RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.58e-7■■■□□ 16.1
TP53-228ENST00000635293 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
TP53-228ENST00000635293 MAGI1Q96QZ7 1491 aaPredicted RBP18.13■□□□□ 0.49
TP53-228ENST00000635293 SAMD9Q5K651 1589 aa18.12■□□□□ 0.49
TP53-228ENST00000635293 SNAPC4Q5SXM2 1469 aa18.11■□□□□ 0.49
TP53-228ENST00000635293 RANGAP1P46060 587 aaPredicted RBP18.11■□□□□ 0.49
TP53-228ENST00000635293 IQGAP2Q13576 1575 aa18.08■□□□□ 0.48
TP53-228ENST00000635293 MAP3K1Q13233 1512 aa18.05■□□□□ 0.48
TP53-228ENST00000635293 APLP2Q06481 763 aa18.04■□□□□ 0.48
TP53-228ENST00000635293 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
TP53-228ENST00000635293 SYNJ2O15056 1496 aa18.03■□□□□ 0.48
TP53-228ENST00000635293 PCF11O94913 1555 aaKnown RBP18.02■□□□□ 0.48
TP53-228ENST00000635293 CFAP43Q8NDM7 1665 aa18.02■□□□□ 0.47
TP53-228ENST00000635293 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
TP53-228ENST00000635293 HRCP23327 699 aa17.99■□□□□ 0.47
TP53-228ENST00000635293 FYCO1Q9BQS8 1478 aa17.99■□□□□ 0.47
TP53-228ENST00000635293 UGGT2Q9NYU1 1516 aa17.99■□□□□ 0.47
TP53-228ENST00000635293 FHOD3Q2V2M9 1422 aa17.98■□□□□ 0.47
TP53-228ENST00000635293 TIAM1Q13009 1591 aa17.98■□□□□ 0.47
TP53-228ENST00000635293 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
TP53-228ENST00000635293 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
TP53-228ENST00000635293 CASKIN1Q8WXD9 1431 aa17.95■□□□□ 0.46
TP53-228ENST00000635293 CEP170Q5SW79 1584 aa17.93■□□□□ 0.46
TP53-228ENST00000635293 NUP160Q12769 1436 aa17.91■□□□□ 0.46
TP53-228ENST00000635293 KIAA0556O60303 1618 aa17.89■□□□□ 0.46
TP53-228ENST00000635293 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
TP53-228ENST00000635293 CHD1O14646 1710 aa17.86■□□□□ 0.45
TP53-228ENST00000635293 CHMP7Q8WUX9 453 aaPredicted RBP17.86■□□□□ 0.45
TP53-228ENST00000635293 HECW1Q76N89 1606 aa17.85■□□□□ 0.45
TP53-228ENST00000635293 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
TP53-228ENST00000635293 LRRC9Q6ZRR7 1453 aa17.85■□□□□ 0.45
TP53-228ENST00000635293 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
TP53-228ENST00000635293 DISP1Q96F81 1524 aa17.83■□□□□ 0.44
TP53-228ENST00000635293 CCDC18Q5T9S5 1454 aa17.8■□□□□ 0.44
TP53-228ENST00000635293 KANK4Q5T7N3 995 aaPredicted RBP17.8■□□□□ 0.44
TP53-228ENST00000635293 RRBP1Q9P2E9 1410 aaKnown RBP17.78■□□□□ 0.44
TP53-228ENST00000635293 EHBP1L1Q8N3D4 1523 aa17.74■□□□□ 0.43
TP53-228ENST00000635293 FBLN2P98095 1184 aa17.74■□□□□ 0.43
TP53-228ENST00000635293 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
TP53-228ENST00000635293 RAPGEF6Q8TEU7 1601 aa17.73■□□□□ 0.43
TP53-228ENST00000635293 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
TP53-228ENST00000635293 SUPT6HQ7KZ85 1726 aaKnown RBP17.71■□□□□ 0.43
TP53-228ENST00000635293 EPRSP07814 1512 aaKnown RBP17.69■□□□□ 0.42
TP53-228ENST00000635293 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
TP53-228ENST00000635293 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
TP53-228ENST00000635293 MTUS2Q5JR59 1369 aa17.66■□□□□ 0.42
TP53-228ENST00000635293 JPH4Q96JJ6 628 aa17.65■□□□□ 0.42
TP53-228ENST00000635293 ZEB1P37275 1124 aaPredicted RBP17.65■□□□□ 0.42
TP53-228ENST00000635293 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
TP53-228ENST00000635293 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
TP53-228ENST00000635293 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
TP53-228ENST00000635293 ARHGEF11O15085 1522 aa17.63■□□□□ 0.41
TP53-228ENST00000635293 CDK13Q14004 1512 aaKnown RBP17.62■□□□□ 0.41
TP53-228ENST00000635293 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
TP53-228ENST00000635293 ABCA8O94911 1581 aa17.62■□□□□ 0.41
TP53-228ENST00000635293 NCOA2Q15596 1464 aa17.6■□□□□ 0.41
TP53-228ENST00000635293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.59■□□□□ 0.41
TP53-228ENST00000635293 PRG4Q92954 1404 aaPredicted RBP17.59■□□□□ 0.41
TP53-228ENST00000635293 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
TP53-228ENST00000635293 MYOM3Q5VTT5 1437 aa17.56■□□□□ 0.4
TP53-228ENST00000635293 FGD6Q6ZV73 1430 aa17.56■□□□□ 0.4
TP53-228ENST00000635293 PLB1Q6P1J6 1458 aa17.56■□□□□ 0.4
TP53-228ENST00000635293 ADCY10Q96PN6 1610 aa17.55■□□□□ 0.4
TP53-228ENST00000635293 PTPN23Q9H3S7 1636 aa17.51■□□□□ 0.39
TP53-228ENST00000635293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
TP53-228ENST00000635293 CCER1Q8TC90 406 aaPredicted RBP17.5■□□□□ 0.39
TP53-228ENST00000635293 PTPRGP23470 1445 aa17.49■□□□□ 0.39
TP53-228ENST00000635293 ITSN2Q9NZM3 1697 aa17.48■□□□□ 0.39
TP53-228ENST00000635293 CDK11AQ9UQ88 783 aaPredicted RBP17.48■□□□□ 0.39
TP53-228ENST00000635293 TCOF1Q13428 1488 aaKnown RBP17.48■□□□□ 0.39
TP53-228ENST00000635293 TROQ12816 1431 aaPredicted RBP17.48■□□□□ 0.39
TP53-228ENST00000635293 MIA2Q96PC5 1412 aa17.46■□□□□ 0.39
TP53-228ENST00000635293 ERCC6L2Q5T890 1561 aa17.46■□□□□ 0.39
TP53-228ENST00000635293 UACAQ9BZF9 1416 aa17.43■□□□□ 0.38
TP53-228ENST00000635293 ABCC2Q92887 1545 aa17.43■□□□□ 0.38
TP53-228ENST00000635293 KIF14Q15058 1648 aa17.43■□□□□ 0.38
TP53-228ENST00000635293 ATP10BO94823 1461 aa17.42■□□□□ 0.38
TP53-228ENST00000635293 FAM50AQ14320 339 aaKnown RBP17.42■□□□□ 0.38
TP53-228ENST00000635293 ARID3CA6NKF2 412 aa17.39■□□□□ 0.37
TP53-228ENST00000635293 UHRF1BP1LA0JNW5 1464 aa17.39■□□□□ 0.37
TP53-228ENST00000635293 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
TP53-228ENST00000635293 CLSPNQ9HAW4 1339 aa17.35■□□□□ 0.37
TP53-228ENST00000635293 GCC2Q8IWJ2 1684 aa17.35■□□□□ 0.37
TP53-228ENST00000635293 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
TP53-228ENST00000635293 ITGAEP38570 1179 aa17.35■□□□□ 0.37
TP53-228ENST00000635293 DNMT1P26358 1616 aaKnown RBP17.34■□□□□ 0.37
TP53-228ENST00000635293 AKNAQ7Z591 1439 aa17.33■□□□□ 0.37
TP53-228ENST00000635293 ABCC10Q5T3U5 1492 aa17.33■□□□□ 0.36
TP53-228ENST00000635293 DHX57Q6P158 1386 aaKnown RBP17.33■□□□□ 0.36
TP53-228ENST00000635293 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
TP53-228ENST00000635293 ZCCHC11Q5TAX3 1644 aaKnown RBP17.32■□□□□ 0.36
TP53-228ENST00000635293 HFM1A2PYH4 1435 aa17.32■□□□□ 0.36
TP53-228ENST00000635293 PLEKHD1A6NEE1 506 aa17.31■□□□□ 0.36
TP53-228ENST00000635293 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
TP53-228ENST00000635293 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
TP53-228ENST00000635293 CROCC2H7BZ55 1655 aa17.29■□□□□ 0.36
TP53-228ENST00000635293 PTPRKQ15262 1439 aa17.29■□□□□ 0.36
TP53-228ENST00000635293 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
TP53-228ENST00000635293 CAMSAP2Q08AD1 1489 aa17.28■□□□□ 0.36
TP53-228ENST00000635293 ADGBQ8N7X0 1667 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms