RNA–Protein interactions for RNA: ENST00000627212.2

RAPGEF6-215, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-215ENST00000627212 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF6-215ENST00000627212 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
RAPGEF6-215ENST00000627212 RGL3Q3MIN7 710 aa13.3□□□□□ -0.28
RAPGEF6-215ENST00000627212 TSPY4P0CV99 314 aa13.27□□□□□ -0.28
RAPGEF6-215ENST00000627212 TSPY10P0CW01 314 aa13.27□□□□□ -0.28
RAPGEF6-215ENST00000627212 B4GALNT3Q6L9W6 998 aa13.27□□□□□ -0.28
RAPGEF6-215ENST00000627212 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.28
RAPGEF6-215ENST00000627212 LAS1LQ9Y4W2 734 aaKnown RBP13.27□□□□□ -0.28
RAPGEF6-215ENST00000627212 RSF1Q96T23 1441 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF6-215ENST00000627212 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
RAPGEF6-215ENST00000627212 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
RAPGEF6-215ENST00000627212 RGS3P49796 1198 aa13.19□□□□□ -0.3
RAPGEF6-215ENST00000627212 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
RAPGEF6-215ENST00000627212 GLIPR1L2Q4G1C9 344 aa13.16□□□□□ -0.3
RAPGEF6-215ENST00000627212 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
RAPGEF6-215ENST00000627212 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
RAPGEF6-215ENST00000627212 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
RAPGEF6-215ENST00000627212 RBM19Q9Y4C8 960 aaKnown RBP13.15□□□□□ -0.31
RAPGEF6-215ENST00000627212 GOLGA3Q08378 1498 aa13.14□□□□□ -0.31
RAPGEF6-215ENST00000627212 CARD11Q9BXL7 1154 aa13.13□□□□□ -0.31
RAPGEF6-215ENST00000627212 CCDC180Q9P1Z9 1646 aa13.13□□□□□ -0.31
RAPGEF6-215ENST00000627212 NOP58Q9Y2X3 529 aaKnown RBP13.12□□□□□ -0.31
RAPGEF6-215ENST00000627212 TNIKQ9UKE5 1360 aa13.12□□□□□ -0.31
RAPGEF6-215ENST00000627212 TNNT2P45379 298 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF6-215ENST00000627212 NCLP19338 710 aaKnown RBP13.1□□□□□ -0.31
RAPGEF6-215ENST00000627212 CHMP7Q8WUX9 453 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF6-215ENST00000627212 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF6-215ENST00000627212 DDRGK1Q96HY6 314 aa13.1□□□□□ -0.31
RAPGEF6-215ENST00000627212 BECN1Q14457 450 aa13.09□□□□□ -0.31
RAPGEF6-215ENST00000627212 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF6-215ENST00000627212 CC2D1BQ5T0F9 858 aaKnown RBP13.09□□□□□ -0.31
RAPGEF6-215ENST00000627212 WRNQ14191 1432 aaPredicted RBP eCLIP13.08□□□□□ -0.31
RAPGEF6-215ENST00000627212 TRIM44Q96DX7 344 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF6-215ENST00000627212 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
RAPGEF6-215ENST00000627212 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
RAPGEF6-215ENST00000627212 MYH16Q9H6N6 1097 aa13.06□□□□□ -0.32
RAPGEF6-215ENST00000627212 CFDP1Q9UEE9 299 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF6-215ENST00000627212 DEKP35659 375 aaKnown RBP13.05□□□□□ -0.32
RAPGEF6-215ENST00000627212 SOGA1O94964 1423 aa13.05□□□□□ -0.32
RAPGEF6-215ENST00000627212 ZBTB7CA1YPR0 619 aa13.05□□□□□ -0.32
RAPGEF6-215ENST00000627212 KANK4Q5T7N3 995 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF6-215ENST00000627212 FOXD1Q16676 465 aa13.04□□□□□ -0.32
RAPGEF6-215ENST00000627212 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
RAPGEF6-215ENST00000627212 EEA1Q15075 1411 aa13.03□□□□□ -0.32
RAPGEF6-215ENST00000627212 PLEKHD1A6NEE1 506 aa13.03□□□□□ -0.32
RAPGEF6-215ENST00000627212 FTSJ3Q8IY81 847 aaKnown RBP13.01□□□□□ -0.33
RAPGEF6-215ENST00000627212 SPRYD3Q8NCJ5 442 aa13.01□□□□□ -0.33
RAPGEF6-215ENST00000627212 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
RAPGEF6-215ENST00000627212 NAP1L5Q96NT1 182 aaPredicted RBP13□□□□□ -0.33
RAPGEF6-215ENST00000627212 C14orf37Q86TY3 774 aa13□□□□□ -0.33
RAPGEF6-215ENST00000627212 A0A0G2JS52 829 aa12.99□□□□□ -0.33
RAPGEF6-215ENST00000627212 HSPA5P11021 654 aaKnown RBP12.98□□□□□ -0.33
RAPGEF6-215ENST00000627212 DCAF11Q8TEB1 546 aa12.98□□□□□ -0.33
RAPGEF6-215ENST00000627212 ERICH6BQ5W0A0 696 aa12.97□□□□□ -0.33
RAPGEF6-215ENST00000627212 CEP164Q9UPV0 1460 aa12.97□□□□□ -0.33
RAPGEF6-215ENST00000627212 GOLGA6L22H0YM25 854 aa12.97□□□□□ -0.33
RAPGEF6-215ENST00000627212 ARID4BQ4LE39 1312 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF6-215ENST00000627212 PTMAP06454 111 aaKnown RBP12.96□□□□□ -0.33
RAPGEF6-215ENST00000627212 CECR2Q9BXF3 1484 aa12.95□□□□□ -0.34
RAPGEF6-215ENST00000627212 PLCB2Q00722 1185 aa12.95□□□□□ -0.34
RAPGEF6-215ENST00000627212 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
RAPGEF6-215ENST00000627212 DNTTIP2Q5QJE6 756 aaKnown RBP12.95□□□□□ -0.34
RAPGEF6-215ENST00000627212 TAOK2Q9UL54 1235 aa12.94□□□□□ -0.34
RAPGEF6-215ENST00000627212 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
RAPGEF6-215ENST00000627212 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
RAPGEF6-215ENST00000627212 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF6-215ENST00000627212 CCER2I3L3R5 266 aa12.92□□□□□ -0.34
RAPGEF6-215ENST00000627212 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF6-215ENST00000627212 CDCA8Q53HL2 280 aa12.89□□□□□ -0.35
RAPGEF6-215ENST00000627212 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
RAPGEF6-215ENST00000627212 SLKQ9H2G2 1235 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF6-215ENST00000627212 SAFB2Q14151 953 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAPGEF6-215ENST00000627212 HSP90AB1P08238 724 aaKnown RBP12.87□□□□□ -0.35
RAPGEF6-215ENST00000627212 GZF1Q9H116 711 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF6-215ENST00000627212 SOX12O15370 315 aa12.87□□□□□ -0.35
RAPGEF6-215ENST00000627212 RAB3GAP2Q9H2M9 1393 aa12.86□□□□□ -0.35
RAPGEF6-215ENST00000627212 SETD5Q9C0A6 1442 aa12.85□□□□□ -0.35
RAPGEF6-215ENST00000627212 PKD2Q13563 968 aa12.84□□□□□ -0.35
RAPGEF6-215ENST00000627212 APBB1O00213 710 aa12.84□□□□□ -0.35
RAPGEF6-215ENST00000627212 RCAN3Q9UKA8 241 aa12.84□□□□□ -0.35
RAPGEF6-215ENST00000627212 POGKQ9P215 609 aa12.83□□□□□ -0.36
RAPGEF6-215ENST00000627212 NUDCQ9Y266 331 aa12.83□□□□□ -0.36
RAPGEF6-215ENST00000627212 TMF1P82094 1093 aa12.83□□□□□ -0.36
RAPGEF6-215ENST00000627212 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
RAPGEF6-215ENST00000627212 CCDC88BA6NC98 1476 aa12.83□□□□□ -0.36
RAPGEF6-215ENST00000627212 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
RAPGEF6-215ENST00000627212 BAZ1BQ9UIG0 1483 aaKnown RBP12.82□□□□□ -0.36
RAPGEF6-215ENST00000627212 ARID3AQ99856 593 aa12.82□□□□□ -0.36
RAPGEF6-215ENST00000627212 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
RAPGEF6-215ENST00000627212 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
RAPGEF6-215ENST00000627212 LMOD2Q6P5Q4 547 aa12.8□□□□□ -0.36
RAPGEF6-215ENST00000627212 CASC1Q6TDU7 716 aa12.8□□□□□ -0.36
RAPGEF6-215ENST00000627212 RB1CC1Q8TDY2 1594 aa12.8□□□□□ -0.36
RAPGEF6-215ENST00000627212 L3MBTL2Q969R5 705 aa12.8□□□□□ -0.36
RAPGEF6-215ENST00000627212 HSCBQ8IWL3 235 aa12.79□□□□□ -0.36
RAPGEF6-215ENST00000627212 CLUAP1Q96AJ1 413 aa12.78□□□□□ -0.36
RAPGEF6-215ENST00000627212 MPHOSPH9Q99550 1183 aa12.78□□□□□ -0.36
RAPGEF6-215ENST00000627212 SLC4A3P48751 1232 aa12.78□□□□□ -0.36
RAPGEF6-215ENST00000627212 ZRSR1Q15695 479 aaKnown RBP12.77□□□□□ -0.36
RAPGEF6-215ENST00000627212 MORC1Q86VD1 984 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms