RNA–Protein interactions for RNA: ENST00000620778.1

AC090340.1-201, humanhuman

BASIC

Gene AC090340.1, Length 4,980 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090340.1-201ENST00000620778 SUPT16HQ9Y5B9 1047 aaKnown RBP24.11■■□□□ 1.45
AC090340.1-201ENST00000620778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.1■■□□□ 1.45
AC090340.1-201ENST00000620778 DDRGK1Q96HY6 314 aa24.09■■□□□ 1.45
AC090340.1-201ENST00000620778 RRP7BPQ9NSQ0 103 aa24.06■■□□□ 1.44
AC090340.1-201ENST00000620778 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
AC090340.1-201ENST00000620778 TNIKQ9UKE5 1360 aa24.02■■□□□ 1.44
AC090340.1-201ENST00000620778 BECN1Q14457 450 aa24■■□□□ 1.43
AC090340.1-201ENST00000620778 STAG3Q9UJ98 1225 aa23.99■■□□□ 1.43
AC090340.1-201ENST00000620778 PPP4R2Q9NY27 417 aa23.96■■□□□ 1.43
AC090340.1-201ENST00000620778 PPM1GO15355 546 aaPredicted RBP23.92■■□□□ 1.42
AC090340.1-201ENST00000620778 ESF1Q9H501 851 aaKnown RBP23.92■■□□□ 1.42
AC090340.1-201ENST00000620778 SENP3-EIF4A1A0A087X0R7 540 aa23.89■■□□□ 1.42
AC090340.1-201ENST00000620778 SIN3AQ96ST3 1273 aa23.88■■□□□ 1.41
AC090340.1-201ENST00000620778 MYH16Q9H6N6 1097 aa23.88■■□□□ 1.41
AC090340.1-201ENST00000620778 WRNQ14191 1432 aaPredicted RBP eCLIP23.87■■□□□ 1.41
AC090340.1-201ENST00000620778 TRIM44Q96DX7 344 aaPredicted RBP23.86■■□□□ 1.41
AC090340.1-201ENST00000620778 CEP164Q9UPV0 1460 aa23.84■■□□□ 1.41
AC090340.1-201ENST00000620778 NOP58Q9Y2X3 529 aaKnown RBP23.83■■□□□ 1.41
AC090340.1-201ENST00000620778 GOLGA6L22H0YM25 854 aa23.79■■□□□ 1.4
AC090340.1-201ENST00000620778 ERICH6BQ5W0A0 696 aa23.78■■□□□ 1.4
AC090340.1-201ENST00000620778 NPM1P06748 294 aaKnown RBP eCLIP23.77■■□□□ 1.4
AC090340.1-201ENST00000620778 RGL3Q3MIN7 710 aa23.77■■□□□ 1.4
AC090340.1-201ENST00000620778 LAS1LQ9Y4W2 734 aaKnown RBP23.77■■□□□ 1.4
AC090340.1-201ENST00000620778 B4GALNT3Q6L9W6 998 aa23.77■■□□□ 1.39
AC090340.1-201ENST00000620778 CARD11Q9BXL7 1154 aa23.75■■□□□ 1.39
AC090340.1-201ENST00000620778 KNSTRNQ9Y448 316 aa23.74■■□□□ 1.39
AC090340.1-201ENST00000620778 CDCA8Q53HL2 280 aa23.71■■□□□ 1.39
AC090340.1-201ENST00000620778 TIMELESSQ9UNS1 1208 aa23.7■■□□□ 1.38
AC090340.1-201ENST00000620778 RBM19Q9Y4C8 960 aaKnown RBP23.7■■□□□ 1.38
AC090340.1-201ENST00000620778 KIF27Q86VH2 1401 aa23.7■■□□□ 1.38
AC090340.1-201ENST00000620778 CCER2I3L3R5 266 aa23.7■■□□□ 1.38
AC090340.1-201ENST00000620778 NCLP19338 710 aaKnown RBP23.69■■□□□ 1.38
AC090340.1-201ENST00000620778 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
AC090340.1-201ENST00000620778 CCNB3Q8WWL7 1395 aa23.68■■□□□ 1.38
AC090340.1-201ENST00000620778 RTN4Q9NQC3 1192 aaKnown RBP23.68■■□□□ 1.38
AC090340.1-201ENST00000620778 PLEKHD1A6NEE1 506 aa23.67■■□□□ 1.38
AC090340.1-201ENST00000620778 RGS3P49796 1198 aa23.67■■□□□ 1.38
AC090340.1-201ENST00000620778 CFAP53Q96M91 514 aa23.67■■□□□ 1.38
AC090340.1-201ENST00000620778 CFDP1Q9UEE9 299 aaPredicted RBP23.65■■□□□ 1.38
AC090340.1-201ENST00000620778 FTSJ3Q8IY81 847 aaKnown RBP23.61■■□□□ 1.37
AC090340.1-201ENST00000620778 DEKP35659 375 aaKnown RBP23.57■■□□□ 1.36
AC090340.1-201ENST00000620778 NEUROD2Q15784 382 aa23.57■■□□□ 1.36
AC090340.1-201ENST00000620778 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
AC090340.1-201ENST00000620778 PTMAP06454 111 aaKnown RBP23.56■■□□□ 1.36
AC090340.1-201ENST00000620778 NAP1L5Q96NT1 182 aaPredicted RBP23.54■■□□□ 1.36
AC090340.1-201ENST00000620778 PLPPR3Q6T4P5 718 aa23.53■■□□□ 1.36
AC090340.1-201ENST00000620778 FRAT1Q92837 279 aaPredicted RBP23.52■■□□□ 1.36
AC090340.1-201ENST00000620778 KCNH8Q96L42 1107 aa23.52■■□□□ 1.36
AC090340.1-201ENST00000620778 SOGA1O94964 1423 aa23.49■■□□□ 1.35
AC090340.1-201ENST00000620778 CASC1Q6TDU7 716 aa23.49■■□□□ 1.35
AC090340.1-201ENST00000620778 TNNT2P45379 298 aaPredicted RBP23.48■■□□□ 1.35
AC090340.1-201ENST00000620778 CC2D1BQ5T0F9 858 aaKnown RBP23.48■■□□□ 1.35
AC090340.1-201ENST00000620778 DNTTIP2Q5QJE6 756 aaKnown RBP23.48■■□□□ 1.35
AC090340.1-201ENST00000620778 TSHZ2Q9NRE2 1034 aa23.47■■□□□ 1.35
AC090340.1-201ENST00000620778 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
AC090340.1-201ENST00000620778 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
AC090340.1-201ENST00000620778 BAZ1BQ9UIG0 1483 aaKnown RBP23.46■■□□□ 1.35
AC090340.1-201ENST00000620778 VPS8Q8N3P4 1428 aa23.45■■□□□ 1.35
AC090340.1-201ENST00000620778 MAPK8IP3Q9UPT6 1336 aa23.45■■□□□ 1.34
AC090340.1-201ENST00000620778 SETD5Q9C0A6 1442 aa23.45■■□□□ 1.34
AC090340.1-201ENST00000620778 NUDCQ9Y266 331 aa23.44■■□□□ 1.34
AC090340.1-201ENST00000620778 HSPA5P11021 654 aaKnown RBP23.44■■□□□ 1.34
AC090340.1-201ENST00000620778 MS4A1P11836 297 aa23.42■■□□□ 1.34
AC090340.1-201ENST00000620778 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
AC090340.1-201ENST00000620778 HSP90AB1P08238 724 aaKnown RBP23.39■■□□□ 1.34
AC090340.1-201ENST00000620778 CHMP4BQ9H444 224 aaKnown RBP23.38■■□□□ 1.33
AC090340.1-201ENST00000620778 DCAF11Q8TEB1 546 aa23.38■■□□□ 1.33
AC090340.1-201ENST00000620778 TMF1P82094 1093 aa23.37■■□□□ 1.33
AC090340.1-201ENST00000620778 ZRSR1Q15695 479 aaKnown RBP23.36■■□□□ 1.33
AC090340.1-201ENST00000620778 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
AC090340.1-201ENST00000620778 BAZ1AQ9NRL2 1556 aaPredicted RBP23.34■■□□□ 1.33
AC090340.1-201ENST00000620778 L1TD1Q5T7N2 865 aaKnown RBP23.34■■□□□ 1.33
AC090340.1-201ENST00000620778 TPRNQ4KMQ1 711 aa23.34■■□□□ 1.33
AC090340.1-201ENST00000620778 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
AC090340.1-201ENST00000620778 HSCBQ8IWL3 235 aa23.31■■□□□ 1.32
AC090340.1-201ENST00000620778 NACADO15069 1562 aa23.31■■□□□ 1.32
AC090340.1-201ENST00000620778 C14orf37Q86TY3 774 aa23.3■■□□□ 1.32
AC090340.1-201ENST00000620778 CARMIL1Q5VZK9 1371 aa23.3■■□□□ 1.32
AC090340.1-201ENST00000620778 RAB3GAP2Q9H2M9 1393 aa23.29■■□□□ 1.32
AC090340.1-201ENST00000620778 PLCB2Q00722 1185 aa23.29■■□□□ 1.32
AC090340.1-201ENST00000620778 ZBTB7CA1YPR0 619 aa23.29■■□□□ 1.32
AC090340.1-201ENST00000620778 TCERG1O14776 1098 aaKnown RBP23.29■■□□□ 1.32
AC090340.1-201ENST00000620778 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
AC090340.1-201ENST00000620778 RCAN3Q9UKA8 241 aa23.27■■□□□ 1.32
AC090340.1-201ENST00000620778 CDK11BP21127 795 aaKnown RBP23.26■■□□□ 1.31
AC090340.1-201ENST00000620778 ARHGAP35Q9NRY4 1499 aa23.22■■□□□ 1.31
AC090340.1-201ENST00000620778 PLEKHG5O94827 1062 aa23.22■■□□□ 1.31
AC090340.1-201ENST00000620778 POGKQ9P215 609 aa23.22■■□□□ 1.31
AC090340.1-201ENST00000620778 KTN1Q86UP2 1357 aaKnown RBP23.21■■□□□ 1.31
AC090340.1-201ENST00000620778 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.31
AC090340.1-201ENST00000620778 SPRYD3Q8NCJ5 442 aa23.2■■□□□ 1.3
AC090340.1-201ENST00000620778 CUX2O14529 1486 aa23.19■■□□□ 1.3
AC090340.1-201ENST00000620778 IPO9Q96P70 1041 aaKnown RBP23.19■■□□□ 1.3
AC090340.1-201ENST00000620778 MSNP26038 577 aaKnown RBP23.18■■□□□ 1.3
AC090340.1-201ENST00000620778 FOXD1Q16676 465 aa23.18■■□□□ 1.3
AC090340.1-201ENST00000620778 PKD2Q13563 968 aa23.17■■□□□ 1.3
AC090340.1-201ENST00000620778 RALBP1Q15311 655 aa23.17■■□□□ 1.3
AC090340.1-201ENST00000620778 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
AC090340.1-201ENST00000620778 MORC1Q86VD1 984 aa23.14■■□□□ 1.3
AC090340.1-201ENST00000620778 MPHOSPH9Q99550 1183 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms