RNA–Protein interactions for RNA: ENST00000625364.1

PPA1-206, Transcript of pyrophosphatase (inorganic) 1, human

TSL 5 BASIC

Gene PPA1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPA1-206	ENST00000625364	FAM69C	Q0P6D2	419 aa		26.04	■■□□□ 1.76
PPA1-206	ENST00000625364	RUSC2	Q8N2Y8	1516 aa		26.04	■■□□□ 1.76
PPA1-206	ENST00000625364	MAPKBP1	O60336	1514 aa		26.02	■■□□□ 1.76
PPA1-206	ENST00000625364	DIP2B	Q9P265	1576 aa		26	■■□□□ 1.75
PPA1-206	ENST00000625364	SUPT5H	O00267	1087 aa	Known RBP	26	■■□□□ 1.75
PPA1-206	ENST00000625364	NPM1	P06748	294 aa	Known RBP eCLIP	25.99	■■□□□ 1.75
PPA1-206	ENST00000625364	ADCY10	Q96PN6	1610 aa		25.96	■■□□□ 1.75
PPA1-206	ENST00000625364	KDM6B	O15054	1643 aa		25.93	■■□□□ 1.74
PPA1-206	ENST00000625364	TSPOAP1	O95153	1857 aa		25.87	■■□□□ 1.73
PPA1-206	ENST00000625364	KDM4F	A0A1W2PPD8	638 aa		25.84	■■□□□ 1.73
PPA1-206	ENST00000625364	KIAA0586	Q9BVV6	1533 aa		25.8	■■□□□ 1.72
PPA1-206	ENST00000625364	CUL7	Q14999	1698 aa		25.72	■■□□□ 1.71
PPA1-206	ENST00000625364	IGF1R	P08069	1367 aa		25.67	■■□□□ 1.7
PPA1-206	ENST00000625364	PTPRG	P23470	1445 aa		25.66	■■□□□ 1.7
PPA1-206	ENST00000625364	KIF27	Q86VH2	1401 aa		25.64	■■□□□ 1.7
PPA1-206	ENST00000625364	ILDR1	Q86SU0	546 aa	Predicted RBP	25.63	■■□□□ 1.69
PPA1-206	ENST00000625364	ABCC2	Q92887	1545 aa		25.63	■■□□□ 1.69
PPA1-206	ENST00000625364	PPRC1	Q5VV67	1664 aa	Known RBP	25.61	■■□□□ 1.69
PPA1-206	ENST00000625364	TTBK1	Q5TCY1	1321 aa	Predicted RBP	25.61	■■□□□ 1.69
PPA1-206	ENST00000625364	GLI2	P10070	1586 aa		25.59	■■□□□ 1.69
PPA1-206	ENST00000625364	TNIK	Q9UKE5	1360 aa		25.58	■■□□□ 1.69
PPA1-206	ENST00000625364	ASXL2	Q76L83	1435 aa		25.58	■■□□□ 1.69
PPA1-206	ENST00000625364	PLB1	Q6P1J6	1458 aa		25.58	■■□□□ 1.69
PPA1-206	ENST00000625364	CARMIL2	Q6F5E8	1435 aa		25.57	■■□□□ 1.68
PPA1-206	ENST00000625364	ADGRL1	O94910	1474 aa		25.57	■■□□□ 1.68
PPA1-206	ENST00000625364	CARMIL1	Q5VZK9	1371 aa		25.51	■■□□□ 1.67
PPA1-206	ENST00000625364	UHRF1BP1L	A0JNW5	1464 aa		25.51	■■□□□ 1.67
PPA1-206	ENST00000625364	IQGAP2	Q13576	1575 aa		25.51	■■□□□ 1.67
PPA1-206	ENST00000625364	UACA	Q9BZF9	1416 aa		25.46	■■□□□ 1.67
PPA1-206	ENST00000625364	MAP3K4	Q9Y6R4	1608 aa		25.45	■■□□□ 1.66
PPA1-206	ENST00000625364	EPRS	P07814	1512 aa	Known RBP	25.43	■■□□□ 1.66
PPA1-206	ENST00000625364	COL17A1	Q9UMD9	1497 aa	Predicted RBP	25.43	■■□□□ 1.66
PPA1-206	ENST00000625364	TEX14	Q8IWB6	1497 aa		25.41	■■□□□ 1.66
PPA1-206	ENST00000625364	HECW2	Q9P2P5	1572 aa		25.4	■■□□□ 1.66
PPA1-206	ENST00000625364	DISP1	Q96F81	1524 aa		25.4	■■□□□ 1.66
PPA1-206	ENST00000625364	KDM5B	Q9UGL1	1544 aa		25.39	■■□□□ 1.66
PPA1-206	ENST00000625364	ZCCHC11	Q5TAX3	1644 aa	Known RBP	25.37	■■□□□ 1.65
PPA1-206	ENST00000625364	UGGT2	Q9NYU1	1516 aa		25.31	■■□□□ 1.64
PPA1-206	ENST00000625364	KIAA0556	O60303	1618 aa		25.29	■■□□□ 1.64
PPA1-206	ENST00000625364	WDR7	Q9Y4E6	1490 aa		25.26	■■□□□ 1.63
PPA1-206	ENST00000625364	RAPGEF2	Q9Y4G8	1499 aa		25.22	■■□□□ 1.63
PPA1-206	ENST00000625364	CFAP43	Q8NDM7	1665 aa		25.17	■■□□□ 1.62
PPA1-206	ENST00000625364	MAGI3	Q5TCQ9	1506 aa		25.16	■■□□□ 1.62
PPA1-206	ENST00000625364	CD109	Q6YHK3	1445 aa		25.15	■■□□□ 1.62
PPA1-206	ENST00000625364	CTTNBP2	Q8WZ74	1663 aa		25.1	■■□□□ 1.61
PPA1-206	ENST00000625364	KIF21B	O75037	1637 aa		25.1	■■□□□ 1.61
PPA1-206	ENST00000625364	ABCA8	O94911	1581 aa		25.08	■■□□□ 1.61
PPA1-206	ENST00000625364	KCNH8	Q96L42	1107 aa		25.07	■■□□□ 1.6
PPA1-206	ENST00000625364	GOLGA3	Q08378	1498 aa		25.06	■■□□□ 1.6
PPA1-206	ENST00000625364	FBXO41	Q8TF61	875 aa		24.98	■■□□□ 1.59
PPA1-206	ENST00000625364	ARAP3	Q8WWN8	1544 aa		24.97	■■□□□ 1.59
PPA1-206	ENST00000625364	ADAMTSL3	P82987	1691 aa		24.91	■■□□□ 1.58
PPA1-206	ENST00000625364	PTPRM	P28827	1452 aa		24.9	■■□□□ 1.58
PPA1-206	ENST00000625364	ABCA9	Q8IUA7	1624 aa		24.86	■■□□□ 1.57
PPA1-206	ENST00000625364	ARID3C	A6NKF2	412 aa		24.86	■■□□□ 1.57
PPA1-206	ENST00000625364	PHLDB1	Q86UU1	1377 aa		24.85	■■□□□ 1.57
PPA1-206	ENST00000625364	ATP10B	O94823	1461 aa		24.83	■■□□□ 1.57
PPA1-206	ENST00000625364	PRX	Q9BXM0	1461 aa		24.82	■■□□□ 1.56
PPA1-206	ENST00000625364	FAM9A	Q8IZU1	332 aa	Predicted RBP	24.81	■■□□□ 1.56
PPA1-206	ENST00000625364	BCORL1	Q5H9F3	1711 aa		24.81	■■□□□ 1.56
PPA1-206	ENST00000625364	PCF11	O94913	1555 aa	Known RBP	24.79	■■□□□ 1.56
PPA1-206	ENST00000625364	MADD	Q8WXG6	1647 aa		24.79	■■□□□ 1.56
PPA1-206	ENST00000625364	NEO1	Q92859	1461 aa		24.78	■■□□□ 1.56
PPA1-206	ENST00000625364	RAPGEF3	O95398	923 aa		24.78	■■□□□ 1.56
PPA1-206	ENST00000625364	FRMPD1	Q5SYB0	1578 aa		24.76	■■□□□ 1.55
PPA1-206	ENST00000625364	P3H3	Q8IVL6	736 aa		24.75	■■□□□ 1.55
PPA1-206	ENST00000625364	LMTK3	Q96Q04	1460 aa		24.73	■■□□□ 1.55
PPA1-206	ENST00000625364	ARID4B	Q4LE39	1312 aa	Predicted RBP	24.73	■■□□□ 1.55
PPA1-206	ENST00000625364	RAPGEF6	Q8TEU7	1601 aa		24.72	■■□□□ 1.55
PPA1-206	ENST00000625364	SAMD9	Q5K651	1589 aa		24.69	■■□□□ 1.54
PPA1-206	ENST00000625364	ARHGEF40	Q8TER5	1519 aa		24.69	■■□□□ 1.54
PPA1-206	ENST00000625364	RIMS1	Q86UR5	1692 aa	Known RBP	24.69	■■□□□ 1.54
PPA1-206	ENST00000625364	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	24.65	■■□□□ 1.54
PPA1-206	ENST00000625364	HNRNPUL2	Q1KMD3	747 aa	Known RBP	24.65	■■□□□ 1.54
PPA1-206	ENST00000625364	RICTOR	Q6R327	1708 aa		24.62	■■□□□ 1.53
PPA1-206	ENST00000625364	DENND4B	O75064	1496 aa	Predicted RBP	24.61	■■□□□ 1.53
PPA1-206	ENST00000625364	NUP153	P49790	1475 aa	Known RBP	24.6	■■□□□ 1.53
PPA1-206	ENST00000625364	CFAP74	Q9C0B2	1584 aa		24.57	■■□□□ 1.52
PPA1-206	ENST00000625364	HSPA2	P54652	639 aa		24.56	■■□□□ 1.52
PPA1-206	ENST00000625364	FHOD3	Q2V2M9	1422 aa		24.55	■■□□□ 1.52
PPA1-206	ENST00000625364	AKNA	Q7Z591	1439 aa		24.55	■■□□□ 1.52
PPA1-206	ENST00000625364	FANCA	O15360	1455 aa		24.55	■■□□□ 1.52
PPA1-206	ENST00000625364	POGZ	Q7Z3K3	1410 aa		24.54	■■□□□ 1.52
PPA1-206	ENST00000625364	PLPPR3	Q6T4P5	718 aa		24.53	■■□□□ 1.52
PPA1-206	ENST00000625364	ZMYM4	Q5VZL5	1548 aa		24.52	■■□□□ 1.52
PPA1-206	ENST00000625364	ZFYVE16	Q7Z3T8	1539 aa		24.51	■■□□□ 1.51
PPA1-206	ENST00000625364	EFCAB5	A4FU69	1503 aa		24.5	■■□□□ 1.51
PPA1-206	ENST00000625364	SIGLEC1	Q9BZZ2	1709 aa		24.49	■■□□□ 1.51
PPA1-206	ENST00000625364	PLEKHD1	A6NEE1	506 aa		24.49	■■□□□ 1.51
PPA1-206	ENST00000625364	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	24.48	■■□□□ 1.51	4e-12	■■□□□ 13.1
PPA1-206	ENST00000625364	FER1L4	A9Z1Z3	1794 aa		24.47	■■□□□ 1.51
PPA1-206	ENST00000625364	TTC37	Q6PGP7	1564 aa		24.47	■■□□□ 1.51
PPA1-206	ENST00000625364	YEATS2	Q9ULM3	1422 aa		24.46	■■□□□ 1.51
PPA1-206	ENST00000625364	CERK	Q8TCT0	537 aa		24.46	■■□□□ 1.51
PPA1-206	ENST00000625364	CSRNP3	Q8WYN3	585 aa		24.45	■■□□□ 1.5
PPA1-206	ENST00000625364	RANGAP1	P46060	587 aa	Predicted RBP	24.44	■■□□□ 1.5
PPA1-206	ENST00000625364	MAGI2	Q86UL8	1455 aa		24.44	■■□□□ 1.5
PPA1-206	ENST00000625364	HECW1	Q76N89	1606 aa		24.42	■■□□□ 1.5
PPA1-206	ENST00000625364	MLEC	Q14165	292 aa		24.41	■■□□□ 1.5
PPA1-206	ENST00000625364	PREX1	Q8TCU6	1659 aa		24.35	■■□□□ 1.49

Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms