RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 CREBZFQ9NS37 354 aa7.67□□□□□ -1.18
CHD2-220ENST00000630813 PAK3O75914 559 aaPredicted RBP7.65□□□□□ -1.18
CHD2-220ENST00000630813 RSF1Q96T23 1441 aaPredicted RBP7.64□□□□□ -1.19
CHD2-220ENST00000630813 PELP1Q8IZL8 1130 aaKnown RBP7.64□□□□□ -1.19
CHD2-220ENST00000630813 PHF12Q96QT6 1004 aa7.64□□□□□ -1.19
CHD2-220ENST00000630813 CECR2Q9BXF3 1484 aa7.62□□□□□ -1.19
CHD2-220ENST00000630813 RB1CC1Q8TDY2 1594 aa7.6□□□□□ -1.19
CHD2-220ENST00000630813 METRNQ9UJH8 293 aa7.6□□□□□ -1.19
CHD2-220ENST00000630813 STAG3Q9UJ98 1225 aa7.59□□□□□ -1.19
CHD2-220ENST00000630813 POTEJP0CG39 1038 aa7.57□□□□□ -1.2
CHD2-220ENST00000630813 MAMSTRQ6ZN01 415 aa7.57□□□□□ -1.2
CHD2-220ENST00000630813 MROH2BQ7Z745 1585 aa7.56□□□□□ -1.2
CHD2-220ENST00000630813 C7P10643 843 aa7.56□□□□□ -1.2
CHD2-220ENST00000630813 SLC39A7Q92504 469 aa7.56□□□□□ -1.2
CHD2-220ENST00000630813 FAM163AQ96GL9 167 aaPredicted RBP7.56□□□□□ -1.2
CHD2-220ENST00000630813 ASTLQ6HA08 431 aaPredicted RBP7.55□□□□□ -1.2
CHD2-220ENST00000630813 UNC13AQ9UPW8 1703 aa7.55□□□□□ -1.2
CHD2-220ENST00000630813 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
CHD2-220ENST00000630813 ATMINO43313 823 aaPredicted RBP7.53□□□□□ -1.2
CHD2-220ENST00000630813 NPM1P06748 294 aaKnown RBP eCLIP7.53□□□□□ -1.2
CHD2-220ENST00000630813 MS4A3Q96HJ5 214 aa7.52□□□□□ -1.21
CHD2-220ENST00000630813 SCUBE2Q9NQ36 999 aa7.52□□□□□ -1.21
CHD2-220ENST00000630813 BICRAQ9NZM4 1560 aa7.5□□□□□ -1.21
CHD2-220ENST00000630813 WIZO95785 1651 aa7.49□□□□□ -1.21
CHD2-220ENST00000630813 MNX1P50219 401 aaPredicted RBP7.46□□□□□ -1.22
CHD2-220ENST00000630813 BAZ1AQ9NRL2 1556 aaPredicted RBP7.43□□□□□ -1.22
CHD2-220ENST00000630813 ATN1P54259 1190 aaPredicted RBP7.43□□□□□ -1.22
CHD2-220ENST00000630813 SMARCA4P51532 1647 aa7.42□□□□□ -1.22
CHD2-220ENST00000630813 CDAN1Q8IWY9 1227 aa7.42□□□□□ -1.22
CHD2-220ENST00000630813 SPDYE4A6NLX3 237 aa7.41□□□□□ -1.22
CHD2-220ENST00000630813 TSPYL2Q9H2G4 693 aaPredicted RBP7.4□□□□□ -1.22
CHD2-220ENST00000630813 EIF4G1Q04637 1599 aaKnown RBP7.39□□□□□ -1.23
CHD2-220ENST00000630813 LOC105371045A0A1W2PR82 267 aa7.38□□□□□ -1.23
CHD2-220ENST00000630813 POTEFA5A3E0 1075 aa7.38□□□□□ -1.23
CHD2-220ENST00000630813 TOP2AP11388 1531 aaKnown RBP7.37□□□□□ -1.23
CHD2-220ENST00000630813 BMP2KQ9NSY1 1161 aaPredicted RBP7.36□□□□□ -1.23
CHD2-220ENST00000630813 CCDC61Q9Y6R9 512 aa7.36□□□□□ -1.23
CHD2-220ENST00000630813 CCDC88BA6NC98 1476 aa7.35□□□□□ -1.23
CHD2-220ENST00000630813 SMARCA2P51531 1590 aa7.34□□□□□ -1.23
CHD2-220ENST00000630813 KIF12Q96FN5 646 aa7.34□□□□□ -1.23
CHD2-220ENST00000630813 SEC24BO95487 1268 aa7.33□□□□□ -1.24
CHD2-220ENST00000630813 TRPC6Q9Y210 931 aa7.32□□□□□ -1.24
CHD2-220ENST00000630813 PEG3Q9GZU2 1588 aa7.32□□□□□ -1.24
CHD2-220ENST00000630813 COLQQ9Y215 455 aaPredicted RBP7.31□□□□□ -1.24
CHD2-220ENST00000630813 TIE1P35590 1138 aa7.3□□□□□ -1.24
CHD2-220ENST00000630813 TRIM41Q8WV44 630 aa7.3□□□□□ -1.24
CHD2-220ENST00000630813 ATAD2BQ9ULI0 1458 aa7.29□□□□□ -1.24
CHD2-220ENST00000630813 MAP3K13O43283 966 aa7.28□□□□□ -1.24
CHD2-220ENST00000630813 ST18O60284 1047 aa7.28□□□□□ -1.24
CHD2-220ENST00000630813 TTLL13PA6NNM8 815 aa7.27□□□□□ -1.25
CHD2-220ENST00000630813 MMRN1Q13201 1228 aa7.27□□□□□ -1.25
CHD2-220ENST00000630813 SLAIN1Q8ND83 568 aa7.27□□□□□ -1.25
CHD2-220ENST00000630813 ABCC8Q09428 1581 aa7.25□□□□□ -1.25
CHD2-220ENST00000630813 SPNS2Q8IVW8 549 aa7.24□□□□□ -1.25
CHD2-220ENST00000630813 FAM9AQ8IZU1 332 aaPredicted RBP7.24□□□□□ -1.25
CHD2-220ENST00000630813 IER5LQ5T953 404 aa7.23□□□□□ -1.25
CHD2-220ENST00000630813 TRIM35Q9UPQ4 493 aa7.23□□□□□ -1.25
CHD2-220ENST00000630813 CSRNP3Q8WYN3 585 aa7.21□□□□□ -1.26
CHD2-220ENST00000630813 BAZ1BQ9UIG0 1483 aaKnown RBP7.19□□□□□ -1.26
CHD2-220ENST00000630813 RASEFQ8IZ41 740 aa7.19□□□□□ -1.26
CHD2-220ENST00000630813 NCAPD3P42695 1498 aa7.17□□□□□ -1.26
CHD2-220ENST00000630813 RUSC2Q8N2Y8 1516 aa7.17□□□□□ -1.26
CHD2-220ENST00000630813 PLEKHG5O94827 1062 aa7.17□□□□□ -1.26
CHD2-220ENST00000630813 TMEM121BQ9BXQ6 578 aaPredicted RBP7.17□□□□□ -1.26
CHD2-220ENST00000630813 SOGA1O94964 1423 aa7.17□□□□□ -1.26
CHD2-220ENST00000630813 PLCG2P16885 1265 aa7.16□□□□□ -1.26
CHD2-220ENST00000630813 PCDHB13Q9Y5F0 798 aa7.16□□□□□ -1.26
CHD2-220ENST00000630813 EHMT2Q96KQ7 1210 aa7.15□□□□□ -1.26
CHD2-220ENST00000630813 SYNJ1O43426 1573 aa7.14□□□□□ -1.27
CHD2-220ENST00000630813 HMGXB3Q12766 1538 aa7.14□□□□□ -1.27
CHD2-220ENST00000630813 MARVELD3Q96A59 401 aa7.14□□□□□ -1.27
CHD2-220ENST00000630813 SGIP1Q9BQI5 828 aa7.14□□□□□ -1.27
CHD2-220ENST00000630813 PCGF6Q9BYE7 350 aa7.14□□□□□ -1.27
CHD2-220ENST00000630813 MIER1Q8N108 512 aa7.13□□□□□ -1.27
CHD2-220ENST00000630813 WRNQ14191 1432 aaPredicted RBP eCLIP7.12□□□□□ -1.27
CHD2-220ENST00000630813 SNPHO15079 494 aa7.12□□□□□ -1.27
CHD2-220ENST00000630813 PROM2Q8N271 834 aa7.11□□□□□ -1.27
CHD2-220ENST00000630813 TMEM106CQ9BVX2 250 aa7.11□□□□□ -1.27
CHD2-220ENST00000630813 IFNL1Q8IU54 200 aa7.1□□□□□ -1.27
CHD2-220ENST00000630813 IRX5P78411 483 aaPredicted RBP7.09□□□□□ -1.27
CHD2-220ENST00000630813 HRCP23327 699 aa7.08□□□□□ -1.28
CHD2-220ENST00000630813 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.07□□□□□ -1.28
CHD2-220ENST00000630813 CFTRP13569 1480 aa7.06□□□□□ -1.28
CHD2-220ENST00000630813 OCEL1Q9H607 264 aa7.06□□□□□ -1.28
CHD2-220ENST00000630813 CC2D2AQ9P2K1 1620 aa7.05□□□□□ -1.28
CHD2-220ENST00000630813 EEA1Q15075 1411 aa7.05□□□□□ -1.28
CHD2-220ENST00000630813 TRIM26Q12899 539 aaPredicted RBP7.05□□□□□ -1.28
CHD2-220ENST00000630813 CUX1P39880 1505 aa7.05□□□□□ -1.28
CHD2-220ENST00000630813 TOP2BQ02880 1626 aa7.05□□□□□ -1.28
CHD2-220ENST00000630813 EMP3P54852 163 aa7.04□□□□□ -1.28
CHD2-220ENST00000630813 TNIKQ9UKE5 1360 aa7.04□□□□□ -1.28
CHD2-220ENST00000630813 BIVM-ERCC5R4GMW8 1640 aa7.04□□□□□ -1.28
CHD2-220ENST00000630813 PLCD3Q8N3E9 789 aa7.02□□□□□ -1.29
CHD2-220ENST00000630813 CEP162Q5TB80 1403 aa7.01□□□□□ -1.29
CHD2-220ENST00000630813 NUBP1P53384 320 aa7.01□□□□□ -1.29
CHD2-220ENST00000630813 PPARGC1BQ86YN6 1023 aaKnown RBP7.01□□□□□ -1.29
CHD2-220ENST00000630813 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
CHD2-220ENST00000630813 KRTAP3-2Q9BYR7 98 aa7.01□□□□□ -1.29
CHD2-220ENST00000630813 CADPSQ9ULU8 1353 aa7□□□□□ -1.29
CHD2-220ENST00000630813 FAM212AQ96EL1 285 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms