□□□□□ -1.89
NRXN1-247ENST00000636342 KRTAP4-7Q9BYR0 210 aa3.21□□□□□ -1.9
NRXN1-247ENST00000636342 VARS2Q5ST30 1063 aaKnown RBP3.2□□□□□ -1.9
NRXN1-247ENST00000636342 TTLL13PA6NNM8 815 aa3.19□□□□□ -1.9
NRXN1-247ENST00000636342 PABPN1Q86U42 306 aaKnown RBP eCLIP3.19□□□□□ -1.9
NRXN1-247ENST00000636342 ZNF710Q8N1W2 664 aa3.18□□□□□ -1.9
NRXN1-247ENST00000636342 TRIM35Q9UPQ4 493 aa3.18□□□□□ -1.9
NRXN1-247ENST00000636342 GFRA3O60609 400 aa3.17□□□□□ -1.9
NRXN1-247ENST00000636342 C3orf67Q6ZVT6 689 aa3.17□□□□□ -1.9
NRXN1-247ENST00000636342 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
NRXN1-247ENST00000636342 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
NRXN1-247ENST00000636342 LSM11P83369 360 aaKnown RBP eCLIP3.15□□□□□ -1.91
NRXN1-247ENST00000636342 LCE2AQ5TA79 106 aaPredicted RBP3.15□□□□□ -1.91
NRXN1-247ENST00000636342 CREBZFQ9NS37 354 aa3.15□□□□□ -1.91
NRXN1-247ENST00000636342 WIPF1O43516 503 aa3.13□□□□□ -1.91
NRXN1-247ENST00000636342 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
NRXN1-247ENST00000636342 NRG2O14511 850 aaPredicted RBP3.12□□□□□ -1.91
NRXN1-247ENST00000636342 RIMBP2O15034 1052 aa3.12□□□□□ -1.91
NRXN1-247ENST00000636342 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
NRXN1-247ENST00000636342 OCEL1Q9H607 264 aa3.12□□□□□ -1.91
NRXN1-247ENST00000636342 KIF12Q96FN5 646 aa3.11□□□□□ -1.91
NRXN1-247ENST00000636342 DOK7Q18PE1 504 aa3.1□□□□□ -1.91
NRXN1-247ENST00000636342 IRX5P78411 483 aaPredicted RBP3.09□□□□□ -1.91
NRXN1-247ENST00000636342 TRPC6Q9Y210 931 aa3.09□□□□□ -1.91
NRXN1-247ENST00000636342 WFS1O76024 890 aa3.06□□□□□ -1.92
NRXN1-247ENST00000636342 L3MBTL3Q96JM7 780 aaPredicted RBP3.06□□□□□ -1.92
NRXN1-247ENST00000636342 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
NRXN1-247ENST00000636342 HOXB3P14651 431 aaPredicted RBP3.05□□□□□ -1.92
NRXN1-247ENST00000636342 PBX2P40425 430 aa3.05□□□□□ -1.92
NRXN1-247ENST00000636342 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
NRXN1-247ENST00000636342 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
NRXN1-247ENST00000636342 STAG3Q9UJ98 1225 aa3.04□□□□□ -1.92
NRXN1-247ENST00000636342 CCDC61Q9Y6R9 512 aa3.03□□□□□ -1.92
NRXN1-247ENST00000636342 ZSWIM6Q9HCJ5 1215 aa3.02□□□□□ -1.93
NRXN1-247ENST00000636342 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
NRXN1-247ENST00000636342 MAP3K13O43283 966 aa2.99□□□□□ -1.93
NRXN1-247ENST00000636342 SGIP1Q9BQI5 828 aa2.99□□□□□ -1.93
NRXN1-247ENST00000636342 TSPYL2Q9H2G4 693 aaPredicted RBP2.99□□□□□ -1.93
NRXN1-247ENST00000636342 KCTD12Q96CX2 325 aaKnown RBP2.98□□□□□ -1.93
NRXN1-247ENST00000636342 KCTD17Q8N5Z5 321 aa2.97□□□□□ -1.93
NRXN1-247ENST00000636342 STAC3Q96MF2 364 aa2.96□□□□□ -1.94
NRXN1-247ENST00000636342 ADGRD1Q6QNK2 874 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms