RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 CLSPNQ9HAW4 1339 aa10.83□□□□□ -0.68
CTNNA1-244ENST00000627109 AQRO60306 1485 aaKnown RBP eCLIP10.82□□□□□ -0.689e-7■■■■□ 24.9
CTNNA1-244ENST00000627109 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-244ENST00000627109 KIF21AQ7Z4S6 1674 aa10.8□□□□□ -0.68
CTNNA1-244ENST00000627109 SAMD9Q5K651 1589 aa10.8□□□□□ -0.68
CTNNA1-244ENST00000627109 CARMIL1Q5VZK9 1371 aa10.8□□□□□ -0.68
CTNNA1-244ENST00000627109 PCF11O94913 1555 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-244ENST00000627109 URB2Q14146 1524 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-244ENST00000627109 MRC2Q9UBG0 1479 aa10.78□□□□□ -0.68
CTNNA1-244ENST00000627109 TARBP1Q13395 1621 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-244ENST00000627109 FYCO1Q9BQS8 1478 aa10.76□□□□□ -0.69
CTNNA1-244ENST00000627109 LRRC9Q6ZRR7 1453 aa10.76□□□□□ -0.69
CTNNA1-244ENST00000627109 LRRIQ1Q96JM4 1722 aa10.76□□□□□ -0.69
CTNNA1-244ENST00000627109 RAD54L2Q9Y4B4 1467 aa10.75□□□□□ -0.69
CTNNA1-244ENST00000627109 THOC2Q8NI27 1593 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-244ENST00000627109 DHX57Q6P158 1386 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-244ENST00000627109 CHMP7Q8WUX9 453 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-244ENST00000627109 FHAD1B1AJZ9 1412 aa10.75□□□□□ -0.69
CTNNA1-244ENST00000627109 KANK4Q5T7N3 995 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-244ENST00000627109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.73□□□□□ -0.69
CTNNA1-244ENST00000627109 SNAPC4Q5SXM2 1469 aa10.72□□□□□ -0.69
CTNNA1-244ENST00000627109 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-244ENST00000627109 CCNB3Q8WWL7 1395 aa10.72□□□□□ -0.69
CTNNA1-244ENST00000627109 PBRM1Q86U86 1689 aa10.72□□□□□ -0.69
CTNNA1-244ENST00000627109 CASKIN1Q8WXD9 1431 aa10.72□□□□□ -0.69
CTNNA1-244ENST00000627109 APLP2Q06481 763 aa10.71□□□□□ -0.69
CTNNA1-244ENST00000627109 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-244ENST00000627109 MAPKBP1O60336 1514 aa10.68□□□□□ -0.7
CTNNA1-244ENST00000627109 DIEXFQ68CQ4 756 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-244ENST00000627109 ARHGEF11O15085 1522 aa10.66□□□□□ -0.7
CTNNA1-244ENST00000627109 HNRNPUL2Q1KMD3 747 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-244ENST00000627109 GRIN2BQ13224 1484 aa10.66□□□□□ -0.7
CTNNA1-244ENST00000627109 ZNF608Q9ULD9 1512 aaPredicted RBP10.65□□□□□ -0.71
CTNNA1-244ENST00000627109 ADAMTS12P58397 1594 aa10.64□□□□□ -0.71
CTNNA1-244ENST00000627109 GAPVD1Q14C86 1478 aa10.64□□□□□ -0.71
CTNNA1-244ENST00000627109 SCAF1Q9H7N4 1312 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-244ENST00000627109 PHLDB1Q86UU1 1377 aa10.64□□□□□ -0.71
CTNNA1-244ENST00000627109 FMN1Q68DA7 1419 aa10.63□□□□□ -0.71
CTNNA1-244ENST00000627109 IFT140Q96RY7 1462 aa10.61□□□□□ -0.71
CTNNA1-244ENST00000627109 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-244ENST00000627109 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
CTNNA1-244ENST00000627109 FHOD3Q2V2M9 1422 aa10.6□□□□□ -0.71
CTNNA1-244ENST00000627109 WDR62O43379 1518 aa10.6□□□□□ -0.71
CTNNA1-244ENST00000627109 ACIN1Q9UKV3 1341 aaKnown RBP10.6□□□□□ -0.71
CTNNA1-244ENST00000627109 P3H3Q8IVL6 736 aa10.6□□□□□ -0.71
CTNNA1-244ENST00000627109 SUPT6HQ7KZ85 1726 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-244ENST00000627109 EHBP1L1Q8N3D4 1523 aa10.59□□□□□ -0.71
CTNNA1-244ENST00000627109 SETD5Q9C0A6 1442 aa10.58□□□□□ -0.72
CTNNA1-244ENST00000627109 ERICH6Q7L0X2 663 aa10.58□□□□□ -0.72
CTNNA1-244ENST00000627109 RAB3GAP2Q9H2M9 1393 aa10.58□□□□□ -0.72
CTNNA1-244ENST00000627109 UGGT2Q9NYU1 1516 aa10.58□□□□□ -0.72
CTNNA1-244ENST00000627109 GCC2Q8IWJ2 1684 aa10.57□□□□□ -0.72
CTNNA1-244ENST00000627109 IQGAP2Q13576 1575 aa10.56□□□□□ -0.72
CTNNA1-244ENST00000627109 YTHDC1Q96MU7 727 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-244ENST00000627109 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
CTNNA1-244ENST00000627109 TCOF1Q13428 1488 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-244ENST00000627109 CCDC18Q5T9S5 1454 aa10.56□□□□□ -0.72
CTNNA1-244ENST00000627109 MYT1Q01538 1121 aa10.56□□□□□ -0.72
CTNNA1-244ENST00000627109 FGD6Q6ZV73 1430 aa10.55□□□□□ -0.72
CTNNA1-244ENST00000627109 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
CTNNA1-244ENST00000627109 PHF23Q9BUL5 403 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-244ENST00000627109 MAGI3Q5TCQ9 1506 aa10.54□□□□□ -0.72
CTNNA1-244ENST00000627109 NEUROD1Q13562 356 aa10.53□□□□□ -0.72
CTNNA1-244ENST00000627109 ARID3CA6NKF2 412 aa10.52□□□□□ -0.72
CTNNA1-244ENST00000627109 CENPBP07199 599 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-244ENST00000627109 HFM1A2PYH4 1435 aa10.52□□□□□ -0.73
CTNNA1-244ENST00000627109 AKNAQ7Z591 1439 aa10.51□□□□□ -0.73
CTNNA1-244ENST00000627109 NCOA2Q15596 1464 aa10.51□□□□□ -0.73
CTNNA1-244ENST00000627109 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
CTNNA1-244ENST00000627109 PELP1Q8IZL8 1130 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-244ENST00000627109 KCNA4P22459 653 aa10.5□□□□□ -0.73
CTNNA1-244ENST00000627109 TIMELESSQ9UNS1 1208 aa10.5□□□□□ -0.73
CTNNA1-244ENST00000627109 KIAA0556O60303 1618 aa10.49□□□□□ -0.73
CTNNA1-244ENST00000627109 CYB5RLQ6IPT4 315 aa10.48□□□□□ -0.73
CTNNA1-244ENST00000627109 KDM5BQ9UGL1 1544 aa10.48□□□□□ -0.73
CTNNA1-244ENST00000627109 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-244ENST00000627109 PTPRKQ15262 1439 aa10.48□□□□□ -0.73
CTNNA1-244ENST00000627109 ITGAEP38570 1179 aa10.47□□□□□ -0.73
CTNNA1-244ENST00000627109 ADCY10Q96PN6 1610 aa10.47□□□□□ -0.73
CTNNA1-244ENST00000627109 NCBP3Q53F19 620 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-244ENST00000627109 JPH4Q96JJ6 628 aa10.46□□□□□ -0.73
CTNNA1-244ENST00000627109 EPRSP07814 1512 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-244ENST00000627109 TULP1O00294 542 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-244ENST00000627109 MIER1Q8N108 512 aa10.46□□□□□ -0.73
CTNNA1-244ENST00000627109 DISP1Q96F81 1524 aa10.45□□□□□ -0.74
CTNNA1-244ENST00000627109 UACAQ9BZF9 1416 aa10.45□□□□□ -0.74
CTNNA1-244ENST00000627109 NAIPQ13075 1403 aa10.45□□□□□ -0.74
CTNNA1-244ENST00000627109 MIA2Q96PC5 1412 aa10.44□□□□□ -0.74
CTNNA1-244ENST00000627109 KIAA0586Q9BVV6 1533 aa10.44□□□□□ -0.74
CTNNA1-244ENST00000627109 RAPGEF6Q8TEU7 1601 aa10.43□□□□□ -0.74
CTNNA1-244ENST00000627109 DENND4BO75064 1496 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-244ENST00000627109 DNMT1P26358 1616 aaKnown RBP10.42□□□□□ -0.74
CTNNA1-244ENST00000627109 AMER1Q5JTC6 1135 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-244ENST00000627109 GTF3C3Q9Y5Q9 886 aa10.41□□□□□ -0.74
CTNNA1-244ENST00000627109 MAGI1Q96QZ7 1491 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-244ENST00000627109 GRIN2AQ12879 1464 aa10.41□□□□□ -0.74
CTNNA1-244ENST00000627109 CROCC2H7BZ55 1655 aa10.41□□□□□ -0.74
CTNNA1-244ENST00000627109 MTUS2Q5JR59 1369 aa10.4□□□□□ -0.74
CTNNA1-244ENST00000627109 CEP170Q5SW79 1584 aa10.39□□□□□ -0.75
CTNNA1-244ENST00000627109 ADGBQ8N7X0 1667 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms