RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 APLP2Q06481 763 aa20.41■□□□□ 0.86
C3orf56-201ENST00000624688 GRIN2BQ13224 1484 aa20.39■□□□□ 0.86
C3orf56-201ENST00000624688 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
C3orf56-201ENST00000624688 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
C3orf56-201ENST00000624688 EFCAB5A4FU69 1503 aa20.37■□□□□ 0.85
C3orf56-201ENST00000624688 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
C3orf56-201ENST00000624688 KANK4Q5T7N3 995 aaPredicted RBP20.3■□□□□ 0.84
C3orf56-201ENST00000624688 FHOD3Q2V2M9 1422 aa20.3■□□□□ 0.84
C3orf56-201ENST00000624688 SAMD9Q5K651 1589 aa20.3■□□□□ 0.84
C3orf56-201ENST00000624688 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
C3orf56-201ENST00000624688 MAP3K1Q13233 1512 aa20.27■□□□□ 0.84
C3orf56-201ENST00000624688 PCF11O94913 1555 aaKnown RBP20.27■□□□□ 0.83
C3orf56-201ENST00000624688 SNAPC4Q5SXM2 1469 aa20.25■□□□□ 0.83
C3orf56-201ENST00000624688 TIAM1Q13009 1591 aa20.25■□□□□ 0.83
C3orf56-201ENST00000624688 IQGAP2Q13576 1575 aa20.2■□□□□ 0.82
C3orf56-201ENST00000624688 CFAP43Q8NDM7 1665 aa20.2■□□□□ 0.82
C3orf56-201ENST00000624688 FYCO1Q9BQS8 1478 aa20.2■□□□□ 0.82
C3orf56-201ENST00000624688 CASKIN1Q8WXD9 1431 aa20.19■□□□□ 0.82
C3orf56-201ENST00000624688 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
C3orf56-201ENST00000624688 FMN1Q68DA7 1419 aa20.18■□□□□ 0.82
C3orf56-201ENST00000624688 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
C3orf56-201ENST00000624688 ZEB1P37275 1124 aaPredicted RBP20.16■□□□□ 0.82
C3orf56-201ENST00000624688 LRRC9Q6ZRR7 1453 aa20.14■□□□□ 0.82
C3orf56-201ENST00000624688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
C3orf56-201ENST00000624688 UGGT2Q9NYU1 1516 aa20.12■□□□□ 0.81
C3orf56-201ENST00000624688 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
C3orf56-201ENST00000624688 RRBP1Q9P2E9 1410 aaKnown RBP20.12■□□□□ 0.81
C3orf56-201ENST00000624688 KIAA0586Q9BVV6 1533 aa20.11■□□□□ 0.81
C3orf56-201ENST00000624688 LRRIQ1Q96JM4 1722 aa20.08■□□□□ 0.81
C3orf56-201ENST00000624688 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.81
C3orf56-201ENST00000624688 ATP1B4Q9UN42 357 aaPredicted RBP20.07■□□□□ 0.8
C3orf56-201ENST00000624688 CEP170Q5SW79 1584 aa20.06■□□□□ 0.8
C3orf56-201ENST00000624688 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
C3orf56-201ENST00000624688 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
C3orf56-201ENST00000624688 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
C3orf56-201ENST00000624688 DISP1Q96F81 1524 aa20.02■□□□□ 0.8
C3orf56-201ENST00000624688 KIAA0556O60303 1618 aa20.01■□□□□ 0.79
C3orf56-201ENST00000624688 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
C3orf56-201ENST00000624688 NUP160Q12769 1436 aa20.01■□□□□ 0.79
C3orf56-201ENST00000624688 PHLDB1Q86UU1 1377 aa20■□□□□ 0.79
C3orf56-201ENST00000624688 FBLN2P98095 1184 aa19.96■□□□□ 0.79
C3orf56-201ENST00000624688 HECW1Q76N89 1606 aa19.96■□□□□ 0.79
C3orf56-201ENST00000624688 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
C3orf56-201ENST00000624688 MTUS2Q5JR59 1369 aa19.9■□□□□ 0.78
C3orf56-201ENST00000624688 MAGI3Q5TCQ9 1506 aa19.9■□□□□ 0.78
C3orf56-201ENST00000624688 EPRSP07814 1512 aaKnown RBP19.89■□□□□ 0.77
C3orf56-201ENST00000624688 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
C3orf56-201ENST00000624688 CHD1O14646 1710 aa19.86■□□□□ 0.77
C3orf56-201ENST00000624688 JPH4Q96JJ6 628 aa19.85■□□□□ 0.77
C3orf56-201ENST00000624688 CDK13Q14004 1512 aaKnown RBP19.85■□□□□ 0.77
C3orf56-201ENST00000624688 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
C3orf56-201ENST00000624688 RAPGEF6Q8TEU7 1601 aa19.85■□□□□ 0.77
C3orf56-201ENST00000624688 NCOA2Q15596 1464 aa19.84■□□□□ 0.77
C3orf56-201ENST00000624688 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
C3orf56-201ENST00000624688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.82■□□□□ 0.76
C3orf56-201ENST00000624688 NUP153P49790 1475 aaKnown RBP19.82■□□□□ 0.76
C3orf56-201ENST00000624688 CARMIL2Q6F5E8 1435 aa19.81■□□□□ 0.76
C3orf56-201ENST00000624688 FGD6Q6ZV73 1430 aa19.81■□□□□ 0.76
C3orf56-201ENST00000624688 ITGAEP38570 1179 aa19.8■□□□□ 0.76
C3orf56-201ENST00000624688 FAM50AQ14320 339 aaKnown RBP19.79■□□□□ 0.76
C3orf56-201ENST00000624688 MYOM3Q5VTT5 1437 aa19.78■□□□□ 0.76
C3orf56-201ENST00000624688 PLB1Q6P1J6 1458 aa19.76■□□□□ 0.75
C3orf56-201ENST00000624688 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
C3orf56-201ENST00000624688 ARID3CA6NKF2 412 aa19.74■□□□□ 0.75
C3orf56-201ENST00000624688 SHROOM2Q13796 1616 aa19.72■□□□□ 0.75
C3orf56-201ENST00000624688 PRG4Q92954 1404 aaPredicted RBP19.71■□□□□ 0.75
C3orf56-201ENST00000624688 ABCA8O94911 1581 aa19.71■□□□□ 0.75
C3orf56-201ENST00000624688 RAB3GAP2Q9H2M9 1393 aa19.7■□□□□ 0.74
C3orf56-201ENST00000624688 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
C3orf56-201ENST00000624688 SETD5Q9C0A6 1442 aa19.69■□□□□ 0.74
C3orf56-201ENST00000624688 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
C3orf56-201ENST00000624688 CLSPNQ9HAW4 1339 aa19.66■□□□□ 0.74
C3orf56-201ENST00000624688 PTPRKQ15262 1439 aa19.65■□□□□ 0.74
C3orf56-201ENST00000624688 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
C3orf56-201ENST00000624688 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
C3orf56-201ENST00000624688 TROQ12816 1431 aaPredicted RBP19.62■□□□□ 0.73
C3orf56-201ENST00000624688 CDK11AQ9UQ88 783 aaPredicted RBP19.62■□□□□ 0.73
C3orf56-201ENST00000624688 PTPRGP23470 1445 aa19.61■□□□□ 0.73
C3orf56-201ENST00000624688 ADCY10Q96PN6 1610 aa19.6■□□□□ 0.73
C3orf56-201ENST00000624688 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
C3orf56-201ENST00000624688 ATP10BO94823 1461 aa19.59■□□□□ 0.73
C3orf56-201ENST00000624688 HFM1A2PYH4 1435 aa19.56■□□□□ 0.72
C3orf56-201ENST00000624688 KIF14Q15058 1648 aa19.56■□□□□ 0.72
C3orf56-201ENST00000624688 MAPKBP1O60336 1514 aa19.55■□□□□ 0.72
C3orf56-201ENST00000624688 NAIPQ13075 1403 aa19.52■□□□□ 0.71
C3orf56-201ENST00000624688 UACAQ9BZF9 1416 aa19.51■□□□□ 0.71
C3orf56-201ENST00000624688 ITSN2Q9NZM3 1697 aa19.5■□□□□ 0.71
C3orf56-201ENST00000624688 GPATCH8Q9UKJ3 1502 aaKnown RBP19.49■□□□□ 0.71
C3orf56-201ENST00000624688 PLEKHD1A6NEE1 506 aa19.48■□□□□ 0.71
C3orf56-201ENST00000624688 DNMT1P26358 1616 aaKnown RBP19.47■□□□□ 0.71
C3orf56-201ENST00000624688 ABCC10Q5T3U5 1492 aa19.47■□□□□ 0.71
C3orf56-201ENST00000624688 GCC2Q8IWJ2 1684 aa19.47■□□□□ 0.71
C3orf56-201ENST00000624688 AKNAQ7Z591 1439 aa19.46■□□□□ 0.71
C3orf56-201ENST00000624688 ZNF644Q9H582 1327 aaPredicted RBP19.46■□□□□ 0.71
C3orf56-201ENST00000624688 DAPK1P53355 1430 aa19.45■□□□□ 0.7
C3orf56-201ENST00000624688 ABCC2Q92887 1545 aa19.45■□□□□ 0.7
C3orf56-201ENST00000624688 CDC42BPAQ5VT25 1732 aa19.44■□□□□ 0.7
C3orf56-201ENST00000624688 ABCC5O15440 1437 aa19.44■□□□□ 0.7
C3orf56-201ENST00000624688 CAMSAP2Q08AD1 1489 aa19.43■□□□□ 0.7
C3orf56-201ENST00000624688 CHIC2Q9UKJ5 165 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms