RNA–Protein interactions for RNA: ENST00000621295.4

GDF9-205, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-205ENST00000621295 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
GDF9-205ENST00000621295 EIF4G3O43432 1585 aaKnown RBP17.72■□□□□ 0.43
GDF9-205ENST00000621295 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
GDF9-205ENST00000621295 EFCAB5A4FU69 1503 aa17.66■□□□□ 0.42
GDF9-205ENST00000621295 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
GDF9-205ENST00000621295 APLP2Q06481 763 aa17.63■□□□□ 0.41
GDF9-205ENST00000621295 SAMD9Q5K651 1589 aa17.63■□□□□ 0.41
GDF9-205ENST00000621295 PCF11O94913 1555 aaKnown RBP17.62■□□□□ 0.41
GDF9-205ENST00000621295 FHOD3Q2V2M9 1422 aa17.61■□□□□ 0.41
GDF9-205ENST00000621295 SNAPC4Q5SXM2 1469 aa17.6■□□□□ 0.41
GDF9-205ENST00000621295 P3H3Q8IVL6 736 aa17.59■□□□□ 0.41
GDF9-205ENST00000621295 TIAM1Q13009 1591 aa17.57■□□□□ 0.4
GDF9-205ENST00000621295 CFAP43Q8NDM7 1665 aa17.57■□□□□ 0.4
GDF9-205ENST00000621295 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
GDF9-205ENST00000621295 IQGAP2Q13576 1575 aa17.55■□□□□ 0.4
GDF9-205ENST00000621295 MAP3K1Q13233 1512 aa17.53■□□□□ 0.4
GDF9-205ENST00000621295 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.4
GDF9-205ENST00000621295 MAGI1Q96QZ7 1491 aaPredicted RBP17.51■□□□□ 0.39
GDF9-205ENST00000621295 GRIN2AQ12879 1464 aa17.51■□□□□ 0.39
GDF9-205ENST00000621295 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
GDF9-205ENST00000621295 CASKIN1Q8WXD9 1431 aa17.48■□□□□ 0.39
GDF9-205ENST00000621295 FMN1Q68DA7 1419 aa17.46■□□□□ 0.39
GDF9-205ENST00000621295 SYNJ2O15056 1496 aa17.46■□□□□ 0.39
GDF9-205ENST00000621295 CEP170Q5SW79 1584 aa17.45■□□□□ 0.38
GDF9-205ENST00000621295 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
GDF9-205ENST00000621295 LRRC9Q6ZRR7 1453 aa17.45■□□□□ 0.38
GDF9-205ENST00000621295 KIAA0586Q9BVV6 1533 aa17.43■□□□□ 0.38
GDF9-205ENST00000621295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.4■□□□□ 0.38
GDF9-205ENST00000621295 RRBP1Q9P2E9 1410 aaKnown RBP17.4■□□□□ 0.38
GDF9-205ENST00000621295 KIAA0556O60303 1618 aa17.39■□□□□ 0.38
GDF9-205ENST00000621295 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.37
GDF9-205ENST00000621295 HNRNPUL2Q1KMD3 747 aaKnown RBP17.38■□□□□ 0.37
GDF9-205ENST00000621295 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
GDF9-205ENST00000621295 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
GDF9-205ENST00000621295 CHD1O14646 1710 aa17.35■□□□□ 0.37
GDF9-205ENST00000621295 NUP160Q12769 1436 aa17.35■□□□□ 0.37
GDF9-205ENST00000621295 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
GDF9-205ENST00000621295 HECW1Q76N89 1606 aa17.34■□□□□ 0.37
GDF9-205ENST00000621295 FBLN2P98095 1184 aa17.33■□□□□ 0.36
GDF9-205ENST00000621295 PHLDB1Q86UU1 1377 aa17.32■□□□□ 0.36
GDF9-205ENST00000621295 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
GDF9-205ENST00000621295 CCER1Q8TC90 406 aaPredicted RBP17.3■□□□□ 0.36
GDF9-205ENST00000621295 MAGI3Q5TCQ9 1506 aa17.28■□□□□ 0.36
GDF9-205ENST00000621295 CCDC18Q5T9S5 1454 aa17.26■□□□□ 0.35
GDF9-205ENST00000621295 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
GDF9-205ENST00000621295 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
GDF9-205ENST00000621295 SUPT6HQ7KZ85 1726 aaKnown RBP17.25■□□□□ 0.35
GDF9-205ENST00000621295 EPRSP07814 1512 aaKnown RBP17.25■□□□□ 0.35
GDF9-205ENST00000621295 CDK13Q14004 1512 aaKnown RBP17.25■□□□□ 0.35
GDF9-205ENST00000621295 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
GDF9-205ENST00000621295 NCOA2Q15596 1464 aa17.2■□□□□ 0.34
GDF9-205ENST00000621295 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
GDF9-205ENST00000621295 NUP153P49790 1475 aaKnown RBP17.19■□□□□ 0.34
GDF9-205ENST00000621295 ARHGEF11O15085 1522 aa17.18■□□□□ 0.34
GDF9-205ENST00000621295 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
GDF9-205ENST00000621295 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
GDF9-205ENST00000621295 SHROOM2Q13796 1616 aa17.15■□□□□ 0.34
GDF9-205ENST00000621295 ITGAEP38570 1179 aa17.15■□□□□ 0.34
GDF9-205ENST00000621295 ARID3CA6NKF2 412 aa17.15■□□□□ 0.34
GDF9-205ENST00000621295 PLB1Q6P1J6 1458 aa17.15■□□□□ 0.34
GDF9-205ENST00000621295 FAM50AQ14320 339 aaKnown RBP17.13■□□□□ 0.33
GDF9-205ENST00000621295 MYOM3Q5VTT5 1437 aa17.13■□□□□ 0.33
GDF9-205ENST00000621295 ABCA8O94911 1581 aa17.11■□□□□ 0.33
GDF9-205ENST00000621295 PTPN23Q9H3S7 1636 aa17.11■□□□□ 0.33
GDF9-205ENST00000621295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.1■□□□□ 0.33
GDF9-205ENST00000621295 PRG4Q92954 1404 aaPredicted RBP17.1■□□□□ 0.33
GDF9-205ENST00000621295 DHX57Q6P158 1386 aaKnown RBP17.07■□□□□ 0.32
GDF9-205ENST00000621295 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
GDF9-205ENST00000621295 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
GDF9-205ENST00000621295 ADCY10Q96PN6 1610 aa17.04■□□□□ 0.32
GDF9-205ENST00000621295 RAB3GAP2Q9H2M9 1393 aa17.04■□□□□ 0.32
GDF9-205ENST00000621295 TCOF1Q13428 1488 aaKnown RBP17.03■□□□□ 0.32
GDF9-205ENST00000621295 SETD5Q9C0A6 1442 aa17.03■□□□□ 0.32
GDF9-205ENST00000621295 KIF14Q15058 1648 aa17.02■□□□□ 0.32
GDF9-205ENST00000621295 PTPRKQ15262 1439 aa17.02■□□□□ 0.32
GDF9-205ENST00000621295 TROQ12816 1431 aaPredicted RBP17■□□□□ 0.31
GDF9-205ENST00000621295 PTPRGP23470 1445 aa16.99■□□□□ 0.31
GDF9-205ENST00000621295 ATP10BO94823 1461 aa16.99■□□□□ 0.31
GDF9-205ENST00000621295 MIA2Q96PC5 1412 aa16.97■□□□□ 0.31
GDF9-205ENST00000621295 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
GDF9-205ENST00000621295 CDK11AQ9UQ88 783 aaPredicted RBP16.96■□□□□ 0.3
GDF9-205ENST00000621295 CDC42BPAQ5VT25 1732 aa16.94■□□□□ 0.3
GDF9-205ENST00000621295 GCC2Q8IWJ2 1684 aa16.94■□□□□ 0.3
GDF9-205ENST00000621295 MAPKBP1O60336 1514 aa16.93■□□□□ 0.3
GDF9-205ENST00000621295 CLSPNQ9HAW4 1339 aa16.93■□□□□ 0.3
GDF9-205ENST00000621295 HFM1A2PYH4 1435 aa16.91■□□□□ 0.3
GDF9-205ENST00000621295 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
GDF9-205ENST00000621295 DNMT1P26358 1616 aaKnown RBP16.91■□□□□ 0.3
GDF9-205ENST00000621295 ABCC2Q92887 1545 aa16.9■□□□□ 0.3
GDF9-205ENST00000621295 NAIPQ13075 1403 aa16.89■□□□□ 0.29
GDF9-205ENST00000621295 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
GDF9-205ENST00000621295 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
GDF9-205ENST00000621295 CAMSAP2Q08AD1 1489 aa16.86■□□□□ 0.29
GDF9-205ENST00000621295 KDM6BO15054 1643 aa16.86■□□□□ 0.29
GDF9-205ENST00000621295 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
GDF9-205ENST00000621295 CROCC2H7BZ55 1655 aa16.85■□□□□ 0.29
GDF9-205ENST00000621295 DAPK1P53355 1430 aa16.85■□□□□ 0.29
GDF9-205ENST00000621295 PLEKHD1A6NEE1 506 aa16.84■□□□□ 0.29
GDF9-205ENST00000621295 ZCCHC11Q5TAX3 1644 aaKnown RBP16.84■□□□□ 0.29
GDF9-205ENST00000621295 ABCC5O15440 1437 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms