RNA–Protein interactions for RNA: ENST00000634255.1

LINC01649-202, Transcript of long intergenic non-protein coding RNA 1649, humanhuman

TSL 5 BASIC

Gene LINC01649, Length 1,743 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01649-202ENST00000634255 IFT140Q96RY7 1462 aa20.34■□□□□ 0.85
LINC01649-202ENST00000634255 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.84
LINC01649-202ENST00000634255 ERCC6Q03468 1493 aa20.28■□□□□ 0.84
LINC01649-202ENST00000634255 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
LINC01649-202ENST00000634255 ADAMTS12P58397 1594 aa20.24■□□□□ 0.83
LINC01649-202ENST00000634255 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
LINC01649-202ENST00000634255 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
LINC01649-202ENST00000634255 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.83
LINC01649-202ENST00000634255 SAMD9Q5K651 1589 aa20.21■□□□□ 0.83
LINC01649-202ENST00000634255 FYCO1Q9BQS8 1478 aa20.2■□□□□ 0.82
LINC01649-202ENST00000634255 KANK4Q5T7N3 995 aaPredicted RBP20.19■□□□□ 0.82
LINC01649-202ENST00000634255 CFAP43Q8NDM7 1665 aa20.19■□□□□ 0.82
LINC01649-202ENST00000634255 CCER1Q8TC90 406 aaPredicted RBP20.19■□□□□ 0.82
LINC01649-202ENST00000634255 FMN1Q68DA7 1419 aa20.18■□□□□ 0.82
LINC01649-202ENST00000634255 PCF11O94913 1555 aaKnown RBP20.18■□□□□ 0.82
LINC01649-202ENST00000634255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
LINC01649-202ENST00000634255 CASKIN1Q8WXD9 1431 aa20.17■□□□□ 0.82
LINC01649-202ENST00000634255 FHOD3Q2V2M9 1422 aa20.16■□□□□ 0.82
LINC01649-202ENST00000634255 RRBP1Q9P2E9 1410 aaKnown RBP20.16■□□□□ 0.82
LINC01649-202ENST00000634255 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
LINC01649-202ENST00000634255 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
LINC01649-202ENST00000634255 LRRC9Q6ZRR7 1453 aa20.13■□□□□ 0.81
LINC01649-202ENST00000634255 IQGAP2Q13576 1575 aa20.11■□□□□ 0.81
LINC01649-202ENST00000634255 P3H3Q8IVL6 736 aa20.1■□□□□ 0.81
LINC01649-202ENST00000634255 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
LINC01649-202ENST00000634255 SNAPC4Q5SXM2 1469 aa20.07■□□□□ 0.8
LINC01649-202ENST00000634255 MAGI1Q96QZ7 1491 aaPredicted RBP20.06■□□□□ 0.8
LINC01649-202ENST00000634255 CCNB3Q8WWL7 1395 aa20.05■□□□□ 0.8
LINC01649-202ENST00000634255 UGGT2Q9NYU1 1516 aa20.03■□□□□ 0.8
LINC01649-202ENST00000634255 GRIN2AQ12879 1464 aa20.01■□□□□ 0.79
LINC01649-202ENST00000634255 KIAA0586Q9BVV6 1533 aa20.01■□□□□ 0.79
LINC01649-202ENST00000634255 SYNJ2O15056 1496 aa19.97■□□□□ 0.79
LINC01649-202ENST00000634255 ATP1B4Q9UN42 357 aaPredicted RBP19.96■□□□□ 0.79
LINC01649-202ENST00000634255 CCDC18Q5T9S5 1454 aa19.94■□□□□ 0.78
LINC01649-202ENST00000634255 HECW1Q76N89 1606 aa19.93■□□□□ 0.78
LINC01649-202ENST00000634255 LRRIQ1Q96JM4 1722 aa19.93■□□□□ 0.78
LINC01649-202ENST00000634255 PHLDB1Q86UU1 1377 aa19.92■□□□□ 0.78
LINC01649-202ENST00000634255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.91■□□□□ 0.78
LINC01649-202ENST00000634255 CLSPNQ9HAW4 1339 aa19.89■□□□□ 0.78
LINC01649-202ENST00000634255 KIAA0556O60303 1618 aa19.89■□□□□ 0.77
LINC01649-202ENST00000634255 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
LINC01649-202ENST00000634255 MTUS2Q5JR59 1369 aa19.88■□□□□ 0.77
LINC01649-202ENST00000634255 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
LINC01649-202ENST00000634255 DISP1Q96F81 1524 aa19.86■□□□□ 0.77
LINC01649-202ENST00000634255 NUP160Q12769 1436 aa19.85■□□□□ 0.77
LINC01649-202ENST00000634255 CEP170Q5SW79 1584 aa19.85■□□□□ 0.77
LINC01649-202ENST00000634255 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
LINC01649-202ENST00000634255 EPRSP07814 1512 aaKnown RBP19.81■□□□□ 0.76
LINC01649-202ENST00000634255 FGD6Q6ZV73 1430 aa19.8■□□□□ 0.76
LINC01649-202ENST00000634255 NCOA2Q15596 1464 aa19.79■□□□□ 0.76
LINC01649-202ENST00000634255 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
LINC01649-202ENST00000634255 DHX57Q6P158 1386 aaKnown RBP19.79■□□□□ 0.76
LINC01649-202ENST00000634255 MYOM3Q5VTT5 1437 aa19.77■□□□□ 0.75
LINC01649-202ENST00000634255 FAM50AQ14320 339 aaKnown RBP19.76■□□□□ 0.75
LINC01649-202ENST00000634255 CARMIL2Q6F5E8 1435 aa19.75■□□□□ 0.75
LINC01649-202ENST00000634255 RAPGEF6Q8TEU7 1601 aa19.75■□□□□ 0.75
LINC01649-202ENST00000634255 SETD5Q9C0A6 1442 aa19.75■□□□□ 0.75
LINC01649-202ENST00000634255 MAGI3Q5TCQ9 1506 aa19.74■□□□□ 0.75
LINC01649-202ENST00000634255 FBLN2P98095 1184 aa19.73■□□□□ 0.75
LINC01649-202ENST00000634255 ITGAEP38570 1179 aa19.73■□□□□ 0.75
LINC01649-202ENST00000634255 RAB3GAP2Q9H2M9 1393 aa19.71■□□□□ 0.75
LINC01649-202ENST00000634255 CDK13Q14004 1512 aaKnown RBP19.69■□□□□ 0.74
LINC01649-202ENST00000634255 JPH4Q96JJ6 628 aa19.69■□□□□ 0.74
LINC01649-202ENST00000634255 NUP153P49790 1475 aaKnown RBP19.68■□□□□ 0.74
LINC01649-202ENST00000634255 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
LINC01649-202ENST00000634255 TCOF1Q13428 1488 aaKnown RBP19.66■□□□□ 0.74
LINC01649-202ENST00000634255 MIA2Q96PC5 1412 aa19.65■□□□□ 0.74
LINC01649-202ENST00000634255 CDK11AQ9UQ88 783 aaPredicted RBP19.65■□□□□ 0.74
LINC01649-202ENST00000634255 CHD1O14646 1710 aa19.63■□□□□ 0.73
LINC01649-202ENST00000634255 HFM1A2PYH4 1435 aa19.59■□□□□ 0.73
LINC01649-202ENST00000634255 ABCA8O94911 1581 aa19.58■□□□□ 0.72
LINC01649-202ENST00000634255 PLB1Q6P1J6 1458 aa19.58■□□□□ 0.72
LINC01649-202ENST00000634255 TROQ12816 1431 aaPredicted RBP19.56■□□□□ 0.72
LINC01649-202ENST00000634255 ZNF316A6NFI3 1004 aaPredicted RBP19.55■□□□□ 0.72
LINC01649-202ENST00000634255 ADCY10Q96PN6 1610 aa19.55■□□□□ 0.72
LINC01649-202ENST00000634255 MAPKBP1O60336 1514 aa19.55■□□□□ 0.72
LINC01649-202ENST00000634255 SHROOM2Q13796 1616 aa19.54■□□□□ 0.72
LINC01649-202ENST00000634255 PTPRKQ15262 1439 aa19.54■□□□□ 0.72
LINC01649-202ENST00000634255 AKNAQ7Z591 1439 aa19.54■□□□□ 0.72
LINC01649-202ENST00000634255 PRG4Q92954 1404 aaPredicted RBP19.53■□□□□ 0.72
LINC01649-202ENST00000634255 ITSN2Q9NZM3 1697 aa19.51■□□□□ 0.71
LINC01649-202ENST00000634255 ARID3CA6NKF2 412 aa19.5■□□□□ 0.71
LINC01649-202ENST00000634255 NAIPQ13075 1403 aa19.5■□□□□ 0.71
LINC01649-202ENST00000634255 GCC2Q8IWJ2 1684 aa19.49■□□□□ 0.71
LINC01649-202ENST00000634255 PTPRGP23470 1445 aa19.47■□□□□ 0.71
LINC01649-202ENST00000634255 UACAQ9BZF9 1416 aa19.46■□□□□ 0.71
LINC01649-202ENST00000634255 ACIN1Q9UKV3 1341 aaKnown RBP19.46■□□□□ 0.71
LINC01649-202ENST00000634255 DIEXFQ68CQ4 756 aaKnown RBP19.45■□□□□ 0.7
LINC01649-202ENST00000634255 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
LINC01649-202ENST00000634255 ATP10BO94823 1461 aa19.44■□□□□ 0.7
LINC01649-202ENST00000634255 TIMELESSQ9UNS1 1208 aa19.44■□□□□ 0.7
LINC01649-202ENST00000634255 KIF14Q15058 1648 aa19.42■□□□□ 0.7
LINC01649-202ENST00000634255 PLEKHD1A6NEE1 506 aa19.42■□□□□ 0.7
LINC01649-202ENST00000634255 ROCK1Q13464 1354 aa19.42■□□□□ 0.7
LINC01649-202ENST00000634255 CLASP1Q7Z460 1538 aa19.4■□□□□ 0.7
LINC01649-202ENST00000634255 DAPK1P53355 1430 aa19.4■□□□□ 0.7
LINC01649-202ENST00000634255 GPATCH8Q9UKJ3 1502 aaKnown RBP19.4■□□□□ 0.7
LINC01649-202ENST00000634255 ABCC5O15440 1437 aa19.36■□□□□ 0.69
LINC01649-202ENST00000634255 CAMSAP2Q08AD1 1489 aa19.36■□□□□ 0.69
LINC01649-202ENST00000634255 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms