RNA–Protein interactions for RNA: ENST00000622934.3

SMIM11B-203, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-203ENST00000622934 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
SMIM11B-203ENST00000622934 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
SMIM11B-203ENST00000622934 SOGA1O94964 1423 aa14.36□□□□□ -0.11
SMIM11B-203ENST00000622934 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
SMIM11B-203ENST00000622934 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
SMIM11B-203ENST00000622934 GRIN2BQ13224 1484 aa14.33□□□□□ -0.12
SMIM11B-203ENST00000622934 KIF13AQ9H1H9 1805 aa14.27□□□□□ -0.12
SMIM11B-203ENST00000622934 KDM4FA0A1W2PPD8 638 aa14.25□□□□□ -0.13
SMIM11B-203ENST00000622934 FGD5Q6ZNL6 1462 aa14.24□□□□□ -0.13
SMIM11B-203ENST00000622934 SLC4A2P04920 1241 aa14.21□□□□□ -0.13
SMIM11B-203ENST00000622934 ERCC6L2Q5T890 1561 aa14.21□□□□□ -0.14
SMIM11B-203ENST00000622934 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
SMIM11B-203ENST00000622934 FAM69CQ0P6D2 419 aa14.17□□□□□ -0.14
SMIM11B-203ENST00000622934 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
SMIM11B-203ENST00000622934 KDM6BO15054 1643 aa14.15□□□□□ -0.14
SMIM11B-203ENST00000622934 ABCC10Q5T3U5 1492 aa14.14□□□□□ -0.15
SMIM11B-203ENST00000622934 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
SMIM11B-203ENST00000622934 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
SMIM11B-203ENST00000622934 CUX1P39880 1505 aa14.1□□□□□ -0.15
SMIM11B-203ENST00000622934 NUP160Q12769 1436 aa14.1□□□□□ -0.15
SMIM11B-203ENST00000622934 SHROOM2Q13796 1616 aa14.1□□□□□ -0.15
SMIM11B-203ENST00000622934 DIP2BQ9P265 1576 aa14.08□□□□□ -0.16
SMIM11B-203ENST00000622934 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.16
SMIM11B-203ENST00000622934 MAPKBP1O60336 1514 aa14.07□□□□□ -0.16
SMIM11B-203ENST00000622934 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
SMIM11B-203ENST00000622934 HECW2Q9P2P5 1572 aa14.04□□□□□ -0.16
SMIM11B-203ENST00000622934 MYCNP04198 464 aaPredicted RBP14.03□□□□□ -0.16
SMIM11B-203ENST00000622934 PRG4Q92954 1404 aaPredicted RBP14.03□□□□□ -0.16
SMIM11B-203ENST00000622934 ADAMTS12P58397 1594 aa14.03□□□□□ -0.16
SMIM11B-203ENST00000622934 ADGRL1O94910 1474 aa14.02□□□□□ -0.16
SMIM11B-203ENST00000622934 FBXO41Q8TF61 875 aa14.01□□□□□ -0.17
SMIM11B-203ENST00000622934 TSPOAP1O95153 1857 aa14□□□□□ -0.17
SMIM11B-203ENST00000622934 ATXN8OSP0DMR3 200 aa14□□□□□ -0.17
SMIM11B-203ENST00000622934 FHAD1B1AJZ9 1412 aa13.98□□□□□ -0.17
SMIM11B-203ENST00000622934 JPH4Q96JJ6 628 aa13.96□□□□□ -0.17
SMIM11B-203ENST00000622934 ADCY10Q96PN6 1610 aa13.93□□□□□ -0.18
SMIM11B-203ENST00000622934 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.19
SMIM11B-203ENST00000622934 ERICH3Q5RHP9 1530 aa13.88□□□□□ -0.19
SMIM11B-203ENST00000622934 LMTK3Q96Q04 1460 aa13.85□□□□□ -0.19
SMIM11B-203ENST00000622934 RUSC2Q8N2Y8 1516 aa13.85□□□□□ -0.19
SMIM11B-203ENST00000622934 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
SMIM11B-203ENST00000622934 GLI2P10070 1586 aa13.8□□□□□ -0.2
SMIM11B-203ENST00000622934 PPRC1Q5VV67 1664 aaKnown RBP13.8□□□□□ -0.2
SMIM11B-203ENST00000622934 PLB1Q6P1J6 1458 aa13.79□□□□□ -0.2
SMIM11B-203ENST00000622934 TEX14Q8IWB6 1497 aa13.76□□□□□ -0.21
SMIM11B-203ENST00000622934 COL17A1Q9UMD9 1497 aaPredicted RBP13.75□□□□□ -0.21
SMIM11B-203ENST00000622934 ASXL2Q76L83 1435 aa13.75□□□□□ -0.21
SMIM11B-203ENST00000622934 ABCC2Q92887 1545 aa13.74□□□□□ -0.21
SMIM11B-203ENST00000622934 PTPRGP23470 1445 aa13.73□□□□□ -0.21
SMIM11B-203ENST00000622934 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
SMIM11B-203ENST00000622934 SOCS7O14512 581 aa13.72□□□□□ -0.21
SMIM11B-203ENST00000622934 KIAA0586Q9BVV6 1533 aa13.72□□□□□ -0.21
SMIM11B-203ENST00000622934 FKBP8Q14318 412 aa13.71□□□□□ -0.21
SMIM11B-203ENST00000622934 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
SMIM11B-203ENST00000622934 MAP3K4Q9Y6R4 1608 aa13.68□□□□□ -0.22
SMIM11B-203ENST00000622934 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
SMIM11B-203ENST00000622934 TTBK1Q5TCY1 1321 aaPredicted RBP13.67□□□□□ -0.22
SMIM11B-203ENST00000622934 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
SMIM11B-203ENST00000622934 EPRSP07814 1512 aaKnown RBP13.66□□□□□ -0.22
SMIM11B-203ENST00000622934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMIM11B-203ENST00000622934 TNIKQ9UKE5 1360 aa13.66□□□□□ -0.22
SMIM11B-203ENST00000622934 CUL7Q14999 1698 aa13.66□□□□□ -0.22
SMIM11B-203ENST00000622934 CARMIL2Q6F5E8 1435 aa13.65□□□□□ -0.22
SMIM11B-203ENST00000622934 UHRF1BP1LA0JNW5 1464 aa13.64□□□□□ -0.23
SMIM11B-203ENST00000622934 DISP3Q9P2K9 1392 aa13.64□□□□□ -0.23
SMIM11B-203ENST00000622934 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
SMIM11B-203ENST00000622934 ILDR2Q71H61 639 aa13.61□□□□□ -0.23
SMIM11B-203ENST00000622934 UACAQ9BZF9 1416 aa13.6□□□□□ -0.23
SMIM11B-203ENST00000622934 KDM5BQ9UGL1 1544 aa13.58□□□□□ -0.24
SMIM11B-203ENST00000622934 KIF21BO75037 1637 aa13.57□□□□□ -0.24
SMIM11B-203ENST00000622934 PTPRMP28827 1452 aa13.57□□□□□ -0.24
SMIM11B-203ENST00000622934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
SMIM11B-203ENST00000622934 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
SMIM11B-203ENST00000622934 PCF11O94913 1555 aaKnown RBP13.57□□□□□ -0.24
SMIM11B-203ENST00000622934 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
SMIM11B-203ENST00000622934 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
SMIM11B-203ENST00000622934 ZCCHC11Q5TAX3 1644 aaKnown RBP13.53□□□□□ -0.24
SMIM11B-203ENST00000622934 CERKQ8TCT0 537 aa13.53□□□□□ -0.24
SMIM11B-203ENST00000622934 WDR7Q9Y4E6 1490 aa13.53□□□□□ -0.24
SMIM11B-203ENST00000622934 MAGI3Q5TCQ9 1506 aa13.53□□□□□ -0.24
SMIM11B-203ENST00000622934 CD109Q6YHK3 1445 aa13.52□□□□□ -0.25
SMIM11B-203ENST00000622934 ADAMTSL3P82987 1691 aa13.51□□□□□ -0.25
SMIM11B-203ENST00000622934 IGF1RP08069 1367 aa13.51□□□□□ -0.25
SMIM11B-203ENST00000622934 CFAP43Q8NDM7 1665 aa13.5□□□□□ -0.25
SMIM11B-203ENST00000622934 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
SMIM11B-203ENST00000622934 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
SMIM11B-203ENST00000622934 KIF27Q86VH2 1401 aa13.47□□□□□ -0.25
SMIM11B-203ENST00000622934 SPATA31D1Q6ZQQ2 1576 aa13.47□□□□□ -0.25
SMIM11B-203ENST00000622934 ARAP3Q8WWN8 1544 aa13.44□□□□□ -0.26
SMIM11B-203ENST00000622934 DISP1Q96F81 1524 aa13.44□□□□□ -0.26
SMIM11B-203ENST00000622934 SLC24A1O60721 1099 aa13.43□□□□□ -0.26
SMIM11B-203ENST00000622934 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
SMIM11B-203ENST00000622934 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
SMIM11B-203ENST00000622934 BCORL1Q5H9F3 1711 aa13.42□□□□□ -0.26
SMIM11B-203ENST00000622934 KCNH8Q96L42 1107 aa13.42□□□□□ -0.26
SMIM11B-203ENST00000622934 ARID4BQ4LE39 1312 aaPredicted RBP13.41□□□□□ -0.26
SMIM11B-203ENST00000622934 HSPA2P54652 639 aa13.41□□□□□ -0.26
SMIM11B-203ENST00000622934 PHLDB1Q86UU1 1377 aa13.39□□□□□ -0.27
SMIM11B-203ENST00000622934 UGGT2Q9NYU1 1516 aa13.38□□□□□ -0.27
SMIM11B-203ENST00000622934 KIAA0556O60303 1618 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms