RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ERICH3Q5RHP9 1530 aa33.23■■■□□ 2.91
CLN6-212ENST00000636020 NPM1P06748 294 aaKnown RBP eCLIP33.23■■■□□ 2.91
CLN6-212ENST00000636020 MAPKBP1O60336 1514 aa33.21■■■□□ 2.91
CLN6-212ENST00000636020 DIP2BQ9P265 1576 aa33.18■■■□□ 2.9
CLN6-212ENST00000636020 KDM6BO15054 1643 aa33.13■■■□□ 2.89
CLN6-212ENST00000636020 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
CLN6-212ENST00000636020 BIVM-ERCC5R4GMW8 1640 aa33.12■■■□□ 2.89
CLN6-212ENST00000636020 ADCY10Q96PN6 1610 aa33.07■■■□□ 2.88
CLN6-212ENST00000636020 RUSC2Q8N2Y8 1516 aa33.03■■■□□ 2.88
CLN6-212ENST00000636020 TSPOAP1O95153 1857 aa32.97■■■□□ 2.87
CLN6-212ENST00000636020 KIAA0586Q9BVV6 1533 aa32.82■■■□□ 2.85
CLN6-212ENST00000636020 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
CLN6-212ENST00000636020 ADGRL1O94910 1474 aa32.76■■■□□ 2.84
CLN6-212ENST00000636020 PTPRGP23470 1445 aa32.72■■■□□ 2.83
CLN6-212ENST00000636020 PPRC1Q5VV67 1664 aaKnown RBP32.67■■■□□ 2.82
CLN6-212ENST00000636020 IGF1RP08069 1367 aa32.66■■■□□ 2.82
CLN6-212ENST00000636020 ABCC2Q92887 1545 aa32.65■■■□□ 2.82
CLN6-212ENST00000636020 GLI2P10070 1586 aa32.65■■■□□ 2.82
CLN6-212ENST00000636020 ASXL2Q76L83 1435 aa32.64■■■□□ 2.82
CLN6-212ENST00000636020 PLB1Q6P1J6 1458 aa32.63■■■□□ 2.81
CLN6-212ENST00000636020 TTBK1Q5TCY1 1321 aaPredicted RBP32.6■■■□□ 2.81
CLN6-212ENST00000636020 HECW2Q9P2P5 1572 aa32.6■■■□□ 2.81
CLN6-212ENST00000636020 COL17A1Q9UMD9 1497 aaPredicted RBP32.6■■■□□ 2.81
CLN6-212ENST00000636020 TNIKQ9UKE5 1360 aa32.58■■■□□ 2.81
CLN6-212ENST00000636020 CUL7Q14999 1698 aa32.53■■■□□ 2.8
CLN6-212ENST00000636020 CARMIL2Q6F5E8 1435 aa32.51■■■□□ 2.8
CLN6-212ENST00000636020 UHRF1BP1LA0JNW5 1464 aa32.49■■■□□ 2.79
CLN6-212ENST00000636020 KIF27Q86VH2 1401 aa32.48■■■□□ 2.79
CLN6-212ENST00000636020 EPRSP07814 1512 aaKnown RBP32.44■■■□□ 2.78
CLN6-212ENST00000636020 UACAQ9BZF9 1416 aa32.43■■■□□ 2.78
CLN6-212ENST00000636020 MAP3K4Q9Y6R4 1608 aa32.41■■■□□ 2.78
CLN6-212ENST00000636020 TEX14Q8IWB6 1497 aa32.4■■■□□ 2.78
CLN6-212ENST00000636020 CARMIL1Q5VZK9 1371 aa32.38■■■□□ 2.77
CLN6-212ENST00000636020 KDM5BQ9UGL1 1544 aa32.36■■■□□ 2.77
CLN6-212ENST00000636020 IQGAP2Q13576 1575 aa32.32■■■□□ 2.76
CLN6-212ENST00000636020 DISP1Q96F81 1524 aa32.3■■■□□ 2.76
CLN6-212ENST00000636020 FBXO41Q8TF61 875 aa32.27■■■□□ 2.76
CLN6-212ENST00000636020 ZCCHC11Q5TAX3 1644 aaKnown RBP32.23■■■□□ 2.75
CLN6-212ENST00000636020 WDR7Q9Y4E6 1490 aa32.15■■■□□ 2.74
CLN6-212ENST00000636020 UGGT2Q9NYU1 1516 aa32.12■■■□□ 2.73
CLN6-212ENST00000636020 MAGI3Q5TCQ9 1506 aa32.1■■■□□ 2.73
CLN6-212ENST00000636020 CD109Q6YHK3 1445 aa32.09■■■□□ 2.73
CLN6-212ENST00000636020 KIAA0556O60303 1618 aa32.04■■■□□ 2.72
CLN6-212ENST00000636020 CFAP43Q8NDM7 1665 aa32■■■□□ 2.71
CLN6-212ENST00000636020 KCNH8Q96L42 1107 aa32■■■□□ 2.71
CLN6-212ENST00000636020 KIF21BO75037 1637 aa31.99■■■□□ 2.71
CLN6-212ENST00000636020 RAPGEF2Q9Y4G8 1499 aa31.96■■■□□ 2.71
CLN6-212ENST00000636020 PTPRMP28827 1452 aa31.88■■■□□ 2.69
CLN6-212ENST00000636020 ARAP3Q8WWN8 1544 aa31.88■■■□□ 2.69
CLN6-212ENST00000636020 ABCA8O94911 1581 aa31.85■■■□□ 2.69
CLN6-212ENST00000636020 ADAMTSL3P82987 1691 aa31.83■■■□□ 2.69
CLN6-212ENST00000636020 GOLGA3Q08378 1498 aa31.76■■■□□ 2.67
CLN6-212ENST00000636020 PHLDB1Q86UU1 1377 aa31.72■■■□□ 2.67
CLN6-212ENST00000636020 PCF11O94913 1555 aaKnown RBP31.72■■■□□ 2.67
CLN6-212ENST00000636020 LMTK3Q96Q04 1460 aa31.69■■■□□ 2.66
CLN6-212ENST00000636020 RAPGEF3O95398 923 aa31.68■■■□□ 2.66
CLN6-212ENST00000636020 CTTNBP2Q8WZ74 1663 aa31.67■■■□□ 2.66
CLN6-212ENST00000636020 BCORL1Q5H9F3 1711 aa31.64■■■□□ 2.66
CLN6-212ENST00000636020 MADDQ8WXG6 1647 aa31.61■■■□□ 2.65
CLN6-212ENST00000636020 ATP10BO94823 1461 aa31.61■■■□□ 2.65
CLN6-212ENST00000636020 ARID4BQ4LE39 1312 aaPredicted RBP31.6■■■□□ 2.65
CLN6-212ENST00000636020 ARID3CA6NKF2 412 aa31.6■■■□□ 2.65
CLN6-212ENST00000636020 ABCA9Q8IUA7 1624 aa31.6■■■□□ 2.65
CLN6-212ENST00000636020 NEO1Q92859 1461 aa31.56■■■□□ 2.64
CLN6-212ENST00000636020 FRMPD1Q5SYB0 1578 aa31.52■■■□□ 2.64
CLN6-212ENST00000636020 HSPA2P54652 639 aa31.52■■■□□ 2.64
CLN6-212ENST00000636020 CERKQ8TCT0 537 aa31.5■■■□□ 2.63
CLN6-212ENST00000636020 FAM9AQ8IZU1 332 aaPredicted RBP31.49■■■□□ 2.63
CLN6-212ENST00000636020 RIMS1Q86UR5 1692 aaKnown RBP31.45■■■□□ 2.63
CLN6-212ENST00000636020 P3H3Q8IVL6 736 aa31.44■■■□□ 2.62
CLN6-212ENST00000636020 PRXQ9BXM0 1461 aa31.4■■■□□ 2.62
CLN6-212ENST00000636020 ARHGEF40Q8TER5 1519 aa31.39■■■□□ 2.62
CLN6-212ENST00000636020 ILDR2Q71H61 639 aa31.38■■■□□ 2.61
CLN6-212ENST00000636020 PLPPR3Q6T4P5 718 aa31.35■■■□□ 2.61
CLN6-212ENST00000636020 DENND4BO75064 1496 aaPredicted RBP31.34■■■□□ 2.61
CLN6-212ENST00000636020 SOCS7O14512 581 aa31.34■■■□□ 2.61
CLN6-212ENST00000636020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.31■■■□□ 2.6
CLN6-212ENST00000636020 HNRNPUL2Q1KMD3 747 aaKnown RBP31.31■■■□□ 2.6
CLN6-212ENST00000636020 FHOD3Q2V2M9 1422 aa31.31■■■□□ 2.6
CLN6-212ENST00000636020 POGZQ7Z3K3 1410 aa31.31■■■□□ 2.6
CLN6-212ENST00000636020 DISP3Q9P2K9 1392 aa31.3■■■□□ 2.6
CLN6-212ENST00000636020 RICTORQ6R327 1708 aa31.29■■■□□ 2.6
CLN6-212ENST00000636020 RAPGEF6Q8TEU7 1601 aa31.28■■■□□ 2.6
CLN6-212ENST00000636020 FANCAO15360 1455 aa31.27■■■□□ 2.6
CLN6-212ENST00000636020 AKNAQ7Z591 1439 aa31.26■■■□□ 2.6
CLN6-212ENST00000636020 SIGLEC1Q9BZZ2 1709 aa31.21■■■□□ 2.59
CLN6-212ENST00000636020 SAMD9Q5K651 1589 aa31.21■■■□□ 2.59
CLN6-212ENST00000636020 NUP153P49790 1475 aaKnown RBP31.21■■■□□ 2.59
CLN6-212ENST00000636020 YEATS2Q9ULM3 1422 aa31.2■■■□□ 2.59
CLN6-212ENST00000636020 ZMYM4Q5VZL5 1548 aa31.19■■■□□ 2.58
CLN6-212ENST00000636020 MLECQ14165 292 aa31.17■■■□□ 2.58
CLN6-212ENST00000636020 ZFYVE16Q7Z3T8 1539 aa31.17■■■□□ 2.58
CLN6-212ENST00000636020 PLEKHD1A6NEE1 506 aa31.16■■■□□ 2.58
CLN6-212ENST00000636020 EFCAB5A4FU69 1503 aa31.15■■■□□ 2.58
CLN6-212ENST00000636020 MAGI2Q86UL8 1455 aa31.14■■■□□ 2.58
CLN6-212ENST00000636020 TTC37Q6PGP7 1564 aa31.14■■■□□ 2.58
CLN6-212ENST00000636020 CFAP74Q9C0B2 1584 aa31.13■■■□□ 2.57
CLN6-212ENST00000636020 FER1L4A9Z1Z3 1794 aa31.12■■■□□ 2.57
CLN6-212ENST00000636020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.09■■■□□ 2.576e-6■■■■□ 21.5
CLN6-212ENST00000636020 DMRT2Q9Y5R5 561 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms