RNA–Protein interactions for RNA: ENST00000622445.4

CACNB1-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 5 BASIC

Gene CACNB1, Length 3,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-212ENST00000622445 KIF27Q86VH2 1401 aa17.95■□□□□ 0.46
CACNB1-212ENST00000622445 FOXD1Q16676 465 aa17.95■□□□□ 0.46
CACNB1-212ENST00000622445 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
CACNB1-212ENST00000622445 RBM19Q9Y4C8 960 aaKnown RBP17.92■□□□□ 0.46
CACNB1-212ENST00000622445 CUX2O14529 1486 aa17.92■□□□□ 0.46
CACNB1-212ENST00000622445 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
CACNB1-212ENST00000622445 PHLDB1Q86UU1 1377 aa17.87■□□□□ 0.45
CACNB1-212ENST00000622445 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
CACNB1-212ENST00000622445 SETD5Q9C0A6 1442 aa17.85■□□□□ 0.45
CACNB1-212ENST00000622445 CARMIL1Q5VZK9 1371 aa17.83■□□□□ 0.45
CACNB1-212ENST00000622445 SALL2Q9Y467 1007 aaPredicted RBP17.82■□□□□ 0.44
CACNB1-212ENST00000622445 FHOD3Q2V2M9 1422 aa17.82■□□□□ 0.44
CACNB1-212ENST00000622445 PPP1R15AO75807 674 aaPredicted RBP17.82■□□□□ 0.44
CACNB1-212ENST00000622445 BICRAQ9NZM4 1560 aa17.81■□□□□ 0.44
CACNB1-212ENST00000622445 ARHGAP35Q9NRY4 1499 aa17.81■□□□□ 0.44
CACNB1-212ENST00000622445 B4GALNT3Q6L9W6 998 aa17.79■□□□□ 0.44
CACNB1-212ENST00000622445 CDK11AQ9UQ88 783 aaPredicted RBP17.79■□□□□ 0.44
CACNB1-212ENST00000622445 WDR97A6NE52 1622 aa17.78■□□□□ 0.44
CACNB1-212ENST00000622445 MTUS2Q5JR59 1369 aa17.77■□□□□ 0.44
CACNB1-212ENST00000622445 PRXQ9BXM0 1461 aa17.76■□□□□ 0.43
CACNB1-212ENST00000622445 NBR1Q14596 966 aa17.75■□□□□ 0.43
CACNB1-212ENST00000622445 CCDC184Q52MB2 194 aa17.75■□□□□ 0.43
CACNB1-212ENST00000622445 BCL11AQ9H165 835 aa17.74■□□□□ 0.43
CACNB1-212ENST00000622445 IGF1RP08069 1367 aa17.74■□□□□ 0.43
CACNB1-212ENST00000622445 MRS2Q9HD23 443 aa17.74■□□□□ 0.43
CACNB1-212ENST00000622445 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
CACNB1-212ENST00000622445 ZNF777Q9ULD5 760 aaPredicted RBP17.72■□□□□ 0.43
CACNB1-212ENST00000622445 CUX1P39880 1505 aa17.72■□□□□ 0.43
CACNB1-212ENST00000622445 HSPA5P11021 654 aaKnown RBP17.71■□□□□ 0.43
CACNB1-212ENST00000622445 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
CACNB1-212ENST00000622445 TDRD9Q8NDG6 1382 aaKnown RBP17.64■□□□□ 0.42
CACNB1-212ENST00000622445 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
CACNB1-212ENST00000622445 MSH5O43196 834 aa17.62■□□□□ 0.41
CACNB1-212ENST00000622445 RAD54L2Q9Y4B4 1467 aa17.62■□□□□ 0.41
CACNB1-212ENST00000622445 MAPKBP1O60336 1514 aa17.62■□□□□ 0.41
CACNB1-212ENST00000622445 EIF4G2P78344 907 aaKnown RBP eCLIP17.61■□□□□ 0.412e-8■■■■■ 35.8
CACNB1-212ENST00000622445 FBLN2P98095 1184 aa17.61■□□□□ 0.41
CACNB1-212ENST00000622445 KDM2AQ9Y2K7 1162 aa17.6■□□□□ 0.41
CACNB1-212ENST00000622445 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
CACNB1-212ENST00000622445 L3MBTL2Q969R5 705 aa17.58■□□□□ 0.4
CACNB1-212ENST00000622445 CCER2I3L3R5 266 aa17.57■□□□□ 0.4
CACNB1-212ENST00000622445 WASHC2AQ641Q2 1341 aa17.55■□□□□ 0.4
CACNB1-212ENST00000622445 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
CACNB1-212ENST00000622445 SLC4A1APQ9BWU0 796 aaKnown RBP17.55■□□□□ 0.4
CACNB1-212ENST00000622445 C11orf95C9JLR9 678 aaPredicted RBP17.54■□□□□ 0.4
CACNB1-212ENST00000622445 ERICH3Q5RHP9 1530 aa17.53■□□□□ 0.4
CACNB1-212ENST00000622445 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
CACNB1-212ENST00000622445 FHAD1B1AJZ9 1412 aa17.51■□□□□ 0.39
CACNB1-212ENST00000622445 CCDC136Q96JN2 1154 aa17.48■□□□□ 0.39
CACNB1-212ENST00000622445 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
CACNB1-212ENST00000622445 MPHOSPH9Q99550 1183 aa17.48■□□□□ 0.39
CACNB1-212ENST00000622445 ZNF644Q9H582 1327 aaPredicted RBP17.48■□□□□ 0.39
CACNB1-212ENST00000622445 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
CACNB1-212ENST00000622445 TIAM1Q13009 1591 aa17.47■□□□□ 0.39
CACNB1-212ENST00000622445 PTPRKQ15262 1439 aa17.44■□□□□ 0.38
CACNB1-212ENST00000622445 PEG3Q9GZU2 1588 aa17.43■□□□□ 0.38
CACNB1-212ENST00000622445 PPP4R2Q9NY27 417 aa17.43■□□□□ 0.38
CACNB1-212ENST00000622445 CFTRP13569 1480 aa17.43■□□□□ 0.38
CACNB1-212ENST00000622445 NESP48681 1621 aa17.42■□□□□ 0.38
CACNB1-212ENST00000622445 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.38
CACNB1-212ENST00000622445 TMC1Q8TDI8 760 aa17.41■□□□□ 0.38
CACNB1-212ENST00000622445 FGD6Q6ZV73 1430 aa17.41■□□□□ 0.38
CACNB1-212ENST00000622445 NBPF8Q3BBV2 869 aa17.41■□□□□ 0.38
CACNB1-212ENST00000622445 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
CACNB1-212ENST00000622445 TIMELESSQ9UNS1 1208 aa17.4■□□□□ 0.38
CACNB1-212ENST00000622445 RGL3Q3MIN7 710 aa17.39■□□□□ 0.37
CACNB1-212ENST00000622445 PCF11O94913 1555 aaKnown RBP17.39■□□□□ 0.37
CACNB1-212ENST00000622445 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
CACNB1-212ENST00000622445 RTN4Q9NQC3 1192 aaKnown RBP17.38■□□□□ 0.37
CACNB1-212ENST00000622445 PAK3O75914 559 aaPredicted RBP17.36■□□□□ 0.37
CACNB1-212ENST00000622445 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
CACNB1-212ENST00000622445 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
CACNB1-212ENST00000622445 DEKP35659 375 aaKnown RBP17.34■□□□□ 0.37
CACNB1-212ENST00000622445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.37
CACNB1-212ENST00000622445 LAS1LQ9Y4W2 734 aaKnown RBP17.34■□□□□ 0.37
CACNB1-212ENST00000622445 RTL5Q5HYW3 569 aaPredicted RBP17.32■□□□□ 0.36
CACNB1-212ENST00000622445 SKAP1Q86WV1 359 aa17.32■□□□□ 0.36
CACNB1-212ENST00000622445 AKNAQ7Z591 1439 aa17.3■□□□□ 0.36
CACNB1-212ENST00000622445 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
CACNB1-212ENST00000622445 ANP32AP39687 249 aaKnown RBP17.3■□□□□ 0.36
CACNB1-212ENST00000622445 KIF7Q2M1P5 1343 aa17.3■□□□□ 0.36
CACNB1-212ENST00000622445 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
CACNB1-212ENST00000622445 NAIPQ13075 1403 aa17.28■□□□□ 0.36
CACNB1-212ENST00000622445 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
CACNB1-212ENST00000622445 PKD2Q13563 968 aa17.28■□□□□ 0.36
CACNB1-212ENST00000622445 CARD11Q9BXL7 1154 aa17.27■□□□□ 0.36
CACNB1-212ENST00000622445 NOP58Q9Y2X3 529 aaKnown RBP17.27■□□□□ 0.36
CACNB1-212ENST00000622445 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.35
CACNB1-212ENST00000622445 CFDP1Q9UEE9 299 aaPredicted RBP17.27■□□□□ 0.35
CACNB1-212ENST00000622445 CC2D1BQ5T0F9 858 aaKnown RBP17.25■□□□□ 0.35
CACNB1-212ENST00000622445 PLIN1O60240 522 aa17.25■□□□□ 0.35
CACNB1-212ENST00000622445 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
CACNB1-212ENST00000622445 CASKIN1Q8WXD9 1431 aa17.24■□□□□ 0.35
CACNB1-212ENST00000622445 DCAF11Q8TEB1 546 aa17.24■□□□□ 0.35
CACNB1-212ENST00000622445 CCDC7Q96M83 1385 aa17.23■□□□□ 0.35
CACNB1-212ENST00000622445 MYOM3Q5VTT5 1437 aa17.22■□□□□ 0.35
CACNB1-212ENST00000622445 POLA1P09884 1462 aaPredicted RBP17.21■□□□□ 0.35
CACNB1-212ENST00000622445 HFM1A2PYH4 1435 aa17.2■□□□□ 0.34
CACNB1-212ENST00000622445 PDS5BQ9NTI5 1447 aa17.19■□□□□ 0.34
CACNB1-212ENST00000622445 ST20-MTHFSA0A0A6YYL1 179 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms