RNA–Protein interactions for RNA: ENST00000626518.2

LINC01163-201, Transcript of long intergenic non-protein coding RNA 1163, humanhuman

TSL 4

Gene LINC01163, Length 533 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01163-201ENST00000626518 ERCC6Q03468 1493 aa16.96■□□□□ 0.31
LINC01163-201ENST00000626518 MNX1P50219 401 aaPredicted RBP16.93■□□□□ 0.3
LINC01163-201ENST00000626518 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
LINC01163-201ENST00000626518 FARP1Q9Y4F1 1045 aaPredicted RBP16.89■□□□□ 0.29
LINC01163-201ENST00000626518 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
LINC01163-201ENST00000626518 NPM1P06748 294 aaKnown RBP eCLIP16.79■□□□□ 0.28
LINC01163-201ENST00000626518 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
LINC01163-201ENST00000626518 SPOCK2Q92563 424 aa16.79■□□□□ 0.28
LINC01163-201ENST00000626518 POTEHQ6S545 545 aa16.77■□□□□ 0.28
LINC01163-201ENST00000626518 NESP48681 1621 aa16.74■□□□□ 0.27
LINC01163-201ENST00000626518 NUBP1P53384 320 aa16.72■□□□□ 0.27
LINC01163-201ENST00000626518 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
LINC01163-201ENST00000626518 RASEFQ8IZ41 740 aa16.66■□□□□ 0.26
LINC01163-201ENST00000626518 THOC2Q8NI27 1593 aaKnown RBP16.63■□□□□ 0.25
LINC01163-201ENST00000626518 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
LINC01163-201ENST00000626518 TSPYL2Q9H2G4 693 aaPredicted RBP16.58■□□□□ 0.24
LINC01163-201ENST00000626518 HAX1O00165 279 aa16.57■□□□□ 0.24
LINC01163-201ENST00000626518 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
LINC01163-201ENST00000626518 FAM212AQ96EL1 285 aa16.57■□□□□ 0.24
LINC01163-201ENST00000626518 CIZ1Q9ULV3 898 aaPredicted RBP16.57■□□□□ 0.24
LINC01163-201ENST00000626518 C19orf67A6NJJ6 358 aa16.56■□□□□ 0.24
LINC01163-201ENST00000626518 CD44P16070 742 aaKnown RBP16.56■□□□□ 0.24
LINC01163-201ENST00000626518 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
LINC01163-201ENST00000626518 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
LINC01163-201ENST00000626518 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
LINC01163-201ENST00000626518 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
LINC01163-201ENST00000626518 GSE1Q14687 1217 aa16.5■□□□□ 0.23
LINC01163-201ENST00000626518 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
LINC01163-201ENST00000626518 SMARCA4P51532 1647 aa16.47■□□□□ 0.23
LINC01163-201ENST00000626518 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
LINC01163-201ENST00000626518 EVX2Q03828 476 aa16.46■□□□□ 0.23
LINC01163-201ENST00000626518 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
LINC01163-201ENST00000626518 PKD2Q13563 968 aa16.45■□□□□ 0.22
LINC01163-201ENST00000626518 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
LINC01163-201ENST00000626518 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
LINC01163-201ENST00000626518 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
LINC01163-201ENST00000626518 PYGBP11216 843 aa16.37■□□□□ 0.21
LINC01163-201ENST00000626518 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
LINC01163-201ENST00000626518 ECM2O94769 699 aaPredicted RBP16.35■□□□□ 0.21
LINC01163-201ENST00000626518 PHF12Q96QT6 1004 aa16.35■□□□□ 0.21
LINC01163-201ENST00000626518 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
LINC01163-201ENST00000626518 MRC2Q9UBG0 1479 aa16.32■□□□□ 0.2
LINC01163-201ENST00000626518 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
LINC01163-201ENST00000626518 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
LINC01163-201ENST00000626518 WDR62O43379 1518 aa16.29■□□□□ 0.2
LINC01163-201ENST00000626518 CHRM1P11229 460 aaPredicted RBP16.27■□□□□ 0.2
LINC01163-201ENST00000626518 KIF12Q96FN5 646 aa16.26■□□□□ 0.19
LINC01163-201ENST00000626518 MAP3K13O43283 966 aa16.23■□□□□ 0.19
LINC01163-201ENST00000626518 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.18
LINC01163-201ENST00000626518 RGL2O15211 777 aa16.19■□□□□ 0.18
LINC01163-201ENST00000626518 PCDHB13Q9Y5F0 798 aa16.19■□□□□ 0.18
LINC01163-201ENST00000626518 RNF25Q96BH1 459 aaPredicted RBP16.18■□□□□ 0.18
LINC01163-201ENST00000626518 MS4A3Q96HJ5 214 aa16.14■□□□□ 0.17
LINC01163-201ENST00000626518 PCDHB8Q9UN66 801 aa16.14■□□□□ 0.17
LINC01163-201ENST00000626518 IFNL1Q8IU54 200 aa16.13■□□□□ 0.17
LINC01163-201ENST00000626518 SP7Q8TDD2 431 aaPredicted RBP16.13■□□□□ 0.17
LINC01163-201ENST00000626518 SGIP1Q9BQI5 828 aa16.13■□□□□ 0.17
LINC01163-201ENST00000626518 CEP164Q9UPV0 1460 aa16.11■□□□□ 0.17
LINC01163-201ENST00000626518 GALR2O43603 387 aaPredicted RBP16.11■□□□□ 0.17
LINC01163-201ENST00000626518 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
LINC01163-201ENST00000626518 GABBR2O75899 941 aa16.1■□□□□ 0.17
LINC01163-201ENST00000626518 ZNF467Q7Z7K2 595 aaPredicted RBP16.1■□□□□ 0.17
LINC01163-201ENST00000626518 RIMBP3CA6NJZ7 1639 aa16.09■□□□□ 0.17
LINC01163-201ENST00000626518 RIMBP3BA6NNM3 1639 aa16.09■□□□□ 0.17
LINC01163-201ENST00000626518 RIMBP3Q9UFD9 1639 aa16.09■□□□□ 0.17
LINC01163-201ENST00000626518 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
LINC01163-201ENST00000626518 CLCN6P51797 869 aa16.08■□□□□ 0.16
LINC01163-201ENST00000626518 TRPC6Q9Y210 931 aa16.03■□□□□ 0.16
LINC01163-201ENST00000626518 ARHGEF11O15085 1522 aa16.02■□□□□ 0.15
LINC01163-201ENST00000626518 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
LINC01163-201ENST00000626518 CFTRP13569 1480 aa15.99■□□□□ 0.15
LINC01163-201ENST00000626518 VGFO15240 615 aaPredicted RBP15.99■□□□□ 0.15
LINC01163-201ENST00000626518 CYB5RLQ6IPT4 315 aa15.98■□□□□ 0.15
LINC01163-201ENST00000626518 PDAP1Q13442 181 aaKnown RBP15.97■□□□□ 0.15
LINC01163-201ENST00000626518 PSEN1P49768 467 aa15.96■□□□□ 0.15
LINC01163-201ENST00000626518 TAOK2Q9UL54 1235 aa15.96■□□□□ 0.15
LINC01163-201ENST00000626518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.95■□□□□ 0.14
LINC01163-201ENST00000626518 ZFP91Q96JP5 570 aaPredicted RBP15.95■□□□□ 0.14
LINC01163-201ENST00000626518 WIZO95785 1651 aa15.92■□□□□ 0.14
LINC01163-201ENST00000626518 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
LINC01163-201ENST00000626518 TIE1P35590 1138 aa15.89■□□□□ 0.13
LINC01163-201ENST00000626518 TMEM106CQ9BVX2 250 aa15.89■□□□□ 0.13
LINC01163-201ENST00000626518 BMP2KQ9NSY1 1161 aaPredicted RBP15.89■□□□□ 0.13
LINC01163-201ENST00000626518 CHGAP10645 457 aaKnown RBP15.88■□□□□ 0.13
LINC01163-201ENST00000626518 STK25O00506 426 aa15.87■□□□□ 0.13
LINC01163-201ENST00000626518 TTLL13PA6NNM8 815 aa15.86■□□□□ 0.13
LINC01163-201ENST00000626518 DCBLD2Q96PD2 775 aa15.86■□□□□ 0.13
LINC01163-201ENST00000626518 ARAP1Q96P48 1450 aa15.85■□□□□ 0.13
LINC01163-201ENST00000626518 BCL11BQ9C0K0 894 aaPredicted RBP15.85■□□□□ 0.13
LINC01163-201ENST00000626518 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
LINC01163-201ENST00000626518 STK24Q9Y6E0 443 aa15.83■□□□□ 0.12
LINC01163-201ENST00000626518 ATMINO43313 823 aaPredicted RBP15.81■□□□□ 0.12
LINC01163-201ENST00000626518 HS6ST3Q8IZP7 471 aa15.81■□□□□ 0.12
LINC01163-201ENST00000626518 ATN1P54259 1190 aaPredicted RBP15.8■□□□□ 0.12
LINC01163-201ENST00000626518 POTEIP0CG38 1075 aa15.79■□□□□ 0.12
LINC01163-201ENST00000626518 ASTLQ6HA08 431 aaPredicted RBP15.79■□□□□ 0.12
LINC01163-201ENST00000626518 CABP2Q9NPB3 220 aa15.77■□□□□ 0.12
LINC01163-201ENST00000626518 TRIM35Q9UPQ4 493 aa15.76■□□□□ 0.11
LINC01163-201ENST00000626518 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
LINC01163-201ENST00000626518 PELP1Q8IZL8 1130 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms