RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
LINC00339-206ENST00000634451 ADCY10Q96PN6 1610 aa22.9■■□□□ 1.26
LINC00339-206ENST00000634451 IGF1RP08069 1367 aa22.87■■□□□ 1.25
LINC00339-206ENST00000634451 FAM69CQ0P6D2 419 aa22.84■■□□□ 1.25
LINC00339-206ENST00000634451 ABCC10Q5T3U5 1492 aa22.84■■□□□ 1.25
LINC00339-206ENST00000634451 DIP2BQ9P265 1576 aa22.82■■□□□ 1.24
LINC00339-206ENST00000634451 KIAA0586Q9BVV6 1533 aa22.81■■□□□ 1.24
LINC00339-206ENST00000634451 MAPKBP1O60336 1514 aa22.8■■□□□ 1.24
LINC00339-206ENST00000634451 KIF27Q86VH2 1401 aa22.79■■□□□ 1.24
LINC00339-206ENST00000634451 CUL7Q14999 1698 aa22.77■■□□□ 1.24
LINC00339-206ENST00000634451 TTBK1Q5TCY1 1321 aaPredicted RBP22.75■■□□□ 1.23
LINC00339-206ENST00000634451 TSPOAP1O95153 1857 aa22.73■■□□□ 1.23
LINC00339-206ENST00000634451 NPM1P06748 294 aaKnown RBP eCLIP22.73■■□□□ 1.23
LINC00339-206ENST00000634451 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
LINC00339-206ENST00000634451 PTPRGP23470 1445 aa22.65■■□□□ 1.22
LINC00339-206ENST00000634451 KDM6BO15054 1643 aa22.64■■□□□ 1.22
LINC00339-206ENST00000634451 IQGAP2Q13576 1575 aa22.59■■□□□ 1.21
LINC00339-206ENST00000634451 KDM4FA0A1W2PPD8 638 aa22.58■■□□□ 1.21
LINC00339-206ENST00000634451 TNIKQ9UKE5 1360 aa22.58■■□□□ 1.21
LINC00339-206ENST00000634451 ABCC2Q92887 1545 aa22.57■■□□□ 1.2
LINC00339-206ENST00000634451 DISP1Q96F81 1524 aa22.56■■□□□ 1.2
LINC00339-206ENST00000634451 PPRC1Q5VV67 1664 aaKnown RBP22.55■■□□□ 1.2
LINC00339-206ENST00000634451 ASXL2Q76L83 1435 aa22.55■■□□□ 1.2
LINC00339-206ENST00000634451 CARMIL2Q6F5E8 1435 aa22.53■■□□□ 1.2
LINC00339-206ENST00000634451 UACAQ9BZF9 1416 aa22.48■■□□□ 1.19
LINC00339-206ENST00000634451 UHRF1BP1LA0JNW5 1464 aa22.47■■□□□ 1.19
LINC00339-206ENST00000634451 GLI2P10070 1586 aa22.45■■□□□ 1.18
LINC00339-206ENST00000634451 PLB1Q6P1J6 1458 aa22.44■■□□□ 1.18
LINC00339-206ENST00000634451 COL17A1Q9UMD9 1497 aaPredicted RBP22.44■■□□□ 1.18
LINC00339-206ENST00000634451 RAPGEF2Q9Y4G8 1499 aa22.44■■□□□ 1.18
LINC00339-206ENST00000634451 KIAA0556O60303 1618 aa22.43■■□□□ 1.18
LINC00339-206ENST00000634451 UGGT2Q9NYU1 1516 aa22.43■■□□□ 1.18
LINC00339-206ENST00000634451 ZCCHC11Q5TAX3 1644 aaKnown RBP22.42■■□□□ 1.18
LINC00339-206ENST00000634451 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
LINC00339-206ENST00000634451 KDM5BQ9UGL1 1544 aa22.41■■□□□ 1.18
LINC00339-206ENST00000634451 MAP3K4Q9Y6R4 1608 aa22.38■■□□□ 1.17
LINC00339-206ENST00000634451 ADGRL1O94910 1474 aa22.33■■□□□ 1.16
LINC00339-206ENST00000634451 CTTNBP2Q8WZ74 1663 aa22.3■■□□□ 1.16
LINC00339-206ENST00000634451 WDR7Q9Y4E6 1490 aa22.27■■□□□ 1.16
LINC00339-206ENST00000634451 ABCA8O94911 1581 aa22.23■■□□□ 1.15
LINC00339-206ENST00000634451 TEX14Q8IWB6 1497 aa22.22■■□□□ 1.15
LINC00339-206ENST00000634451 PRXQ9BXM0 1461 aa22.2■■□□□ 1.14
LINC00339-206ENST00000634451 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
LINC00339-206ENST00000634451 KCNH8Q96L42 1107 aa22.19■■□□□ 1.14
LINC00339-206ENST00000634451 GOLGA3Q08378 1498 aa22.15■■□□□ 1.14
LINC00339-206ENST00000634451 CD109Q6YHK3 1445 aa22.14■■□□□ 1.14
LINC00339-206ENST00000634451 P3H3Q8IVL6 736 aa22.14■■□□□ 1.13
LINC00339-206ENST00000634451 CFAP43Q8NDM7 1665 aa22.12■■□□□ 1.13
LINC00339-206ENST00000634451 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
LINC00339-206ENST00000634451 ILDR1Q86SU0 546 aaPredicted RBP22.1■■□□□ 1.13
LINC00339-206ENST00000634451 HECW2Q9P2P5 1572 aa22.1■■□□□ 1.13
LINC00339-206ENST00000634451 KIF21BO75037 1637 aa22.06■■□□□ 1.12
LINC00339-206ENST00000634451 ATP10BO94823 1461 aa22.04■■□□□ 1.12
LINC00339-206ENST00000634451 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
LINC00339-206ENST00000634451 RANGAP1P46060 587 aaPredicted RBP21.96■■□□□ 1.11
LINC00339-206ENST00000634451 ARAP3Q8WWN8 1544 aa21.95■■□□□ 1.1
LINC00339-206ENST00000634451 ABCA9Q8IUA7 1624 aa21.95■■□□□ 1.1
LINC00339-206ENST00000634451 RAPGEF6Q8TEU7 1601 aa21.94■■□□□ 1.1
LINC00339-206ENST00000634451 CSRNP3Q8WYN3 585 aa21.92■■□□□ 1.1
LINC00339-206ENST00000634451 RAPGEF3O95398 923 aa21.91■■□□□ 1.1
LINC00339-206ENST00000634451 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
LINC00339-206ENST00000634451 FHOD3Q2V2M9 1422 aa21.89■■□□□ 1.1
LINC00339-206ENST00000634451 FRMPD1Q5SYB0 1578 aa21.89■■□□□ 1.09
LINC00339-206ENST00000634451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.85■■□□□ 1.09
LINC00339-206ENST00000634451 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
LINC00339-206ENST00000634451 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
LINC00339-206ENST00000634451 ADAMTSL3P82987 1691 aa21.83■■□□□ 1.09
LINC00339-206ENST00000634451 NEO1Q92859 1461 aa21.8■■□□□ 1.08
LINC00339-206ENST00000634451 PTPRMP28827 1452 aa21.79■■□□□ 1.08
LINC00339-206ENST00000634451 MADDQ8WXG6 1647 aa21.77■■□□□ 1.07
LINC00339-206ENST00000634451 BCORL1Q5H9F3 1711 aa21.76■■□□□ 1.07
LINC00339-206ENST00000634451 PHLDB1Q86UU1 1377 aa21.74■■□□□ 1.07
LINC00339-206ENST00000634451 TTC37Q6PGP7 1564 aa21.74■■□□□ 1.07
LINC00339-206ENST00000634451 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
LINC00339-206ENST00000634451 RICTORQ6R327 1708 aa21.72■■□□□ 1.07
LINC00339-206ENST00000634451 SIGLEC1Q9BZZ2 1709 aa21.72■■□□□ 1.07
LINC00339-206ENST00000634451 CDK13Q14004 1512 aaKnown RBP21.72■■□□□ 1.07
LINC00339-206ENST00000634451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.72■■□□□ 1.07
LINC00339-206ENST00000634451 ARHGEF40Q8TER5 1519 aa21.71■■□□□ 1.07
LINC00339-206ENST00000634451 ARID4BQ4LE39 1312 aaPredicted RBP21.71■■□□□ 1.07
LINC00339-206ENST00000634451 EEA1Q15075 1411 aa21.7■■□□□ 1.06
LINC00339-206ENST00000634451 AKNAQ7Z591 1439 aa21.68■■□□□ 1.06
LINC00339-206ENST00000634451 DENND4BO75064 1496 aaPredicted RBP21.68■■□□□ 1.06
LINC00339-206ENST00000634451 RIMS1Q86UR5 1692 aaKnown RBP21.68■■□□□ 1.06
LINC00339-206ENST00000634451 FANCAO15360 1455 aa21.67■■□□□ 1.06
LINC00339-206ENST00000634451 PLEKHD1A6NEE1 506 aa21.67■■□□□ 1.06
LINC00339-206ENST00000634451 YEATS2Q9ULM3 1422 aa21.65■■□□□ 1.06
LINC00339-206ENST00000634451 LMTK3Q96Q04 1460 aa21.64■■□□□ 1.06
LINC00339-206ENST00000634451 PLPPR3Q6T4P5 718 aa21.64■■□□□ 1.05
LINC00339-206ENST00000634451 EFCAB5A4FU69 1503 aa21.64■■□□□ 1.05
LINC00339-206ENST00000634451 PCF11O94913 1555 aaKnown RBP21.63■■□□□ 1.05
LINC00339-206ENST00000634451 ZMYM4Q5VZL5 1548 aa21.6■■□□□ 1.05
LINC00339-206ENST00000634451 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
LINC00339-206ENST00000634451 CFAP74Q9C0B2 1584 aa21.58■■□□□ 1.05
LINC00339-206ENST00000634451 HECW1Q76N89 1606 aa21.58■■□□□ 1.04
LINC00339-206ENST00000634451 HSPA2P54652 639 aa21.57■■□□□ 1.04
LINC00339-206ENST00000634451 MLECQ14165 292 aa21.55■■□□□ 1.04
LINC00339-206ENST00000634451 ARHGAP35Q9NRY4 1499 aa21.54■■□□□ 1.04
LINC00339-206ENST00000634451 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
LINC00339-206ENST00000634451 KIF14Q15058 1648 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms