RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 KANK4Q5T7N3 995 aaPredicted RBP29.89■■■□□ 2.38
PCDHB11-202ENST00000624887 CTTNBP2Q8WZ74 1663 aa29.88■■■□□ 2.37
PCDHB11-202ENST00000624887 MAP3K1Q13233 1512 aa29.83■■■□□ 2.37
PCDHB11-202ENST00000624887 EFCAB5A4FU69 1503 aa29.82■■■□□ 2.36
PCDHB11-202ENST00000624887 AQRO60306 1485 aaKnown RBP eCLIP29.81■■■□□ 2.36
PCDHB11-202ENST00000624887 HNRNPUL2Q1KMD3 747 aaKnown RBP29.81■■■□□ 2.36
PCDHB11-202ENST00000624887 FHAD1B1AJZ9 1412 aa29.8■■■□□ 2.36
PCDHB11-202ENST00000624887 ZNF608Q9ULD9 1512 aaPredicted RBP29.77■■■□□ 2.36
PCDHB11-202ENST00000624887 TIAM1Q13009 1591 aa29.76■■■□□ 2.35
PCDHB11-202ENST00000624887 PBRM1Q86U86 1689 aa29.73■■■□□ 2.35
PCDHB11-202ENST00000624887 RRBP1Q9P2E9 1410 aaKnown RBP29.72■■■□□ 2.35
PCDHB11-202ENST00000624887 GRIN2BQ13224 1484 aa29.72■■■□□ 2.35
PCDHB11-202ENST00000624887 FHOD3Q2V2M9 1422 aa29.69■■■□□ 2.34
PCDHB11-202ENST00000624887 PCF11O94913 1555 aaKnown RBP29.68■■■□□ 2.34
PCDHB11-202ENST00000624887 P3H3Q8IVL6 736 aa29.67■■■□□ 2.34
PCDHB11-202ENST00000624887 EIF4G3O43432 1585 aaKnown RBP29.65■■■□□ 2.34
PCDHB11-202ENST00000624887 CFAP43Q8NDM7 1665 aa29.64■■■□□ 2.34
PCDHB11-202ENST00000624887 LRRC9Q6ZRR7 1453 aa29.63■■■□□ 2.33
PCDHB11-202ENST00000624887 FYCO1Q9BQS8 1478 aa29.63■■■□□ 2.33
PCDHB11-202ENST00000624887 SAMD9Q5K651 1589 aa29.62■■■□□ 2.33
PCDHB11-202ENST00000624887 ADAMTS12P58397 1594 aa29.61■■■□□ 2.33
PCDHB11-202ENST00000624887 CASKIN1Q8WXD9 1431 aa29.6■■■□□ 2.33
PCDHB11-202ENST00000624887 CCNB3Q8WWL7 1395 aa29.58■■■□□ 2.33
PCDHB11-202ENST00000624887 FMN1Q68DA7 1419 aa29.57■■■□□ 2.32
PCDHB11-202ENST00000624887 SNAPC4Q5SXM2 1469 aa29.52■■■□□ 2.32
PCDHB11-202ENST00000624887 MAGI1Q96QZ7 1491 aaPredicted RBP29.46■■■□□ 2.31
PCDHB11-202ENST00000624887 ATP1B4Q9UN42 357 aaPredicted RBP29.44■■■□□ 2.3
PCDHB11-202ENST00000624887 PHLDB1Q86UU1 1377 aa29.42■■■□□ 2.3
PCDHB11-202ENST00000624887 IQGAP2Q13576 1575 aa29.41■■■□□ 2.3
PCDHB11-202ENST00000624887 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
PCDHB11-202ENST00000624887 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
PCDHB11-202ENST00000624887 CLSPNQ9HAW4 1339 aa29.33■■■□□ 2.29
PCDHB11-202ENST00000624887 LRRIQ1Q96JM4 1722 aa29.32■■■□□ 2.28
PCDHB11-202ENST00000624887 DHX57Q6P158 1386 aaKnown RBP29.31■■■□□ 2.28
PCDHB11-202ENST00000624887 CHMP7Q8WUX9 453 aaPredicted RBP29.31■■■□□ 2.28
PCDHB11-202ENST00000624887 UGGT2Q9NYU1 1516 aa29.28■■■□□ 2.28
PCDHB11-202ENST00000624887 ITGAEP38570 1179 aa29.24■■■□□ 2.27
PCDHB11-202ENST00000624887 KIAA0586Q9BVV6 1533 aa29.24■■■□□ 2.27
PCDHB11-202ENST00000624887 MTUS2Q5JR59 1369 aa29.23■■■□□ 2.27
PCDHB11-202ENST00000624887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.23■■■□□ 2.27
PCDHB11-202ENST00000624887 FBLN2P98095 1184 aa29.22■■■□□ 2.27
PCDHB11-202ENST00000624887 CCDC18Q5T9S5 1454 aa29.19■■■□□ 2.26
PCDHB11-202ENST00000624887 FAM50AQ14320 339 aaKnown RBP29.18■■■□□ 2.26
PCDHB11-202ENST00000624887 HECW1Q76N89 1606 aa29.18■■■□□ 2.26
PCDHB11-202ENST00000624887 EHBP1L1Q8N3D4 1523 aa29.16■■■□□ 2.26
PCDHB11-202ENST00000624887 CEP170Q5SW79 1584 aa29.16■■■□□ 2.26
PCDHB11-202ENST00000624887 NUP160Q12769 1436 aa29.15■■■□□ 2.26
PCDHB11-202ENST00000624887 RAB3GAP2Q9H2M9 1393 aa29.15■■■□□ 2.26
PCDHB11-202ENST00000624887 FGD6Q6ZV73 1430 aa29.14■■■□□ 2.26
PCDHB11-202ENST00000624887 SETD5Q9C0A6 1442 aa29.13■■■□□ 2.25
PCDHB11-202ENST00000624887 SUPT6HQ7KZ85 1726 aaKnown RBP29.13■■■□□ 2.25
PCDHB11-202ENST00000624887 NCOA2Q15596 1464 aa29.11■■■□□ 2.25
PCDHB11-202ENST00000624887 KIAA0556O60303 1618 aa29.1■■■□□ 2.25
PCDHB11-202ENST00000624887 DISP1Q96F81 1524 aa29.1■■■□□ 2.25
PCDHB11-202ENST00000624887 ZNF316A6NFI3 1004 aaPredicted RBP29.08■■■□□ 2.25
PCDHB11-202ENST00000624887 EPRSP07814 1512 aaKnown RBP29.08■■■□□ 2.25
PCDHB11-202ENST00000624887 MAGI3Q5TCQ9 1506 aa29.06■■■□□ 2.24
PCDHB11-202ENST00000624887 ARHGEF11O15085 1522 aa29.05■■■□□ 2.24
PCDHB11-202ENST00000624887 MYOM3Q5VTT5 1437 aa29.05■■■□□ 2.24
PCDHB11-202ENST00000624887 DIEXFQ68CQ4 756 aaKnown RBP29.02■■■□□ 2.24
PCDHB11-202ENST00000624887 CHD1O14646 1710 aa28.98■■■□□ 2.23
PCDHB11-202ENST00000624887 CDK13Q14004 1512 aaKnown RBP28.97■■■□□ 2.23
PCDHB11-202ENST00000624887 JPH4Q96JJ6 628 aa28.96■■■□□ 2.23
PCDHB11-202ENST00000624887 MAPKBP1O60336 1514 aa28.94■■■□□ 2.22
PCDHB11-202ENST00000624887 RAPGEF6Q8TEU7 1601 aa28.92■■■□□ 2.22
PCDHB11-202ENST00000624887 PTPN23Q9H3S7 1636 aa28.92■■■□□ 2.22
PCDHB11-202ENST00000624887 NUP153P49790 1475 aaKnown RBP28.88■■■□□ 2.21
PCDHB11-202ENST00000624887 CARMIL2Q6F5E8 1435 aa28.88■■■□□ 2.21
PCDHB11-202ENST00000624887 PTPRKQ15262 1439 aa28.87■■■□□ 2.21
PCDHB11-202ENST00000624887 TCOF1Q13428 1488 aaKnown RBP28.87■■■□□ 2.21
PCDHB11-202ENST00000624887 HFM1A2PYH4 1435 aa28.84■■■□□ 2.21
PCDHB11-202ENST00000624887 MIA2Q96PC5 1412 aa28.82■■■□□ 2.2
PCDHB11-202ENST00000624887 ARID3CA6NKF2 412 aa28.79■■■□□ 2.2
PCDHB11-202ENST00000624887 NAIPQ13075 1403 aa28.75■■■□□ 2.19
PCDHB11-202ENST00000624887 PRG4Q92954 1404 aaPredicted RBP28.74■■■□□ 2.19
PCDHB11-202ENST00000624887 CDK11AQ9UQ88 783 aaPredicted RBP28.74■■■□□ 2.19
PCDHB11-202ENST00000624887 PLB1Q6P1J6 1458 aa28.73■■■□□ 2.19
PCDHB11-202ENST00000624887 SHROOM2Q13796 1616 aa28.71■■■□□ 2.19
PCDHB11-202ENST00000624887 UACAQ9BZF9 1416 aa28.68■■■□□ 2.18
PCDHB11-202ENST00000624887 CLASP1Q7Z460 1538 aa28.68■■■□□ 2.18
PCDHB11-202ENST00000624887 TROQ12816 1431 aaPredicted RBP28.66■■■□□ 2.18
PCDHB11-202ENST00000624887 AKNAQ7Z591 1439 aa28.66■■■□□ 2.18
PCDHB11-202ENST00000624887 GCC2Q8IWJ2 1684 aa28.64■■■□□ 2.18
PCDHB11-202ENST00000624887 ABCA8O94911 1581 aa28.63■■■□□ 2.17
PCDHB11-202ENST00000624887 TIMELESSQ9UNS1 1208 aa28.62■■■□□ 2.17
PCDHB11-202ENST00000624887 SIN3AQ96ST3 1273 aa28.61■■■□□ 2.17
PCDHB11-202ENST00000624887 ADCY10Q96PN6 1610 aa28.6■■■□□ 2.17
PCDHB11-202ENST00000624887 PTPRGP23470 1445 aa28.59■■■□□ 2.17
PCDHB11-202ENST00000624887 NEUROD1Q13562 356 aa28.55■■■□□ 2.16
PCDHB11-202ENST00000624887 CHIC2Q9UKJ5 165 aa28.55■■■□□ 2.16
PCDHB11-202ENST00000624887 DNMT1P26358 1616 aaKnown RBP28.54■■■□□ 2.16
PCDHB11-202ENST00000624887 RRP7BPQ9NSQ0 103 aa28.54■■■□□ 2.16
PCDHB11-202ENST00000624887 ITSN2Q9NZM3 1697 aa28.54■■■□□ 2.16
PCDHB11-202ENST00000624887 DAPK1P53355 1430 aa28.53■■■□□ 2.16
PCDHB11-202ENST00000624887 ERCC6L2Q5T890 1561 aa28.52■■■□□ 2.16
PCDHB11-202ENST00000624887 KIF14Q15058 1648 aa28.51■■■□□ 2.15
PCDHB11-202ENST00000624887 ROCK1Q13464 1354 aa28.5■■■□□ 2.15
PCDHB11-202ENST00000624887 ABCC5O15440 1437 aa28.49■■■□□ 2.15
PCDHB11-202ENST00000624887 ATP10BO94823 1461 aa28.49■■■□□ 2.15
PCDHB11-202ENST00000624887 GPATCH8Q9UKJ3 1502 aaKnown RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms