RNA–Protein interactions for RNA: ENST00000636116.1

SYNGAP1-211, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-211ENST00000636116 KIF13AQ9H1H9 1805 aa13.27□□□□□ -0.29
SYNGAP1-211ENST00000636116 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
SYNGAP1-211ENST00000636116 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
SYNGAP1-211ENST00000636116 ABCC10Q5T3U5 1492 aa13.21□□□□□ -0.3
SYNGAP1-211ENST00000636116 IGF1RP08069 1367 aa13.2□□□□□ -0.3
SYNGAP1-211ENST00000636116 TTBK1Q5TCY1 1321 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-211ENST00000636116 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
SYNGAP1-211ENST00000636116 KIAA0586Q9BVV6 1533 aa13.17□□□□□ -0.3
SYNGAP1-211ENST00000636116 MAPKBP1O60336 1514 aa13.15□□□□□ -0.3
SYNGAP1-211ENST00000636116 DIP2BQ9P265 1576 aa13.15□□□□□ -0.3
SYNGAP1-211ENST00000636116 KDM4FA0A1W2PPD8 638 aa13.13□□□□□ -0.31
SYNGAP1-211ENST00000636116 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
SYNGAP1-211ENST00000636116 PTPRGP23470 1445 aa13.12□□□□□ -0.31
SYNGAP1-211ENST00000636116 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
SYNGAP1-211ENST00000636116 KDM6BO15054 1643 aa13.09□□□□□ -0.31
SYNGAP1-211ENST00000636116 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
SYNGAP1-211ENST00000636116 CUL7Q14999 1698 aa13.07□□□□□ -0.32
SYNGAP1-211ENST00000636116 TNIKQ9UKE5 1360 aa13.06□□□□□ -0.32
SYNGAP1-211ENST00000636116 CARMIL2Q6F5E8 1435 aa13.04□□□□□ -0.32
SYNGAP1-211ENST00000636116 ASXL2Q76L83 1435 aa13.03□□□□□ -0.32
SYNGAP1-211ENST00000636116 ABCC2Q92887 1545 aa13.03□□□□□ -0.32
SYNGAP1-211ENST00000636116 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
SYNGAP1-211ENST00000636116 IQGAP2Q13576 1575 aa12.98□□□□□ -0.33
SYNGAP1-211ENST00000636116 UACAQ9BZF9 1416 aa12.98□□□□□ -0.33
SYNGAP1-211ENST00000636116 DISP1Q96F81 1524 aa12.98□□□□□ -0.33
SYNGAP1-211ENST00000636116 UHRF1BP1LA0JNW5 1464 aa12.97□□□□□ -0.33
SYNGAP1-211ENST00000636116 COL17A1Q9UMD9 1497 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-211ENST00000636116 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.34
SYNGAP1-211ENST00000636116 GLI2P10070 1586 aa12.95□□□□□ -0.34
SYNGAP1-211ENST00000636116 EPRSP07814 1512 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-211ENST00000636116 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-211ENST00000636116 ADGRL1O94910 1474 aa12.92□□□□□ -0.34
SYNGAP1-211ENST00000636116 KDM5BQ9UGL1 1544 aa12.92□□□□□ -0.34
SYNGAP1-211ENST00000636116 RAPGEF2Q9Y4G8 1499 aa12.91□□□□□ -0.34
SYNGAP1-211ENST00000636116 UGGT2Q9NYU1 1516 aa12.9□□□□□ -0.34
SYNGAP1-211ENST00000636116 ZCCHC11Q5TAX3 1644 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-211ENST00000636116 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
SYNGAP1-211ENST00000636116 MAP3K4Q9Y6R4 1608 aa12.88□□□□□ -0.35
SYNGAP1-211ENST00000636116 KIAA0556O60303 1618 aa12.87□□□□□ -0.35
SYNGAP1-211ENST00000636116 TEX14Q8IWB6 1497 aa12.86□□□□□ -0.35
SYNGAP1-211ENST00000636116 WDR7Q9Y4E6 1490 aa12.84□□□□□ -0.35
SYNGAP1-211ENST00000636116 CD109Q6YHK3 1445 aa12.82□□□□□ -0.36
SYNGAP1-211ENST00000636116 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
SYNGAP1-211ENST00000636116 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
SYNGAP1-211ENST00000636116 HECW2Q9P2P5 1572 aa12.79□□□□□ -0.36
SYNGAP1-211ENST00000636116 ABCA8O94911 1581 aa12.78□□□□□ -0.36
SYNGAP1-211ENST00000636116 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
SYNGAP1-211ENST00000636116 MAGI3Q5TCQ9 1506 aa12.77□□□□□ -0.37
SYNGAP1-211ENST00000636116 CTTNBP2Q8WZ74 1663 aa12.77□□□□□ -0.37
SYNGAP1-211ENST00000636116 CFAP43Q8NDM7 1665 aa12.74□□□□□ -0.37
SYNGAP1-211ENST00000636116 PRXQ9BXM0 1461 aa12.73□□□□□ -0.37
SYNGAP1-211ENST00000636116 ATP10BO94823 1461 aa12.72□□□□□ -0.37
SYNGAP1-211ENST00000636116 FAM9AQ8IZU1 332 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-211ENST00000636116 RAPGEF3O95398 923 aa12.7□□□□□ -0.38
SYNGAP1-211ENST00000636116 KIF21BO75037 1637 aa12.7□□□□□ -0.38
SYNGAP1-211ENST00000636116 ARAP3Q8WWN8 1544 aa12.68□□□□□ -0.38
SYNGAP1-211ENST00000636116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-211ENST00000636116 RANGAP1P46060 587 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-211ENST00000636116 HNRNPUL2Q1KMD3 747 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-211ENST00000636116 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
SYNGAP1-211ENST00000636116 ARID4BQ4LE39 1312 aaPredicted RBP12.63□□□□□ -0.39
SYNGAP1-211ENST00000636116 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
SYNGAP1-211ENST00000636116 PTPRMP28827 1452 aa12.62□□□□□ -0.39
SYNGAP1-211ENST00000636116 PHLDB1Q86UU1 1377 aa12.62□□□□□ -0.39
SYNGAP1-211ENST00000636116 FBXO41Q8TF61 875 aa12.6□□□□□ -0.39
SYNGAP1-211ENST00000636116 RAPGEF6Q8TEU7 1601 aa12.59□□□□□ -0.39
SYNGAP1-211ENST00000636116 ADAMTSL3P82987 1691 aa12.59□□□□□ -0.39
SYNGAP1-211ENST00000636116 SAMD9Q5K651 1589 aa12.59□□□□□ -0.39
SYNGAP1-211ENST00000636116 NEO1Q92859 1461 aa12.59□□□□□ -0.39
SYNGAP1-211ENST00000636116 PLEKHD1A6NEE1 506 aa12.58□□□□□ -0.4
SYNGAP1-211ENST00000636116 NUP153P49790 1475 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-211ENST00000636116 FHOD3Q2V2M9 1422 aa12.57□□□□□ -0.4
SYNGAP1-211ENST00000636116 PLPPR3Q6T4P5 718 aa12.57□□□□□ -0.4
SYNGAP1-211ENST00000636116 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
SYNGAP1-211ENST00000636116 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
SYNGAP1-211ENST00000636116 MADDQ8WXG6 1647 aa12.54□□□□□ -0.4
SYNGAP1-211ENST00000636116 HSPA2P54652 639 aa12.53□□□□□ -0.4
SYNGAP1-211ENST00000636116 AKNAQ7Z591 1439 aa12.53□□□□□ -0.4
SYNGAP1-211ENST00000636116 DENND4BO75064 1496 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-211ENST00000636116 MLECQ14165 292 aa12.51□□□□□ -0.41
SYNGAP1-211ENST00000636116 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
SYNGAP1-211ENST00000636116 FANCAO15360 1455 aa12.51□□□□□ -0.41
SYNGAP1-211ENST00000636116 LMTK3Q96Q04 1460 aa12.51□□□□□ -0.41
SYNGAP1-211ENST00000636116 PCF11O94913 1555 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-211ENST00000636116 RIMS1Q86UR5 1692 aaKnown RBP12.49□□□□□ -0.41
SYNGAP1-211ENST00000636116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.49□□□□□ -0.41
SYNGAP1-211ENST00000636116 YEATS2Q9ULM3 1422 aa12.49□□□□□ -0.41
SYNGAP1-211ENST00000636116 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
SYNGAP1-211ENST00000636116 ARHGEF40Q8TER5 1519 aa12.48□□□□□ -0.41
SYNGAP1-211ENST00000636116 ATP1B4Q9UN42 357 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-211ENST00000636116 TTC37Q6PGP7 1564 aa12.47□□□□□ -0.41
SYNGAP1-211ENST00000636116 EEA1Q15075 1411 aa12.46□□□□□ -0.41
SYNGAP1-211ENST00000636116 CDK13Q14004 1512 aaKnown RBP12.46□□□□□ -0.42
SYNGAP1-211ENST00000636116 SIGLEC1Q9BZZ2 1709 aa12.45□□□□□ -0.42
SYNGAP1-211ENST00000636116 POGZQ7Z3K3 1410 aa12.45□□□□□ -0.42
SYNGAP1-211ENST00000636116 SCAPERQ9BY12 1400 aa12.45□□□□□ -0.42
SYNGAP1-211ENST00000636116 ZFYVE16Q7Z3T8 1539 aa12.44□□□□□ -0.42
SYNGAP1-211ENST00000636116 CEBPAP49715 358 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-211ENST00000636116 HECW1Q76N89 1606 aa12.43□□□□□ -0.42
SYNGAP1-211ENST00000636116 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms