RNA–Protein interactions for RNA: ENST00000636146.1

SYNGAP1-212, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-212ENST00000636146 KIF27Q86VH2 1401 aa13.52□□□□□ -0.25
SYNGAP1-212ENST00000636146 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
SYNGAP1-212ENST00000636146 TTBK1Q5TCY1 1321 aaPredicted RBP13.46□□□□□ -0.25
SYNGAP1-212ENST00000636146 CUL7Q14999 1698 aa13.45□□□□□ -0.26
SYNGAP1-212ENST00000636146 FAM69CQ0P6D2 419 aa13.45□□□□□ -0.26
SYNGAP1-212ENST00000636146 IGF1RP08069 1367 aa13.45□□□□□ -0.26
SYNGAP1-212ENST00000636146 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
SYNGAP1-212ENST00000636146 CARMIL1Q5VZK9 1371 aa13.41□□□□□ -0.26
SYNGAP1-212ENST00000636146 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
SYNGAP1-212ENST00000636146 KIF13AQ9H1H9 1805 aa13.39□□□□□ -0.27
SYNGAP1-212ENST00000636146 PTPRGP23470 1445 aa13.38□□□□□ -0.27
SYNGAP1-212ENST00000636146 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
SYNGAP1-212ENST00000636146 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
SYNGAP1-212ENST00000636146 MAPKBP1O60336 1514 aa13.35□□□□□ -0.27
SYNGAP1-212ENST00000636146 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.27
SYNGAP1-212ENST00000636146 IQGAP2Q13576 1575 aa13.32□□□□□ -0.28
SYNGAP1-212ENST00000636146 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
SYNGAP1-212ENST00000636146 TSPOAP1O95153 1857 aa13.29□□□□□ -0.28
SYNGAP1-212ENST00000636146 RAPGEF2Q9Y4G8 1499 aa13.28□□□□□ -0.28
SYNGAP1-212ENST00000636146 KDM6BO15054 1643 aa13.28□□□□□ -0.28
SYNGAP1-212ENST00000636146 FAM9AQ8IZU1 332 aaPredicted RBP13.27□□□□□ -0.29
SYNGAP1-212ENST00000636146 ABCC2Q92887 1545 aa13.26□□□□□ -0.29
SYNGAP1-212ENST00000636146 PLB1Q6P1J6 1458 aa13.24□□□□□ -0.29
SYNGAP1-212ENST00000636146 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
SYNGAP1-212ENST00000636146 ASXL2Q76L83 1435 aa13.23□□□□□ -0.29
SYNGAP1-212ENST00000636146 CHIC1Q5VXU3 224 aa13.23□□□□□ -0.29
SYNGAP1-212ENST00000636146 UHRF1BP1LA0JNW5 1464 aa13.21□□□□□ -0.3
SYNGAP1-212ENST00000636146 DISP1Q96F81 1524 aa13.19□□□□□ -0.3
SYNGAP1-212ENST00000636146 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
SYNGAP1-212ENST00000636146 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
SYNGAP1-212ENST00000636146 KIAA0556O60303 1618 aa13.17□□□□□ -0.3
SYNGAP1-212ENST00000636146 GLI2P10070 1586 aa13.15□□□□□ -0.3
SYNGAP1-212ENST00000636146 CTTNBP2Q8WZ74 1663 aa13.15□□□□□ -0.3
SYNGAP1-212ENST00000636146 TEX14Q8IWB6 1497 aa13.15□□□□□ -0.3
SYNGAP1-212ENST00000636146 KDM5BQ9UGL1 1544 aa13.14□□□□□ -0.31
SYNGAP1-212ENST00000636146 ZCCHC11Q5TAX3 1644 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-212ENST00000636146 KCNH8Q96L42 1107 aa13.13□□□□□ -0.31
SYNGAP1-212ENST00000636146 EPRSP07814 1512 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-212ENST00000636146 KDM4FA0A1W2PPD8 638 aa13.11□□□□□ -0.31
SYNGAP1-212ENST00000636146 WDR7Q9Y4E6 1490 aa13.1□□□□□ -0.31
SYNGAP1-212ENST00000636146 P3H3Q8IVL6 736 aa13.09□□□□□ -0.31
SYNGAP1-212ENST00000636146 MAP3K4Q9Y6R4 1608 aa13.09□□□□□ -0.31
SYNGAP1-212ENST00000636146 ARID3CA6NKF2 412 aa13.08□□□□□ -0.32
SYNGAP1-212ENST00000636146 PPRC1Q5VV67 1664 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-212ENST00000636146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-212ENST00000636146 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-212ENST00000636146 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
SYNGAP1-212ENST00000636146 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
SYNGAP1-212ENST00000636146 RANGAP1P46060 587 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-212ENST00000636146 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
SYNGAP1-212ENST00000636146 EEA1Q15075 1411 aa13.03□□□□□ -0.32
SYNGAP1-212ENST00000636146 ADGRL1O94910 1474 aa13.03□□□□□ -0.32
SYNGAP1-212ENST00000636146 ABCA8O94911 1581 aa13.03□□□□□ -0.32
SYNGAP1-212ENST00000636146 CFAP43Q8NDM7 1665 aa13.01□□□□□ -0.33
SYNGAP1-212ENST00000636146 COL17A1Q9UMD9 1497 aaPredicted RBP13□□□□□ -0.33
SYNGAP1-212ENST00000636146 MAGI3Q5TCQ9 1506 aa12.98□□□□□ -0.33
SYNGAP1-212ENST00000636146 ATP10BO94823 1461 aa12.95□□□□□ -0.34
SYNGAP1-212ENST00000636146 RAPGEF6Q8TEU7 1601 aa12.93□□□□□ -0.34
SYNGAP1-212ENST00000636146 PLEKHD1A6NEE1 506 aa12.92□□□□□ -0.34
SYNGAP1-212ENST00000636146 PHLDB1Q86UU1 1377 aa12.92□□□□□ -0.34
SYNGAP1-212ENST00000636146 SAMD9Q5K651 1589 aa12.91□□□□□ -0.34
SYNGAP1-212ENST00000636146 EHMT2Q96KQ7 1210 aa12.9□□□□□ -0.34
SYNGAP1-212ENST00000636146 ATP1B4Q9UN42 357 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-212ENST00000636146 ARID4BQ4LE39 1312 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-212ENST00000636146 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-212ENST00000636146 FHOD3Q2V2M9 1422 aa12.88□□□□□ -0.35
SYNGAP1-212ENST00000636146 ARAP3Q8WWN8 1544 aa12.88□□□□□ -0.35
SYNGAP1-212ENST00000636146 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
SYNGAP1-212ENST00000636146 RAPGEF3O95398 923 aa12.87□□□□□ -0.35
SYNGAP1-212ENST00000636146 KIF21BO75037 1637 aa12.87□□□□□ -0.35
SYNGAP1-212ENST00000636146 NEO1Q92859 1461 aa12.85□□□□□ -0.35
SYNGAP1-212ENST00000636146 HECW2Q9P2P5 1572 aa12.85□□□□□ -0.35
SYNGAP1-212ENST00000636146 NUP153P49790 1475 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-212ENST00000636146 EFCAB5A4FU69 1503 aa12.84□□□□□ -0.35
SYNGAP1-212ENST00000636146 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
SYNGAP1-212ENST00000636146 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-212ENST00000636146 CFAP74Q9C0B2 1584 aa12.8□□□□□ -0.36
SYNGAP1-212ENST00000636146 DENND4BO75064 1496 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-212ENST00000636146 FANCAO15360 1455 aa12.78□□□□□ -0.36
SYNGAP1-212ENST00000636146 PLPPR3Q6T4P5 718 aa12.78□□□□□ -0.36
SYNGAP1-212ENST00000636146 AKNAQ7Z591 1439 aa12.78□□□□□ -0.36
SYNGAP1-212ENST00000636146 FMN1Q68DA7 1419 aa12.77□□□□□ -0.37
SYNGAP1-212ENST00000636146 MYT1LQ9UL68 1186 aa12.76□□□□□ -0.37
SYNGAP1-212ENST00000636146 POGZQ7Z3K3 1410 aa12.76□□□□□ -0.37
SYNGAP1-212ENST00000636146 PTPRMP28827 1452 aa12.75□□□□□ -0.37
SYNGAP1-212ENST00000636146 CDK13Q14004 1512 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-212ENST00000636146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.74□□□□□ -0.37
SYNGAP1-212ENST00000636146 EFCAB2Q5VUJ9 269 aa12.73□□□□□ -0.37
SYNGAP1-212ENST00000636146 ADAMTSL3P82987 1691 aa12.73□□□□□ -0.37
SYNGAP1-212ENST00000636146 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
SYNGAP1-212ENST00000636146 BCORL1Q5H9F3 1711 aa12.72□□□□□ -0.37
SYNGAP1-212ENST00000636146 MLECQ14165 292 aa12.72□□□□□ -0.37
SYNGAP1-212ENST00000636146 FRMPD1Q5SYB0 1578 aa12.72□□□□□ -0.37
SYNGAP1-212ENST00000636146 TTC37Q6PGP7 1564 aa12.72□□□□□ -0.37
SYNGAP1-212ENST00000636146 ZFYVE16Q7Z3T8 1539 aa12.71□□□□□ -0.38
SYNGAP1-212ENST00000636146 ARHGEF40Q8TER5 1519 aa12.71□□□□□ -0.38
SYNGAP1-212ENST00000636146 CLIP1P30622 1438 aa12.71□□□□□ -0.38
SYNGAP1-212ENST00000636146 SCAPERQ9BY12 1400 aa12.71□□□□□ -0.38
SYNGAP1-212ENST00000636146 MADDQ8WXG6 1647 aa12.7□□□□□ -0.38
SYNGAP1-212ENST00000636146 RICTORQ6R327 1708 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms