RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 IFT140Q96RY7 1462 aa21.18■□□□□ 0.98
EPB42-210ENST00000622454 AQRO60306 1485 aaKnown RBP eCLIP21.17■□□□□ 0.98
EPB42-210ENST00000622454 KANK4Q5T7N3 995 aaPredicted RBP21.16■□□□□ 0.98
EPB42-210ENST00000622454 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
EPB42-210ENST00000622454 EFCAB5A4FU69 1503 aa21.14■□□□□ 0.97
EPB42-210ENST00000622454 MAP3K1Q13233 1512 aa21.13■□□□□ 0.97
EPB42-210ENST00000622454 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
EPB42-210ENST00000622454 HNRNPUL2Q1KMD3 747 aaKnown RBP21.12■□□□□ 0.97
EPB42-210ENST00000622454 ZNF608Q9ULD9 1512 aaPredicted RBP21.11■□□□□ 0.97
EPB42-210ENST00000622454 TIAM1Q13009 1591 aa21.1■□□□□ 0.97
EPB42-210ENST00000622454 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
EPB42-210ENST00000622454 PCF11O94913 1555 aaKnown RBP21.04■□□□□ 0.96
EPB42-210ENST00000622454 RRBP1Q9P2E9 1410 aaKnown RBP21.04■□□□□ 0.96
EPB42-210ENST00000622454 FHOD3Q2V2M9 1422 aa21.03■□□□□ 0.96
EPB42-210ENST00000622454 P3H3Q8IVL6 736 aa21.03■□□□□ 0.96
EPB42-210ENST00000622454 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
EPB42-210ENST00000622454 CFAP43Q8NDM7 1665 aa21.02■□□□□ 0.96
EPB42-210ENST00000622454 ADAMTS12P58397 1594 aa21.02■□□□□ 0.96
EPB42-210ENST00000622454 FYCO1Q9BQS8 1478 aa21■□□□□ 0.95
EPB42-210ENST00000622454 LRRC9Q6ZRR7 1453 aa20.99■□□□□ 0.95
EPB42-210ENST00000622454 SAMD9Q5K651 1589 aa20.99■□□□□ 0.95
EPB42-210ENST00000622454 CASKIN1Q8WXD9 1431 aa20.97■□□□□ 0.95
EPB42-210ENST00000622454 FMN1Q68DA7 1419 aa20.96■□□□□ 0.95
EPB42-210ENST00000622454 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
EPB42-210ENST00000622454 SNAPC4Q5SXM2 1469 aa20.95■□□□□ 0.94
EPB42-210ENST00000622454 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.94
EPB42-210ENST00000622454 IQGAP2Q13576 1575 aa20.86■□□□□ 0.93
EPB42-210ENST00000622454 MAGI1Q96QZ7 1491 aaPredicted RBP20.86■□□□□ 0.93
EPB42-210ENST00000622454 PHLDB1Q86UU1 1377 aa20.83■□□□□ 0.92
EPB42-210ENST00000622454 GRIN2AQ12879 1464 aa20.83■□□□□ 0.92
EPB42-210ENST00000622454 LRRIQ1Q96JM4 1722 aa20.8■□□□□ 0.92
EPB42-210ENST00000622454 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
EPB42-210ENST00000622454 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
EPB42-210ENST00000622454 FBLN2P98095 1184 aa20.78■□□□□ 0.92
EPB42-210ENST00000622454 CLSPNQ9HAW4 1339 aa20.77■□□□□ 0.92
EPB42-210ENST00000622454 DHX57Q6P158 1386 aaKnown RBP20.75■□□□□ 0.91
EPB42-210ENST00000622454 KIAA0586Q9BVV6 1533 aa20.75■□□□□ 0.91
EPB42-210ENST00000622454 UGGT2Q9NYU1 1516 aa20.74■□□□□ 0.91
EPB42-210ENST00000622454 ITGAEP38570 1179 aa20.74■□□□□ 0.91
EPB42-210ENST00000622454 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
EPB42-210ENST00000622454 CEP170Q5SW79 1584 aa20.7■□□□□ 0.9
EPB42-210ENST00000622454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.7■□□□□ 0.9
EPB42-210ENST00000622454 HECW1Q76N89 1606 aa20.7■□□□□ 0.9
EPB42-210ENST00000622454 CCDC18Q5T9S5 1454 aa20.7■□□□□ 0.9
EPB42-210ENST00000622454 FAM50AQ14320 339 aaKnown RBP20.69■□□□□ 0.9
EPB42-210ENST00000622454 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
EPB42-210ENST00000622454 EHBP1L1Q8N3D4 1523 aa20.67■□□□□ 0.9
EPB42-210ENST00000622454 FGD6Q6ZV73 1430 aa20.65■□□□□ 0.9
EPB42-210ENST00000622454 RAB3GAP2Q9H2M9 1393 aa20.64■□□□□ 0.9
EPB42-210ENST00000622454 NUP160Q12769 1436 aa20.64■□□□□ 0.89
EPB42-210ENST00000622454 KIAA0556O60303 1618 aa20.63■□□□□ 0.89
EPB42-210ENST00000622454 SETD5Q9C0A6 1442 aa20.63■□□□□ 0.89
EPB42-210ENST00000622454 NCOA2Q15596 1464 aa20.63■□□□□ 0.89
EPB42-210ENST00000622454 DISP1Q96F81 1524 aa20.63■□□□□ 0.89
EPB42-210ENST00000622454 EPRSP07814 1512 aaKnown RBP20.61■□□□□ 0.89
EPB42-210ENST00000622454 ZNF316A6NFI3 1004 aaPredicted RBP20.59■□□□□ 0.89
EPB42-210ENST00000622454 MAGI3Q5TCQ9 1506 aa20.59■□□□□ 0.89
EPB42-210ENST00000622454 MYOM3Q5VTT5 1437 aa20.59■□□□□ 0.89
EPB42-210ENST00000622454 ARHGEF11O15085 1522 aa20.57■□□□□ 0.88
EPB42-210ENST00000622454 DIEXFQ68CQ4 756 aaKnown RBP20.57■□□□□ 0.88
EPB42-210ENST00000622454 CHD1O14646 1710 aa20.55■□□□□ 0.88
EPB42-210ENST00000622454 JPH4Q96JJ6 628 aa20.55■□□□□ 0.88
EPB42-210ENST00000622454 CDK13Q14004 1512 aaKnown RBP20.53■□□□□ 0.88
EPB42-210ENST00000622454 RAPGEF6Q8TEU7 1601 aa20.51■□□□□ 0.87
EPB42-210ENST00000622454 PTPN23Q9H3S7 1636 aa20.51■□□□□ 0.87
EPB42-210ENST00000622454 CARMIL2Q6F5E8 1435 aa20.5■□□□□ 0.87
EPB42-210ENST00000622454 MAPKBP1O60336 1514 aa20.49■□□□□ 0.87
EPB42-210ENST00000622454 ARID3CA6NKF2 412 aa20.47■□□□□ 0.87
EPB42-210ENST00000622454 NUP153P49790 1475 aaKnown RBP20.46■□□□□ 0.87
EPB42-210ENST00000622454 TCOF1Q13428 1488 aaKnown RBP20.44■□□□□ 0.86
EPB42-210ENST00000622454 HFM1A2PYH4 1435 aa20.43■□□□□ 0.86
EPB42-210ENST00000622454 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
EPB42-210ENST00000622454 MIA2Q96PC5 1412 aa20.42■□□□□ 0.86
EPB42-210ENST00000622454 PLB1Q6P1J6 1458 aa20.4■□□□□ 0.86
EPB42-210ENST00000622454 PRG4Q92954 1404 aaPredicted RBP20.4■□□□□ 0.86
EPB42-210ENST00000622454 CDK11AQ9UQ88 783 aaPredicted RBP20.39■□□□□ 0.85
EPB42-210ENST00000622454 NAIPQ13075 1403 aa20.36■□□□□ 0.85
EPB42-210ENST00000622454 SHROOM2Q13796 1616 aa20.32■□□□□ 0.84
EPB42-210ENST00000622454 UACAQ9BZF9 1416 aa20.32■□□□□ 0.84
EPB42-210ENST00000622454 GCC2Q8IWJ2 1684 aa20.32■□□□□ 0.84
EPB42-210ENST00000622454 TROQ12816 1431 aaPredicted RBP20.3■□□□□ 0.84
EPB42-210ENST00000622454 AKNAQ7Z591 1439 aa20.3■□□□□ 0.84
EPB42-210ENST00000622454 ABCA8O94911 1581 aa20.29■□□□□ 0.84
EPB42-210ENST00000622454 PTPRGP23470 1445 aa20.29■□□□□ 0.84
EPB42-210ENST00000622454 ADCY10Q96PN6 1610 aa20.28■□□□□ 0.84
EPB42-210ENST00000622454 TIMELESSQ9UNS1 1208 aa20.28■□□□□ 0.84
EPB42-210ENST00000622454 SIN3AQ96ST3 1273 aa20.26■□□□□ 0.83
EPB42-210ENST00000622454 ITSN2Q9NZM3 1697 aa20.26■□□□□ 0.83
EPB42-210ENST00000622454 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
EPB42-210ENST00000622454 DNMT1P26358 1616 aaKnown RBP20.24■□□□□ 0.83
EPB42-210ENST00000622454 NEUROD1Q13562 356 aa20.24■□□□□ 0.83
EPB42-210ENST00000622454 CHIC2Q9UKJ5 165 aa20.24■□□□□ 0.83
EPB42-210ENST00000622454 ERCC6L2Q5T890 1561 aa20.24■□□□□ 0.83
EPB42-210ENST00000622454 RRP7BPQ9NSQ0 103 aa20.23■□□□□ 0.83
EPB42-210ENST00000622454 DAPK1P53355 1430 aa20.22■□□□□ 0.83
EPB42-210ENST00000622454 KIF14Q15058 1648 aa20.21■□□□□ 0.83
EPB42-210ENST00000622454 ATP10BO94823 1461 aa20.19■□□□□ 0.82
EPB42-210ENST00000622454 ROCK1Q13464 1354 aa20.19■□□□□ 0.82
EPB42-210ENST00000622454 GPATCH8Q9UKJ3 1502 aaKnown RBP20.17■□□□□ 0.82
EPB42-210ENST00000622454 ABCC5O15440 1437 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms