RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 HOMEZQ8IX15 550 aa2.61□□□□□ -1.99
TCF4-264ENST00000628391 TIMELESSQ9UNS1 1208 aa2.61□□□□□ -1.99
TCF4-264ENST00000628391 NCAPD3P42695 1498 aa2.6□□□□□ -1.99
TCF4-264ENST00000628391 PPM1GO15355 546 aaPredicted RBP2.6□□□□□ -1.99
TCF4-264ENST00000628391 IPO9Q96P70 1041 aaKnown RBP2.6□□□□□ -1.99
TCF4-264ENST00000628391 SMARCA2P51531 1590 aa2.59□□□□□ -1.99
TCF4-264ENST00000628391 PAK3O75914 559 aaPredicted RBP2.59□□□□□ -1.99
TCF4-264ENST00000628391 HSP90AA1P07900 732 aaKnown RBP2.59□□□□□ -1.99
TCF4-264ENST00000628391 ITGAEP38570 1179 aa2.59□□□□□ -1.99
TCF4-264ENST00000628391 IPO4Q8TEX9 1081 aaKnown RBP2.59□□□□□ -1.99
TCF4-264ENST00000628391 NAP1L5Q96NT1 182 aaPredicted RBP2.59□□□□□ -1.99
TCF4-264ENST00000628391 ZBTB47Q9UFB7 747 aaPredicted RBP2.59□□□□□ -1.99
TCF4-264ENST00000628391 BRPF3Q9ULD4 1205 aa2.59□□□□□ -1.99
TCF4-264ENST00000628391 RB1CC1Q8TDY2 1594 aa2.58□□□□□ -2
TCF4-264ENST00000628391 CCER2I3L3R5 266 aa2.58□□□□□ -2
TCF4-264ENST00000628391 GSE1Q14687 1217 aa2.58□□□□□ -2
TCF4-264ENST00000628391 PPP4R2Q9NY27 417 aa2.58□□□□□ -2
TCF4-264ENST00000628391 NAP1L2Q9ULW6 460 aaPredicted RBP2.58□□□□□ -2
TCF4-264ENST00000628391 CEP162Q5TB80 1403 aa2.58□□□□□ -2
TCF4-264ENST00000628391 EIF4G1Q04637 1599 aaKnown RBP2.57□□□□□ -2
TCF4-264ENST00000628391 NCLP19338 710 aaKnown RBP2.57□□□□□ -2
TCF4-264ENST00000628391 CANXP27824 592 aaKnown RBP2.57□□□□□ -2
TCF4-264ENST00000628391 CNGB1Q14028 1251 aaPredicted RBP2.57□□□□□ -2
TCF4-264ENST00000628391 PAXIP1Q6ZW49 1069 aaPredicted RBP2.57□□□□□ -2
TCF4-264ENST00000628391 PRDM4Q9UKN5 801 aa2.57□□□□□ -2
TCF4-264ENST00000628391 ARID4BQ4LE39 1312 aaPredicted RBP2.57□□□□□ -2
TCF4-264ENST00000628391 CUX2O14529 1486 aa2.57□□□□□ -2
TCF4-264ENST00000628391 TPM2P07951 284 aa2.56□□□□□ -2
TCF4-264ENST00000628391 GTF2E1P29083 439 aaPredicted RBP2.56□□□□□ -2
TCF4-264ENST00000628391 AEBP2Q6ZN18 517 aaPredicted RBP2.56□□□□□ -2
TCF4-264ENST00000628391 TEX2Q8IWB9 1127 aa2.56□□□□□ -2
TCF4-264ENST00000628391 SMAP1Q8IYB5 467 aaPredicted RBP2.56□□□□□ -2
TCF4-264ENST00000628391 DHX57Q6P158 1386 aaKnown RBP2.56□□□□□ -2
TCF4-264ENST00000628391 TULP1O00294 542 aaPredicted RBP2.55□□□□□ -2
TCF4-264ENST00000628391 VGFO15240 615 aaPredicted RBP2.55□□□□□ -2
TCF4-264ENST00000628391 CLCN1P35523 988 aa2.55□□□□□ -2
TCF4-264ENST00000628391 VIRMAQ69YN4 1812 aaKnown RBP2.55□□□□□ -2
TCF4-264ENST00000628391 NPM2Q86SE8 214 aaKnown RBP2.55□□□□□ -2
TCF4-264ENST00000628391 BBXQ8WY36 941 aaPredicted RBP2.55□□□□□ -2
TCF4-264ENST00000628391 EHMT2Q96KQ7 1210 aa2.55□□□□□ -2
TCF4-264ENST00000628391 MAP7D2Q96T17 732 aa2.55□□□□□ -2
TCF4-264ENST00000628391 PDCL3Q9H2J4 239 aa2.55□□□□□ -2
TCF4-264ENST00000628391 PNNQ9H307 717 aaKnown RBP2.55□□□□□ -2
TCF4-264ENST00000628391 FBXO3Q9UK99 471 aa2.55□□□□□ -2
TCF4-264ENST00000628391 TNIKQ9UKE5 1360 aa2.54□□□□□ -2
TCF4-264ENST00000628391 CHRM1P11229 460 aaPredicted RBP2.54□□□□□ -2
TCF4-264ENST00000628391 L1TD1Q5T7N2 865 aaKnown RBP2.54□□□□□ -2
TCF4-264ENST00000628391 UTP14CQ5TAP6 766 aaKnown RBP2.54□□□□□ -2
TCF4-264ENST00000628391 CNKSR2Q8WXI2 1034 aa2.54□□□□□ -2
TCF4-264ENST00000628391 FRAT1Q92837 279 aaPredicted RBP2.54□□□□□ -2
TCF4-264ENST00000628391 DDRGK1Q96HY6 314 aa2.54□□□□□ -2
TCF4-264ENST00000628391 STAC3Q96MF2 364 aa2.54□□□□□ -2
TCF4-264ENST00000628391 CHMP4AQ9BY43 222 aa2.54□□□□□ -2
TCF4-264ENST00000628391 CHMP4BQ9H444 224 aaKnown RBP2.54□□□□□ -2
TCF4-264ENST00000628391 BCCIPQ9P287 314 aaKnown RBP eCLIP2.54□□□□□ -2
TCF4-264ENST00000628391 HSP90B1P14625 803 aaKnown RBP2.53□□□□□ -2
TCF4-264ENST00000628391 RGS3P49796 1198 aa2.53□□□□□ -2
TCF4-264ENST00000628391 SAMD1Q6SPF0 538 aaPredicted RBP2.53□□□□□ -2
TCF4-264ENST00000628391 MTERF4Q7Z6M4 381 aaKnown RBP2.53□□□□□ -2
TCF4-264ENST00000628391 FTSJ3Q8IY81 847 aaKnown RBP2.53□□□□□ -2
TCF4-264ENST00000628391 ANP32BQ92688 251 aaKnown RBP2.53□□□□□ -2
TCF4-264ENST00000628391 RRAGDQ9NQL2 400 aaPredicted RBP2.53□□□□□ -2
TCF4-264ENST00000628391 LAS1LQ9Y4W2 734 aaKnown RBP2.53□□□□□ -2
TCF4-264ENST00000628391 KIF21BO75037 1637 aa2.53□□□□□ -2
TCF4-264ENST00000628391 MAPKBP1O60336 1514 aa2.52□□□□□ -2.01
TCF4-264ENST00000628391 GOLGA3Q08378 1498 aa2.52□□□□□ -2.01
TCF4-264ENST00000628391 CEP164Q9UPV0 1460 aa2.52□□□□□ -2.01
TCF4-264ENST00000628391 POLR1AO95602 1720 aaPredicted RBP2.52□□□□□ -2.01
TCF4-264ENST00000628391 ANP32CO43423 234 aa2.52□□□□□ -2.01
TCF4-264ENST00000628391 DCAF8L2P0C7V8 631 aa2.52□□□□□ -2.01
TCF4-264ENST00000628391 NFKBIBQ15653 356 aa2.52□□□□□ -2.01
TCF4-264ENST00000628391 TAF3Q5VWG9 929 aa2.52□□□□□ -2.01
TCF4-264ENST00000628391 PLPPR3Q6T4P5 718 aa2.52□□□□□ -2.01
TCF4-264ENST00000628391 DHX37Q8IY37 1157 aaKnown RBP2.52□□□□□ -2.01
TCF4-264ENST00000628391 ZFP91Q96JP5 570 aaPredicted RBP2.52□□□□□ -2.01
TCF4-264ENST00000628391 KCNH8Q96L42 1107 aa2.52□□□□□ -2.01
TCF4-264ENST00000628391 VPS8Q8N3P4 1428 aa2.51□□□□□ -2.01
TCF4-264ENST00000628391 WDR97A6NE52 1622 aa2.51□□□□□ -2.01
TCF4-264ENST00000628391 ABCA5Q8WWZ7 1642 aa2.51□□□□□ -2.01
TCF4-264ENST00000628391 HAP1P54257 671 aaPredicted RBP2.51□□□□□ -2.01
TCF4-264ENST00000628391 TERF1P54274 439 aa2.51□□□□□ -2.01
TCF4-264ENST00000628391 DMTNQ08495 405 aa2.51□□□□□ -2.01
TCF4-264ENST00000628391 TRIM52Q96A61 297 aa2.51□□□□□ -2.01
TCF4-264ENST00000628391 RNF216Q9NWF9 866 aaPredicted RBP2.51□□□□□ -2.01
TCF4-264ENST00000628391 PRDM2Q13029 1718 aa2.51□□□□□ -2.01
TCF4-264ENST00000628391 SMG6Q86US8 1419 aaKnown RBP2.51□□□□□ -2.01
TCF4-264ENST00000628391 RSF1Q96T23 1441 aaPredicted RBP2.51□□□□□ -2.01
TCF4-264ENST00000628391 ZBED9Q6R2W3 1325 aa2.5□□□□□ -2.01
TCF4-264ENST00000628391 TCERG1O14776 1098 aaKnown RBP2.5□□□□□ -2.01
TCF4-264ENST00000628391 PPP1R15AO75807 674 aaPredicted RBP2.5□□□□□ -2.01
TCF4-264ENST00000628391 KIF20AO95235 890 aa2.5□□□□□ -2.01
TCF4-264ENST00000628391 MS4A1P11836 297 aa2.5□□□□□ -2.01
TCF4-264ENST00000628391 CDK11BP21127 795 aaKnown RBP2.5□□□□□ -2.01
TCF4-264ENST00000628391 TNNT2P45379 298 aaPredicted RBP2.5□□□□□ -2.01
TCF4-264ENST00000628391 B4GALNT3Q6L9W6 998 aa2.5□□□□□ -2.01
TCF4-264ENST00000628391 C14orf37Q86TY3 774 aa2.5□□□□□ -2.01
TCF4-264ENST00000628391 DCAF11Q8TEB1 546 aa2.5□□□□□ -2.01
TCF4-264ENST00000628391 ERICH3Q5RHP9 1530 aa2.5□□□□□ -2.01
TCF4-264ENST00000628391 CCDC88BA6NC98 1476 aa2.5□□□□□ -2.01
TCF4-264ENST00000628391 NCOA2Q15596 1464 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms