RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 PBRM1Q86U86 1689 aa27.46■■□□□ 1.99
CLN5-206ENST00000635915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.45■■□□□ 1.99
CLN5-206ENST00000635915 IFT140Q96RY7 1462 aa27.43■■□□□ 1.98
CLN5-206ENST00000635915 FHOD3Q2V2M9 1422 aa27.41■■□□□ 1.98
CLN5-206ENST00000635915 THOC2Q8NI27 1593 aaKnown RBP27.4■■□□□ 1.98
CLN5-206ENST00000635915 GRIN2BQ13224 1484 aa27.36■■□□□ 1.97
CLN5-206ENST00000635915 HNRNPUL2Q1KMD3 747 aaKnown RBP27.35■■□□□ 1.97
CLN5-206ENST00000635915 FHAD1B1AJZ9 1412 aa27.34■■□□□ 1.97
CLN5-206ENST00000635915 ZEB1P37275 1124 aaPredicted RBP27.34■■□□□ 1.97
CLN5-206ENST00000635915 ADAMTS12P58397 1594 aa27.33■■□□□ 1.97
CLN5-206ENST00000635915 EFCAB5A4FU69 1503 aa27.32■■□□□ 1.96
CLN5-206ENST00000635915 CCER1Q8TC90 406 aaPredicted RBP27.31■■□□□ 1.96
CLN5-206ENST00000635915 ATP1B4Q9UN42 357 aaPredicted RBP27.29■■□□□ 1.96
CLN5-206ENST00000635915 PCF11O94913 1555 aaKnown RBP27.29■■□□□ 1.96
CLN5-206ENST00000635915 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.96
CLN5-206ENST00000635915 TIAM1Q13009 1591 aa27.25■■□□□ 1.95
CLN5-206ENST00000635915 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
CLN5-206ENST00000635915 SAMD9Q5K651 1589 aa27.2■■□□□ 1.95
CLN5-206ENST00000635915 MAP3K1Q13233 1512 aa27.17■■□□□ 1.94
CLN5-206ENST00000635915 CASKIN1Q8WXD9 1431 aa27.15■■□□□ 1.94
CLN5-206ENST00000635915 FYCO1Q9BQS8 1478 aa27.15■■□□□ 1.94
CLN5-206ENST00000635915 LRRC9Q6ZRR7 1453 aa27.14■■□□□ 1.94
CLN5-206ENST00000635915 FMN1Q68DA7 1419 aa27.14■■□□□ 1.94
CLN5-206ENST00000635915 IQGAP2Q13576 1575 aa27.13■■□□□ 1.93
CLN5-206ENST00000635915 CFAP43Q8NDM7 1665 aa27.11■■□□□ 1.93
CLN5-206ENST00000635915 RRBP1Q9P2E9 1410 aaKnown RBP27.1■■□□□ 1.93
CLN5-206ENST00000635915 GRIN2AQ12879 1464 aa27.07■■□□□ 1.92
CLN5-206ENST00000635915 CCNB3Q8WWL7 1395 aa27.04■■□□□ 1.92
CLN5-206ENST00000635915 FBLN2P98095 1184 aa27.04■■□□□ 1.92
CLN5-206ENST00000635915 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
CLN5-206ENST00000635915 PHLDB1Q86UU1 1377 aa27.02■■□□□ 1.92
CLN5-206ENST00000635915 CHMP7Q8WUX9 453 aaPredicted RBP27.02■■□□□ 1.92
CLN5-206ENST00000635915 LRRIQ1Q96JM4 1722 aa26.99■■□□□ 1.91
CLN5-206ENST00000635915 KIAA0586Q9BVV6 1533 aa26.99■■□□□ 1.91
CLN5-206ENST00000635915 ITGAEP38570 1179 aa26.98■■□□□ 1.91
CLN5-206ENST00000635915 SYNJ2O15056 1496 aa26.97■■□□□ 1.91
CLN5-206ENST00000635915 UGGT2Q9NYU1 1516 aa26.96■■□□□ 1.91
CLN5-206ENST00000635915 CEP170Q5SW79 1584 aa26.92■■□□□ 1.9
CLN5-206ENST00000635915 MTUS2Q5JR59 1369 aa26.89■■□□□ 1.9
CLN5-206ENST00000635915 DISP1Q96F81 1524 aa26.89■■□□□ 1.89
CLN5-206ENST00000635915 ARID3CA6NKF2 412 aa26.86■■□□□ 1.89
CLN5-206ENST00000635915 FAM50AQ14320 339 aaKnown RBP26.86■■□□□ 1.89
CLN5-206ENST00000635915 KIAA0556O60303 1618 aa26.85■■□□□ 1.89
CLN5-206ENST00000635915 NUP160Q12769 1436 aa26.8■■□□□ 1.88
CLN5-206ENST00000635915 HECW1Q76N89 1606 aa26.8■■□□□ 1.88
CLN5-206ENST00000635915 MAGI3Q5TCQ9 1506 aa26.78■■□□□ 1.88
CLN5-206ENST00000635915 CDK13Q14004 1512 aaKnown RBP26.77■■□□□ 1.88
CLN5-206ENST00000635915 EPRSP07814 1512 aaKnown RBP26.77■■□□□ 1.88
CLN5-206ENST00000635915 CCDC18Q5T9S5 1454 aa26.76■■□□□ 1.87
CLN5-206ENST00000635915 NCOA2Q15596 1464 aa26.74■■□□□ 1.87
CLN5-206ENST00000635915 JPH4Q96JJ6 628 aa26.74■■□□□ 1.87
CLN5-206ENST00000635915 EHBP1L1Q8N3D4 1523 aa26.72■■□□□ 1.87
CLN5-206ENST00000635915 FGD6Q6ZV73 1430 aa26.72■■□□□ 1.87
CLN5-206ENST00000635915 DHX57Q6P158 1386 aaKnown RBP26.71■■□□□ 1.87
CLN5-206ENST00000635915 SUPT6HQ7KZ85 1726 aaKnown RBP26.69■■□□□ 1.86
CLN5-206ENST00000635915 RAB3GAP2Q9H2M9 1393 aa26.66■■□□□ 1.86
CLN5-206ENST00000635915 NUP153P49790 1475 aaKnown RBP26.66■■□□□ 1.86
CLN5-206ENST00000635915 MYOM3Q5VTT5 1437 aa26.65■■□□□ 1.86
CLN5-206ENST00000635915 RAPGEF6Q8TEU7 1601 aa26.64■■□□□ 1.86
CLN5-206ENST00000635915 CARMIL2Q6F5E8 1435 aa26.63■■□□□ 1.85
CLN5-206ENST00000635915 PLB1Q6P1J6 1458 aa26.62■■□□□ 1.85
CLN5-206ENST00000635915 CHD1O14646 1710 aa26.61■■□□□ 1.85
CLN5-206ENST00000635915 ARHGEF11O15085 1522 aa26.61■■□□□ 1.85
CLN5-206ENST00000635915 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.6■■□□□ 1.85
CLN5-206ENST00000635915 SETD5Q9C0A6 1442 aa26.59■■□□□ 1.85
CLN5-206ENST00000635915 PTPRKQ15262 1439 aa26.53■■□□□ 1.84
CLN5-206ENST00000635915 PTPN23Q9H3S7 1636 aa26.52■■□□□ 1.84
CLN5-206ENST00000635915 PRG4Q92954 1404 aaPredicted RBP26.52■■□□□ 1.84
CLN5-206ENST00000635915 CLSPNQ9HAW4 1339 aa26.51■■□□□ 1.83
CLN5-206ENST00000635915 CDK11AQ9UQ88 783 aaPredicted RBP26.45■■□□□ 1.82
CLN5-206ENST00000635915 ABCA8O94911 1581 aa26.41■■□□□ 1.82
CLN5-206ENST00000635915 TCOF1Q13428 1488 aaKnown RBP26.4■■□□□ 1.82
CLN5-206ENST00000635915 MAPKBP1O60336 1514 aa26.39■■□□□ 1.82
CLN5-206ENST00000635915 PTPRGP23470 1445 aa26.39■■□□□ 1.81
CLN5-206ENST00000635915 TROQ12816 1431 aaPredicted RBP26.39■■□□□ 1.81
CLN5-206ENST00000635915 CHIC2Q9UKJ5 165 aa26.38■■□□□ 1.81
CLN5-206ENST00000635915 MIA2Q96PC5 1412 aa26.38■■□□□ 1.81
CLN5-206ENST00000635915 HFM1A2PYH4 1435 aa26.36■■□□□ 1.81
CLN5-206ENST00000635915 ZNF644Q9H582 1327 aaPredicted RBP26.35■■□□□ 1.81
CLN5-206ENST00000635915 ATP10BO94823 1461 aa26.34■■□□□ 1.81
CLN5-206ENST00000635915 ERCC6L2Q5T890 1561 aa26.34■■□□□ 1.81
CLN5-206ENST00000635915 SHROOM2Q13796 1616 aa26.33■■□□□ 1.81
CLN5-206ENST00000635915 KIF14Q15058 1648 aa26.33■■□□□ 1.81
CLN5-206ENST00000635915 NAIPQ13075 1403 aa26.33■■□□□ 1.8
CLN5-206ENST00000635915 RRP7BPQ9NSQ0 103 aa26.32■■□□□ 1.8
CLN5-206ENST00000635915 ZNF316A6NFI3 1004 aaPredicted RBP26.31■■□□□ 1.8
CLN5-206ENST00000635915 PLEKHD1A6NEE1 506 aa26.27■■□□□ 1.8
CLN5-206ENST00000635915 SIN3AQ96ST3 1273 aa26.25■■□□□ 1.79
CLN5-206ENST00000635915 DIEXFQ68CQ4 756 aaKnown RBP26.24■■□□□ 1.79
CLN5-206ENST00000635915 ADCY10Q96PN6 1610 aa26.24■■□□□ 1.79
CLN5-206ENST00000635915 CFDP1Q9UEE9 299 aaPredicted RBP26.23■■□□□ 1.79
CLN5-206ENST00000635915 GPATCH8Q9UKJ3 1502 aaKnown RBP26.23■■□□□ 1.79
CLN5-206ENST00000635915 CLASP1Q7Z460 1538 aa26.23■■□□□ 1.79
CLN5-206ENST00000635915 NEUROD1Q13562 356 aa26.21■■□□□ 1.79
CLN5-206ENST00000635915 ZNF777Q9ULD5 760 aaPredicted RBP26.21■■□□□ 1.79
CLN5-206ENST00000635915 UACAQ9BZF9 1416 aa26.2■■□□□ 1.79
CLN5-206ENST00000635915 DAPK1P53355 1430 aa26.2■■□□□ 1.78
CLN5-206ENST00000635915 ABCC5O15440 1437 aa26.18■■□□□ 1.78
CLN5-206ENST00000635915 KDM6BO15054 1643 aa26.17■■□□□ 1.78
CLN5-206ENST00000635915 CAMSAP2Q08AD1 1489 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms