RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 TTBK1Q5TCY1 1321 aaPredicted RBP13.64□□□□□ -0.23
SPTAN1-215ENST00000628867 KIF13AQ9H1H9 1805 aa13.64□□□□□ -0.23
SPTAN1-215ENST00000628867 SHROOM2Q13796 1616 aa13.63□□□□□ -0.23
SPTAN1-215ENST00000628867 ERICH3Q5RHP9 1530 aa13.6□□□□□ -0.23
SPTAN1-215ENST00000628867 KDM6BO15054 1643 aa13.6□□□□□ -0.23
SPTAN1-215ENST00000628867 MAPKBP1O60336 1514 aa13.56□□□□□ -0.24
SPTAN1-215ENST00000628867 DIP2BQ9P265 1576 aa13.53□□□□□ -0.24
SPTAN1-215ENST00000628867 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
SPTAN1-215ENST00000628867 PTPRGP23470 1445 aa13.52□□□□□ -0.25
SPTAN1-215ENST00000628867 TSPOAP1O95153 1857 aa13.52□□□□□ -0.25
SPTAN1-215ENST00000628867 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
SPTAN1-215ENST00000628867 ADCY10Q96PN6 1610 aa13.48□□□□□ -0.25
SPTAN1-215ENST00000628867 KIAA0586Q9BVV6 1533 aa13.48□□□□□ -0.25
SPTAN1-215ENST00000628867 CARMIL2Q6F5E8 1435 aa13.46□□□□□ -0.26
SPTAN1-215ENST00000628867 RUSC2Q8N2Y8 1516 aa13.45□□□□□ -0.26
SPTAN1-215ENST00000628867 ADGRL1O94910 1474 aa13.44□□□□□ -0.26
SPTAN1-215ENST00000628867 PLB1Q6P1J6 1458 aa13.43□□□□□ -0.26
SPTAN1-215ENST00000628867 TNIKQ9UKE5 1360 aa13.43□□□□□ -0.26
SPTAN1-215ENST00000628867 IGF1RP08069 1367 aa13.42□□□□□ -0.26
SPTAN1-215ENST00000628867 ASXL2Q76L83 1435 aa13.41□□□□□ -0.26
SPTAN1-215ENST00000628867 KIF27Q86VH2 1401 aa13.4□□□□□ -0.26
SPTAN1-215ENST00000628867 ABCC2Q92887 1545 aa13.39□□□□□ -0.27
SPTAN1-215ENST00000628867 TEX14Q8IWB6 1497 aa13.36□□□□□ -0.27
SPTAN1-215ENST00000628867 CARMIL1Q5VZK9 1371 aa13.36□□□□□ -0.27
SPTAN1-215ENST00000628867 UACAQ9BZF9 1416 aa13.35□□□□□ -0.27
SPTAN1-215ENST00000628867 HECW2Q9P2P5 1572 aa13.34□□□□□ -0.27
SPTAN1-215ENST00000628867 FBXO41Q8TF61 875 aa13.34□□□□□ -0.27
SPTAN1-215ENST00000628867 GLI2P10070 1586 aa13.33□□□□□ -0.28
SPTAN1-215ENST00000628867 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
SPTAN1-215ENST00000628867 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
SPTAN1-215ENST00000628867 CUL7Q14999 1698 aa13.31□□□□□ -0.28
SPTAN1-215ENST00000628867 COL17A1Q9UMD9 1497 aaPredicted RBP13.3□□□□□ -0.28
SPTAN1-215ENST00000628867 UHRF1BP1LA0JNW5 1464 aa13.29□□□□□ -0.28
SPTAN1-215ENST00000628867 EPRSP07814 1512 aaKnown RBP13.29□□□□□ -0.28
SPTAN1-215ENST00000628867 PPRC1Q5VV67 1664 aaKnown RBP13.24□□□□□ -0.29
SPTAN1-215ENST00000628867 IQGAP2Q13576 1575 aa13.24□□□□□ -0.29
SPTAN1-215ENST00000628867 CD109Q6YHK3 1445 aa13.24□□□□□ -0.29
SPTAN1-215ENST00000628867 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
SPTAN1-215ENST00000628867 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.29
SPTAN1-215ENST00000628867 ARID4BQ4LE39 1312 aaPredicted RBP13.21□□□□□ -0.29
SPTAN1-215ENST00000628867 WDR7Q9Y4E6 1490 aa13.2□□□□□ -0.3
SPTAN1-215ENST00000628867 DISP1Q96F81 1524 aa13.19□□□□□ -0.3
SPTAN1-215ENST00000628867 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
SPTAN1-215ENST00000628867 RAPGEF2Q9Y4G8 1499 aa13.16□□□□□ -0.3
SPTAN1-215ENST00000628867 ARID3CA6NKF2 412 aa13.15□□□□□ -0.3
SPTAN1-215ENST00000628867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
SPTAN1-215ENST00000628867 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
SPTAN1-215ENST00000628867 MAGI3Q5TCQ9 1506 aa13.14□□□□□ -0.31
SPTAN1-215ENST00000628867 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
SPTAN1-215ENST00000628867 UGGT2Q9NYU1 1516 aa13.13□□□□□ -0.31
SPTAN1-215ENST00000628867 GOLGA3Q08378 1498 aa13.11□□□□□ -0.31
SPTAN1-215ENST00000628867 RAPGEF3O95398 923 aa13.1□□□□□ -0.31
SPTAN1-215ENST00000628867 PTPRMP28827 1452 aa13.1□□□□□ -0.31
SPTAN1-215ENST00000628867 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
SPTAN1-215ENST00000628867 PHLDB1Q86UU1 1377 aa13.09□□□□□ -0.31
SPTAN1-215ENST00000628867 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.31
SPTAN1-215ENST00000628867 P3H3Q8IVL6 736 aa13.08□□□□□ -0.32
SPTAN1-215ENST00000628867 KIF21BO75037 1637 aa13.07□□□□□ -0.32
SPTAN1-215ENST00000628867 LMTK3Q96Q04 1460 aa13.07□□□□□ -0.32
SPTAN1-215ENST00000628867 ARAP3Q8WWN8 1544 aa13.06□□□□□ -0.32
SPTAN1-215ENST00000628867 HSPA2P54652 639 aa13.04□□□□□ -0.32
SPTAN1-215ENST00000628867 CERKQ8TCT0 537 aa13.04□□□□□ -0.32
SPTAN1-215ENST00000628867 ABCA8O94911 1581 aa13□□□□□ -0.33
SPTAN1-215ENST00000628867 DISP3Q9P2K9 1392 aa13□□□□□ -0.33
SPTAN1-215ENST00000628867 MLECQ14165 292 aa13□□□□□ -0.33
SPTAN1-215ENST00000628867 PCF11O94913 1555 aaKnown RBP12.99□□□□□ -0.33
SPTAN1-215ENST00000628867 POGZQ7Z3K3 1410 aa12.99□□□□□ -0.33
SPTAN1-215ENST00000628867 PLEKHD1A6NEE1 506 aa12.98□□□□□ -0.33
SPTAN1-215ENST00000628867 ATP10BO94823 1461 aa12.97□□□□□ -0.33
SPTAN1-215ENST00000628867 ADAMTSL3P82987 1691 aa12.97□□□□□ -0.33
SPTAN1-215ENST00000628867 RANGAP1P46060 587 aaPredicted RBP12.97□□□□□ -0.33
SPTAN1-215ENST00000628867 NEO1Q92859 1461 aa12.97□□□□□ -0.33
SPTAN1-215ENST00000628867 SOCS7O14512 581 aa12.95□□□□□ -0.34
SPTAN1-215ENST00000628867 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
SPTAN1-215ENST00000628867 CTTNBP2Q8WZ74 1663 aa12.93□□□□□ -0.34
SPTAN1-215ENST00000628867 DENND4BO75064 1496 aaPredicted RBP12.92□□□□□ -0.34
SPTAN1-215ENST00000628867 MADDQ8WXG6 1647 aa12.92□□□□□ -0.34
SPTAN1-215ENST00000628867 BCORL1Q5H9F3 1711 aa12.92□□□□□ -0.34
SPTAN1-215ENST00000628867 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
SPTAN1-215ENST00000628867 AKNAQ7Z591 1439 aa12.91□□□□□ -0.34
SPTAN1-215ENST00000628867 ABCA9Q8IUA7 1624 aa12.91□□□□□ -0.34
SPTAN1-215ENST00000628867 ILDR2Q71H61 639 aa12.9□□□□□ -0.34
SPTAN1-215ENST00000628867 FANCAO15360 1455 aa12.9□□□□□ -0.34
SPTAN1-215ENST00000628867 RIMS1Q86UR5 1692 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-215ENST00000628867 ESF1Q9H501 851 aaKnown RBP12.87□□□□□ -0.35
SPTAN1-215ENST00000628867 ATP1B4Q9UN42 357 aaPredicted RBP12.85□□□□□ -0.35
SPTAN1-215ENST00000628867 PRXQ9BXM0 1461 aa12.85□□□□□ -0.35
SPTAN1-215ENST00000628867 CEBPAP49715 358 aaPredicted RBP12.84□□□□□ -0.35
SPTAN1-215ENST00000628867 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
SPTAN1-215ENST00000628867 FHOD3Q2V2M9 1422 aa12.83□□□□□ -0.36
SPTAN1-215ENST00000628867 YEATS2Q9ULM3 1422 aa12.82□□□□□ -0.36
SPTAN1-215ENST00000628867 RAPGEF6Q8TEU7 1601 aa12.82□□□□□ -0.36
SPTAN1-215ENST00000628867 ARHGEF40Q8TER5 1519 aa12.82□□□□□ -0.36
SPTAN1-215ENST00000628867 ZFYVE16Q7Z3T8 1539 aa12.81□□□□□ -0.36
SPTAN1-215ENST00000628867 MAGI2Q86UL8 1455 aa12.8□□□□□ -0.36
SPTAN1-215ENST00000628867 EFCAB5A4FU69 1503 aa12.8□□□□□ -0.36
SPTAN1-215ENST00000628867 EFCAB2Q5VUJ9 269 aa12.8□□□□□ -0.36
SPTAN1-215ENST00000628867 FRMPD1Q5SYB0 1578 aa12.8□□□□□ -0.36
SPTAN1-215ENST00000628867 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
SPTAN1-215ENST00000628867 CFAP74Q9C0B2 1584 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms