RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 NPM1P06748 294 aaKnown RBP eCLIP26.18■■□□□ 1.78
RPL13A-214ENST00000624069 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.78
RPL13A-214ENST00000624069 ILDR1Q86SU0 546 aaPredicted RBP26.14■■□□□ 1.78
RPL13A-214ENST00000624069 MAPKBP1O60336 1514 aa26.09■■□□□ 1.77
RPL13A-214ENST00000624069 DIP2BQ9P265 1576 aa26.06■■□□□ 1.76
RPL13A-214ENST00000624069 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
RPL13A-214ENST00000624069 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
RPL13A-214ENST00000624069 KDM6BO15054 1643 aa25.99■■□□□ 1.75
RPL13A-214ENST00000624069 ADCY10Q96PN6 1610 aa25.97■■□□□ 1.75
RPL13A-214ENST00000624069 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.74
RPL13A-214ENST00000624069 KIAA0586Q9BVV6 1533 aa25.86■■□□□ 1.73
RPL13A-214ENST00000624069 TSPOAP1O95153 1857 aa25.81■■□□□ 1.72
RPL13A-214ENST00000624069 PTPRGP23470 1445 aa25.79■■□□□ 1.72
RPL13A-214ENST00000624069 IGF1RP08069 1367 aa25.77■■□□□ 1.72
RPL13A-214ENST00000624069 ADGRL1O94910 1474 aa25.74■■□□□ 1.71
RPL13A-214ENST00000624069 TTBK1Q5TCY1 1321 aaPredicted RBP25.71■■□□□ 1.71
RPL13A-214ENST00000624069 ASXL2Q76L83 1435 aa25.7■■□□□ 1.7
RPL13A-214ENST00000624069 ABCC2Q92887 1545 aa25.69■■□□□ 1.7
RPL13A-214ENST00000624069 PLB1Q6P1J6 1458 aa25.68■■□□□ 1.7
RPL13A-214ENST00000624069 COL17A1Q9UMD9 1497 aaPredicted RBP25.67■■□□□ 1.7
RPL13A-214ENST00000624069 TNIKQ9UKE5 1360 aa25.67■■□□□ 1.7
RPL13A-214ENST00000624069 GLI2P10070 1586 aa25.66■■□□□ 1.7
RPL13A-214ENST00000624069 PPRC1Q5VV67 1664 aaKnown RBP25.63■■□□□ 1.69
RPL13A-214ENST00000624069 CARMIL2Q6F5E8 1435 aa25.61■■□□□ 1.69
RPL13A-214ENST00000624069 KIF27Q86VH2 1401 aa25.61■■□□□ 1.69
RPL13A-214ENST00000624069 UHRF1BP1LA0JNW5 1464 aa25.58■■□□□ 1.69
RPL13A-214ENST00000624069 HECW2Q9P2P5 1572 aa25.57■■□□□ 1.68
RPL13A-214ENST00000624069 CARMIL1Q5VZK9 1371 aa25.55■■□□□ 1.68
RPL13A-214ENST00000624069 UACAQ9BZF9 1416 aa25.54■■□□□ 1.68
RPL13A-214ENST00000624069 CUL7Q14999 1698 aa25.54■■□□□ 1.68
RPL13A-214ENST00000624069 EPRSP07814 1512 aaKnown RBP25.53■■□□□ 1.68
RPL13A-214ENST00000624069 KDM5BQ9UGL1 1544 aa25.47■■□□□ 1.67
RPL13A-214ENST00000624069 TEX14Q8IWB6 1497 aa25.47■■□□□ 1.67
RPL13A-214ENST00000624069 MAP3K4Q9Y6R4 1608 aa25.44■■□□□ 1.66
RPL13A-214ENST00000624069 DISP1Q96F81 1524 aa25.43■■□□□ 1.66
RPL13A-214ENST00000624069 IQGAP2Q13576 1575 aa25.41■■□□□ 1.66
RPL13A-214ENST00000624069 FBXO41Q8TF61 875 aa25.37■■□□□ 1.65
RPL13A-214ENST00000624069 ZCCHC11Q5TAX3 1644 aaKnown RBP25.3■■□□□ 1.64
RPL13A-214ENST00000624069 WDR7Q9Y4E6 1490 aa25.29■■□□□ 1.64
RPL13A-214ENST00000624069 UGGT2Q9NYU1 1516 aa25.28■■□□□ 1.64
RPL13A-214ENST00000624069 CD109Q6YHK3 1445 aa25.27■■□□□ 1.64
RPL13A-214ENST00000624069 MAGI3Q5TCQ9 1506 aa25.26■■□□□ 1.63
RPL13A-214ENST00000624069 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
RPL13A-214ENST00000624069 KCNH8Q96L42 1107 aa25.23■■□□□ 1.63
RPL13A-214ENST00000624069 KIAA0556O60303 1618 aa25.19■■□□□ 1.62
RPL13A-214ENST00000624069 RAPGEF2Q9Y4G8 1499 aa25.18■■□□□ 1.62
RPL13A-214ENST00000624069 CFAP43Q8NDM7 1665 aa25.1■■□□□ 1.61
RPL13A-214ENST00000624069 KIF21BO75037 1637 aa25.08■■□□□ 1.61
RPL13A-214ENST00000624069 PTPRMP28827 1452 aa25.08■■□□□ 1.6
RPL13A-214ENST00000624069 ARAP3Q8WWN8 1544 aa25.07■■□□□ 1.6
RPL13A-214ENST00000624069 EEA1Q15075 1411 aa25.06■■□□□ 1.6
RPL13A-214ENST00000624069 ABCA8O94911 1581 aa25.05■■□□□ 1.6
RPL13A-214ENST00000624069 GOLGA3Q08378 1498 aa25.01■■□□□ 1.59
RPL13A-214ENST00000624069 ADAMTSL3P82987 1691 aa24.98■■□□□ 1.59
RPL13A-214ENST00000624069 PHLDB1Q86UU1 1377 aa24.98■■□□□ 1.59
RPL13A-214ENST00000624069 RAPGEF3O95398 923 aa24.98■■□□□ 1.59
RPL13A-214ENST00000624069 ARID3CA6NKF2 412 aa24.93■■□□□ 1.58
RPL13A-214ENST00000624069 PRXQ9BXM0 1461 aa24.93■■□□□ 1.58
RPL13A-214ENST00000624069 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
RPL13A-214ENST00000624069 ATP10BO94823 1461 aa24.91■■□□□ 1.58
RPL13A-214ENST00000624069 LMTK3Q96Q04 1460 aa24.9■■□□□ 1.58
RPL13A-214ENST00000624069 ARID4BQ4LE39 1312 aaPredicted RBP24.9■■□□□ 1.58
RPL13A-214ENST00000624069 PCF11O94913 1555 aaKnown RBP24.9■■□□□ 1.58
RPL13A-214ENST00000624069 FAM9AQ8IZU1 332 aaPredicted RBP24.9■■□□□ 1.58
RPL13A-214ENST00000624069 NEO1Q92859 1461 aa24.84■■□□□ 1.57
RPL13A-214ENST00000624069 HSPA2P54652 639 aa24.83■■□□□ 1.57
RPL13A-214ENST00000624069 P3H3Q8IVL6 736 aa24.83■■□□□ 1.57
RPL13A-214ENST00000624069 ABCA9Q8IUA7 1624 aa24.83■■□□□ 1.56
RPL13A-214ENST00000624069 CTTNBP2Q8WZ74 1663 aa24.82■■□□□ 1.56
RPL13A-214ENST00000624069 BCORL1Q5H9F3 1711 aa24.82■■□□□ 1.56
RPL13A-214ENST00000624069 MADDQ8WXG6 1647 aa24.81■■□□□ 1.56
RPL13A-214ENST00000624069 CERKQ8TCT0 537 aa24.79■■□□□ 1.56
RPL13A-214ENST00000624069 FRMPD1Q5SYB0 1578 aa24.76■■□□□ 1.55
RPL13A-214ENST00000624069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.71■■□□□ 1.55
RPL13A-214ENST00000624069 HNRNPUL2Q1KMD3 747 aaKnown RBP24.71■■□□□ 1.55
RPL13A-214ENST00000624069 PLPPR3Q6T4P5 718 aa24.7■■□□□ 1.54
RPL13A-214ENST00000624069 DENND4BO75064 1496 aaPredicted RBP24.68■■□□□ 1.54
RPL13A-214ENST00000624069 RIMS1Q86UR5 1692 aaKnown RBP24.67■■□□□ 1.54
RPL13A-214ENST00000624069 ILDR2Q71H61 639 aa24.67■■□□□ 1.54
RPL13A-214ENST00000624069 FHOD3Q2V2M9 1422 aa24.66■■□□□ 1.54
RPL13A-214ENST00000624069 ARHGEF40Q8TER5 1519 aa24.65■■□□□ 1.54
RPL13A-214ENST00000624069 AKNAQ7Z591 1439 aa24.63■■□□□ 1.53
RPL13A-214ENST00000624069 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
RPL13A-214ENST00000624069 SOCS7O14512 581 aa24.62■■□□□ 1.53
RPL13A-214ENST00000624069 DISP3Q9P2K9 1392 aa24.6■■□□□ 1.53
RPL13A-214ENST00000624069 PLEKHD1A6NEE1 506 aa24.6■■□□□ 1.53
RPL13A-214ENST00000624069 FANCAO15360 1455 aa24.58■■□□□ 1.53
RPL13A-214ENST00000624069 NUP153P49790 1475 aaKnown RBP24.58■■□□□ 1.53
RPL13A-214ENST00000624069 RAPGEF6Q8TEU7 1601 aa24.58■■□□□ 1.53
RPL13A-214ENST00000624069 MLECQ14165 292 aa24.58■■□□□ 1.53
RPL13A-214ENST00000624069 YEATS2Q9ULM3 1422 aa24.58■■□□□ 1.53
RPL13A-214ENST00000624069 EHMT2Q96KQ7 1210 aa24.57■■□□□ 1.52
RPL13A-214ENST00000624069 RICTORQ6R327 1708 aa24.55■■□□□ 1.52
RPL13A-214ENST00000624069 SAMD9Q5K651 1589 aa24.54■■□□□ 1.52
RPL13A-214ENST00000624069 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
RPL13A-214ENST00000624069 MAGI2Q86UL8 1455 aa24.51■■□□□ 1.51
RPL13A-214ENST00000624069 ZMYM4Q5VZL5 1548 aa24.51■■□□□ 1.51
RPL13A-214ENST00000624069 ZFYVE16Q7Z3T8 1539 aa24.51■■□□□ 1.51
RPL13A-214ENST00000624069 SIGLEC1Q9BZZ2 1709 aa24.49■■□□□ 1.51
RPL13A-214ENST00000624069 EFCAB5A4FU69 1503 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms