RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 HDAC5Q9UQL6 1122 aa9.49□□□□□ -0.89
CSMD2-210ENST00000619121 WDR43Q15061 677 aaKnown RBP eCLIP9.48□□□□□ -0.89
CSMD2-210ENST00000619121 NCLP19338 710 aaKnown RBP9.48□□□□□ -0.89
CSMD2-210ENST00000619121 ABCC8Q09428 1581 aa9.48□□□□□ -0.89
CSMD2-210ENST00000619121 BECN1Q14457 450 aa9.48□□□□□ -0.89
CSMD2-210ENST00000619121 KANK1Q14678 1352 aa9.48□□□□□ -0.89
CSMD2-210ENST00000619121 GOLGA6L6A8MZA4 724 aa9.47□□□□□ -0.89
CSMD2-210ENST00000619121 ZRSR1Q15695 479 aaKnown RBP9.47□□□□□ -0.89
CSMD2-210ENST00000619121 CFAP53Q96M91 514 aa9.47□□□□□ -0.89
CSMD2-210ENST00000619121 MTUS2Q5JR59 1369 aa9.46□□□□□ -0.9
CSMD2-210ENST00000619121 FOXD1Q16676 465 aa9.45□□□□□ -0.9
CSMD2-210ENST00000619121 DDRGK1Q96HY6 314 aa9.45□□□□□ -0.9
CSMD2-210ENST00000619121 ERCC6Q03468 1493 aa9.45□□□□□ -0.9
CSMD2-210ENST00000619121 BAZ1BQ9UIG0 1483 aaKnown RBP9.45□□□□□ -0.9
CSMD2-210ENST00000619121 KAT6BQ8WYB5 2073 aa9.44□□□□□ -0.9
CSMD2-210ENST00000619121 KIF27Q86VH2 1401 aa9.43□□□□□ -0.9
CSMD2-210ENST00000619121 TMX4Q9H1E5 349 aaPredicted RBP9.43□□□□□ -0.9
CSMD2-210ENST00000619121 PLEKHD1A6NEE1 506 aa9.42□□□□□ -0.9
CSMD2-210ENST00000619121 CHMP4CQ96CF2 233 aa9.42□□□□□ -0.9
CSMD2-210ENST00000619121 TMC1Q8TDI8 760 aa9.41□□□□□ -0.9
CSMD2-210ENST00000619121 CCDC34Q96HJ3 373 aa9.41□□□□□ -0.9
CSMD2-210ENST00000619121 NUDCQ9Y266 331 aa9.41□□□□□ -0.9
CSMD2-210ENST00000619121 PTMSP20962 102 aa9.41□□□□□ -0.9
CSMD2-210ENST00000619121 TIMELESSQ9UNS1 1208 aa9.41□□□□□ -0.9
CSMD2-210ENST00000619121 GOLGA3Q08378 1498 aa9.4□□□□□ -0.9
CSMD2-210ENST00000619121 WWC1Q8IX03 1113 aa9.4□□□□□ -0.9
CSMD2-210ENST00000619121 TRIM44Q96DX7 344 aaPredicted RBP9.4□□□□□ -0.91
CSMD2-210ENST00000619121 CALD1Q05682 793 aaKnown RBP9.39□□□□□ -0.91
CSMD2-210ENST00000619121 PABPN1Q86U42 306 aaKnown RBP eCLIP9.38□□□□□ -0.91
CSMD2-210ENST00000619121 RSPH4AQ5TD94 716 aa9.38□□□□□ -0.91
CSMD2-210ENST00000619121 TNNT2P45379 298 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-210ENST00000619121 CARMIL2Q6F5E8 1435 aa9.38□□□□□ -0.91
CSMD2-210ENST00000619121 CEP164Q9UPV0 1460 aa9.37□□□□□ -0.91
CSMD2-210ENST00000619121 PDS5BQ9NTI5 1447 aa9.36□□□□□ -0.91
CSMD2-210ENST00000619121 PPP1R15AO75807 674 aaPredicted RBP9.35□□□□□ -0.91
CSMD2-210ENST00000619121 PPARGC1BQ86YN6 1023 aaKnown RBP9.34□□□□□ -0.91
CSMD2-210ENST00000619121 ZNF777Q9ULD5 760 aaPredicted RBP9.34□□□□□ -0.91
CSMD2-210ENST00000619121 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
CSMD2-210ENST00000619121 WRNQ14191 1432 aaPredicted RBP eCLIP9.32□□□□□ -0.92
CSMD2-210ENST00000619121 GOLGA2Q08379 1002 aa9.32□□□□□ -0.92
CSMD2-210ENST00000619121 ZNF326Q5BKZ1 582 aaKnown RBP9.32□□□□□ -0.92
CSMD2-210ENST00000619121 NPHP1O15259 732 aa9.31□□□□□ -0.92
CSMD2-210ENST00000619121 CHGAP10645 457 aaKnown RBP9.31□□□□□ -0.92
CSMD2-210ENST00000619121 EIF3AQ14152 1382 aaKnown RBP9.3□□□□□ -0.92
CSMD2-210ENST00000619121 CHAF1AQ13111 956 aaPredicted RBP9.3□□□□□ -0.92
CSMD2-210ENST00000619121 MCCP23508 829 aa9.3□□□□□ -0.92
CSMD2-210ENST00000619121 HTATSF1O43719 755 aaKnown RBP9.29□□□□□ -0.92
CSMD2-210ENST00000619121 WASHC2AQ641Q2 1341 aa9.29□□□□□ -0.92
CSMD2-210ENST00000619121 UACAQ9BZF9 1416 aa9.29□□□□□ -0.92
CSMD2-210ENST00000619121 KNSTRNQ9Y448 316 aa9.28□□□□□ -0.92
CSMD2-210ENST00000619121 KIAA2012Q0VF49 1180 aa9.27□□□□□ -0.93
CSMD2-210ENST00000619121 SETD5Q9C0A6 1442 aa9.27□□□□□ -0.93
CSMD2-210ENST00000619121 FMN1Q68DA7 1419 aa9.26□□□□□ -0.93
CSMD2-210ENST00000619121 STAC3Q96MF2 364 aa9.26□□□□□ -0.93
CSMD2-210ENST00000619121 MAPK8IP3Q9UPT6 1336 aa9.25□□□□□ -0.93
CSMD2-210ENST00000619121 LRRFIP1Q32MZ4 808 aaKnown RBP9.24□□□□□ -0.93
CSMD2-210ENST00000619121 PHLDB1Q86UU1 1377 aa9.24□□□□□ -0.93
CSMD2-210ENST00000619121 CSPP1Q1MSJ5 1256 aa9.22□□□□□ -0.93
CSMD2-210ENST00000619121 CCDC136Q96JN2 1154 aa9.22□□□□□ -0.93
CSMD2-210ENST00000619121 KIF3AQ9Y496 699 aa9.21□□□□□ -0.93
CSMD2-210ENST00000619121 FTSJ3Q8IY81 847 aaKnown RBP9.21□□□□□ -0.93
CSMD2-210ENST00000619121 GPATCH3Q96I76 525 aa9.21□□□□□ -0.93
CSMD2-210ENST00000619121 DCAF8L1A6NGE4 600 aa9.21□□□□□ -0.94
CSMD2-210ENST00000619121 ERICH6BQ5W0A0 696 aa9.2□□□□□ -0.94
CSMD2-210ENST00000619121 IPO8O15397 1037 aaKnown RBP9.2□□□□□ -0.94
CSMD2-210ENST00000619121 TPM4P67936 248 aa9.18□□□□□ -0.94
CSMD2-210ENST00000619121 CFDP1Q9UEE9 299 aaPredicted RBP9.18□□□□□ -0.94
CSMD2-210ENST00000619121 LMOD3Q0VAK6 560 aa9.18□□□□□ -0.94
CSMD2-210ENST00000619121 CCDC18Q5T9S5 1454 aa9.18□□□□□ -0.94
CSMD2-210ENST00000619121 TMF1P82094 1093 aa9.17□□□□□ -0.94
CSMD2-210ENST00000619121 HSP90B1P14625 803 aaKnown RBP9.17□□□□□ -0.94
CSMD2-210ENST00000619121 NGEFQ8N5V2 710 aa9.17□□□□□ -0.94
CSMD2-210ENST00000619121 SPAG9O60271 1321 aaKnown RBP9.16□□□□□ -0.94
CSMD2-210ENST00000619121 SCAPERQ9BY12 1400 aa9.16□□□□□ -0.94
CSMD2-210ENST00000619121 EID1Q9Y6B2 187 aa9.16□□□□□ -0.94
CSMD2-210ENST00000619121 ROCK2O75116 1388 aaKnown RBP9.16□□□□□ -0.94
CSMD2-210ENST00000619121 RTF1Q92541 710 aaKnown RBP9.15□□□□□ -0.94
CSMD2-210ENST00000619121 CCNB3Q8WWL7 1395 aa9.15□□□□□ -0.94
CSMD2-210ENST00000619121 SYAP1Q96A49 352 aaPredicted RBP9.15□□□□□ -0.95
CSMD2-210ENST00000619121 POGKQ9P215 609 aa9.15□□□□□ -0.95
CSMD2-210ENST00000619121 PPM1GO15355 546 aaPredicted RBP9.15□□□□□ -0.95
CSMD2-210ENST00000619121 PLPPR3Q6T4P5 718 aa9.14□□□□□ -0.95
CSMD2-210ENST00000619121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.14□□□□□ -0.95
CSMD2-210ENST00000619121 TNIKQ9UKE5 1360 aa9.13□□□□□ -0.95
CSMD2-210ENST00000619121 SMC4Q9NTJ3 1288 aa9.13□□□□□ -0.95
CSMD2-210ENST00000619121 LOC105371045A0A1W2PR82 267 aa9.13□□□□□ -0.95
CSMD2-210ENST00000619121 HDGFL2Q7Z4V5 671 aaPredicted RBP9.12□□□□□ -0.95
CSMD2-210ENST00000619121 ARHGAP35Q9NRY4 1499 aa9.12□□□□□ -0.95
CSMD2-210ENST00000619121 HNRNPUQ00839 825 aaKnown RBP eCLIP9.12□□□□□ -0.95
CSMD2-210ENST00000619121 FGD1P98174 961 aa9.12□□□□□ -0.95
CSMD2-210ENST00000619121 CNGB1Q14028 1251 aaPredicted RBP9.12□□□□□ -0.95
CSMD2-210ENST00000619121 PHF14O94880 888 aa9.11□□□□□ -0.95
CSMD2-210ENST00000619121 KIAA1211Q6ZU35 1233 aa9.11□□□□□ -0.95
CSMD2-210ENST00000619121 HMGB1P09429 215 aaKnown RBP9.09□□□□□ -0.95
CSMD2-210ENST00000619121 GOLGA6L4A6NEF3 574 aa9.09□□□□□ -0.95
CSMD2-210ENST00000619121 MRS2Q9HD23 443 aa9.09□□□□□ -0.95
CSMD2-210ENST00000619121 AMOTL1Q8IY63 956 aa9.09□□□□□ -0.95
CSMD2-210ENST00000619121 A0A0U1RQG5 324 aaPredicted RBP9.08□□□□□ -0.96
CSMD2-210ENST00000619121 OS9Q13438 667 aaPredicted RBP9.08□□□□□ -0.96
CSMD2-210ENST00000619121 KCNJ4P48050 445 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms