RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-223ENST00000631247 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
UBE3A-223ENST00000631247 TOP2BQ02880 1626 aa18.43■□□□□ 0.54
UBE3A-223ENST00000631247 TRHP20396 242 aaPredicted RBP18.36■□□□□ 0.53
UBE3A-223ENST00000631247 ADAMTS12P58397 1594 aa18.36■□□□□ 0.53
UBE3A-223ENST00000631247 GRIN2AQ12879 1464 aa18.34■□□□□ 0.53
UBE3A-223ENST00000631247 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
UBE3A-223ENST00000631247 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
UBE3A-223ENST00000631247 CEP170Q5SW79 1584 aa18.27■□□□□ 0.52
UBE3A-223ENST00000631247 NUP160Q12769 1436 aa18.23■□□□□ 0.51
UBE3A-223ENST00000631247 ERCC6L2Q5T890 1561 aa18.2■□□□□ 0.5
UBE3A-223ENST00000631247 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
UBE3A-223ENST00000631247 SHROOM2Q13796 1616 aa18.18■□□□□ 0.5
UBE3A-223ENST00000631247 RUSC2Q8N2Y8 1516 aa18.11■□□□□ 0.49
UBE3A-223ENST00000631247 HOXD11P31277 338 aaPredicted RBP18.1■□□□□ 0.49
UBE3A-223ENST00000631247 CUL7Q14999 1698 aa18.08■□□□□ 0.48
UBE3A-223ENST00000631247 KIF27Q86VH2 1401 aa18.07■□□□□ 0.48
UBE3A-223ENST00000631247 PRG4Q92954 1404 aaPredicted RBP18.07■□□□□ 0.48
UBE3A-223ENST00000631247 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
UBE3A-223ENST00000631247 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
UBE3A-223ENST00000631247 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
UBE3A-223ENST00000631247 IGF1RP08069 1367 aa17.98■□□□□ 0.47
UBE3A-223ENST00000631247 KIAA0586Q9BVV6 1533 aa17.96■□□□□ 0.47
UBE3A-223ENST00000631247 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
UBE3A-223ENST00000631247 NPM1P06748 294 aaKnown RBP eCLIP17.91■□□□□ 0.46
UBE3A-223ENST00000631247 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
UBE3A-223ENST00000631247 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
UBE3A-223ENST00000631247 ADCY10Q96PN6 1610 aa17.89■□□□□ 0.45
UBE3A-223ENST00000631247 MAPKBP1O60336 1514 aa17.86■□□□□ 0.45
UBE3A-223ENST00000631247 IQGAP2Q13576 1575 aa17.85■□□□□ 0.45
UBE3A-223ENST00000631247 CARMIL2Q6F5E8 1435 aa17.83■□□□□ 0.45
UBE3A-223ENST00000631247 DIP2BQ9P265 1576 aa17.82■□□□□ 0.44
UBE3A-223ENST00000631247 ABCC10Q5T3U5 1492 aa17.82■□□□□ 0.44
UBE3A-223ENST00000631247 TTBK1Q5TCY1 1321 aaPredicted RBP17.81■□□□□ 0.44
UBE3A-223ENST00000631247 FAM69CQ0P6D2 419 aa17.8■□□□□ 0.44
UBE3A-223ENST00000631247 PTPRGP23470 1445 aa17.8■□□□□ 0.44
UBE3A-223ENST00000631247 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
UBE3A-223ENST00000631247 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.44
UBE3A-223ENST00000631247 TSPOAP1O95153 1857 aa17.72■□□□□ 0.43
UBE3A-223ENST00000631247 ABCC2Q92887 1545 aa17.72■□□□□ 0.43
UBE3A-223ENST00000631247 CTTNBP2Q8WZ74 1663 aa17.71■□□□□ 0.42
UBE3A-223ENST00000631247 DISP1Q96F81 1524 aa17.7■□□□□ 0.42
UBE3A-223ENST00000631247 UGGT2Q9NYU1 1516 aa17.69■□□□□ 0.42
UBE3A-223ENST00000631247 KDM6BO15054 1643 aa17.69■□□□□ 0.42
UBE3A-223ENST00000631247 KIAA0556O60303 1618 aa17.68■□□□□ 0.42
UBE3A-223ENST00000631247 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
UBE3A-223ENST00000631247 UHRF1BP1LA0JNW5 1464 aa17.66■□□□□ 0.42
UBE3A-223ENST00000631247 PLB1Q6P1J6 1458 aa17.65■□□□□ 0.42
UBE3A-223ENST00000631247 CACNB1Q02641 598 aaPredicted RBP17.65■□□□□ 0.42
UBE3A-223ENST00000631247 ASXL2Q76L83 1435 aa17.64■□□□□ 0.42
UBE3A-223ENST00000631247 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
UBE3A-223ENST00000631247 GOLGA3Q08378 1498 aa17.6■□□□□ 0.41
UBE3A-223ENST00000631247 GLI2P10070 1586 aa17.59■□□□□ 0.41
UBE3A-223ENST00000631247 KDM5BQ9UGL1 1544 aa17.58■□□□□ 0.41
UBE3A-223ENST00000631247 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
UBE3A-223ENST00000631247 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
UBE3A-223ENST00000631247 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
UBE3A-223ENST00000631247 PPRC1Q5VV67 1664 aaKnown RBP17.55■□□□□ 0.4
UBE3A-223ENST00000631247 EPRSP07814 1512 aaKnown RBP17.53■□□□□ 0.4
UBE3A-223ENST00000631247 MAP3K4Q9Y6R4 1608 aa17.52■□□□□ 0.4
UBE3A-223ENST00000631247 TEX14Q8IWB6 1497 aa17.5■□□□□ 0.39
UBE3A-223ENST00000631247 WDR7Q9Y4E6 1490 aa17.5■□□□□ 0.39
UBE3A-223ENST00000631247 ABCA8O94911 1581 aa17.49■□□□□ 0.39
UBE3A-223ENST00000631247 FAM9AQ8IZU1 332 aaPredicted RBP17.48■□□□□ 0.39
UBE3A-223ENST00000631247 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
UBE3A-223ENST00000631247 CFAP43Q8NDM7 1665 aa17.42■□□□□ 0.38
UBE3A-223ENST00000631247 EEA1Q15075 1411 aa17.42■□□□□ 0.38
UBE3A-223ENST00000631247 P3H3Q8IVL6 736 aa17.4■□□□□ 0.38
UBE3A-223ENST00000631247 SAMD9Q5K651 1589 aa17.4■□□□□ 0.38
UBE3A-223ENST00000631247 KCNH8Q96L42 1107 aa17.38■□□□□ 0.37
UBE3A-223ENST00000631247 CD109Q6YHK3 1445 aa17.38■□□□□ 0.37
UBE3A-223ENST00000631247 KDM4FA0A1W2PPD8 638 aa17.37■□□□□ 0.37
UBE3A-223ENST00000631247 ARID3CA6NKF2 412 aa17.36■□□□□ 0.37
UBE3A-223ENST00000631247 COL17A1Q9UMD9 1497 aaPredicted RBP17.36■□□□□ 0.37
UBE3A-223ENST00000631247 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
UBE3A-223ENST00000631247 MAGI3Q5TCQ9 1506 aa17.35■□□□□ 0.37
UBE3A-223ENST00000631247 RAPGEF6Q8TEU7 1601 aa17.35■□□□□ 0.37
UBE3A-223ENST00000631247 ADGRL1O94910 1474 aa17.33■□□□□ 0.37
UBE3A-223ENST00000631247 RANGAP1P46060 587 aaPredicted RBP17.32■□□□□ 0.36
UBE3A-223ENST00000631247 ATP10BO94823 1461 aa17.31■□□□□ 0.36
UBE3A-223ENST00000631247 KCNA4P22459 653 aa17.29■□□□□ 0.36
UBE3A-223ENST00000631247 KIF21BO75037 1637 aa17.29■□□□□ 0.36
UBE3A-223ENST00000631247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.28■□□□□ 0.36
UBE3A-223ENST00000631247 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
UBE3A-223ENST00000631247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.36
UBE3A-223ENST00000631247 ABCA9Q8IUA7 1624 aa17.27■□□□□ 0.36
UBE3A-223ENST00000631247 FHOD3Q2V2M9 1422 aa17.27■□□□□ 0.35
UBE3A-223ENST00000631247 EFCAB5A4FU69 1503 aa17.26■□□□□ 0.35
UBE3A-223ENST00000631247 NUP153P49790 1475 aaKnown RBP17.23■□□□□ 0.35
UBE3A-223ENST00000631247 ARAP3Q8WWN8 1544 aa17.21■□□□□ 0.34
UBE3A-223ENST00000631247 PHLDB1Q86UU1 1377 aa17.18■□□□□ 0.34
UBE3A-223ENST00000631247 NEO1Q92859 1461 aa17.17■□□□□ 0.34
UBE3A-223ENST00000631247 EHMT2Q96KQ7 1210 aa17.16■□□□□ 0.34
UBE3A-223ENST00000631247 PLEKHD1A6NEE1 506 aa17.14■□□□□ 0.33
UBE3A-223ENST00000631247 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
UBE3A-223ENST00000631247 CFAP74Q9C0B2 1584 aa17.14■□□□□ 0.33
UBE3A-223ENST00000631247 CDK13Q14004 1512 aaKnown RBP17.1■□□□□ 0.33
UBE3A-223ENST00000631247 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
UBE3A-223ENST00000631247 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
UBE3A-223ENST00000631247 RAPGEF3O95398 923 aa17.09■□□□□ 0.33
UBE3A-223ENST00000631247 FRMPD1Q5SYB0 1578 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms