RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 NRDCO43847 1150 aa15.03■□□□□ -0
PCDHA4-204ENST00000618834 ARID3CA6NKF2 412 aa15.02■□□□□ -0
PCDHA4-204ENST00000618834 STAG3Q9UJ98 1225 aa15.02■□□□□ -0
PCDHA4-204ENST00000618834 FBLN2P98095 1184 aa15.01□□□□□ -0.01
PCDHA4-204ENST00000618834 ESF1Q9H501 851 aaKnown RBP15.01□□□□□ -0.01
PCDHA4-204ENST00000618834 MIER1Q8N108 512 aa15□□□□□ -0.01
PCDHA4-204ENST00000618834 MSNP26038 577 aaKnown RBP14.99□□□□□ -0.01
PCDHA4-204ENST00000618834 L1TD1Q5T7N2 865 aaKnown RBP14.98□□□□□ -0.01
PCDHA4-204ENST00000618834 P3H3Q8IVL6 736 aa14.97□□□□□ -0.01
PCDHA4-204ENST00000618834 FTSJ3Q8IY81 847 aaKnown RBP14.96□□□□□ -0.01
PCDHA4-204ENST00000618834 CHGAP10645 457 aaKnown RBP14.95□□□□□ -0.02
PCDHA4-204ENST00000618834 HSP90AB1P08238 724 aaKnown RBP14.94□□□□□ -0.02
PCDHA4-204ENST00000618834 PLCB2Q00722 1185 aa14.93□□□□□ -0.02
PCDHA4-204ENST00000618834 DEKP35659 375 aaKnown RBP14.92□□□□□ -0.02
PCDHA4-204ENST00000618834 TULP1O00294 542 aaPredicted RBP14.91□□□□□ -0.02
PCDHA4-204ENST00000618834 DRC7Q8IY82 874 aa14.87□□□□□ -0.03
PCDHA4-204ENST00000618834 ARID4BQ4LE39 1312 aaPredicted RBP14.86□□□□□ -0.03
PCDHA4-204ENST00000618834 HSCBQ8IWL3 235 aa14.85□□□□□ -0.03
PCDHA4-204ENST00000618834 TNNT3P45378 269 aaPredicted RBP14.85□□□□□ -0.03
PCDHA4-204ENST00000618834 PPP4R2Q9NY27 417 aa14.84□□□□□ -0.03
PCDHA4-204ENST00000618834 SUPT16HQ9Y5B9 1047 aaKnown RBP14.83□□□□□ -0.04
PCDHA4-204ENST00000618834 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
PCDHA4-204ENST00000618834 KDM2AQ9Y2K7 1162 aa14.82□□□□□ -0.04
PCDHA4-204ENST00000618834 A0A0G2JS52 829 aa14.81□□□□□ -0.04
PCDHA4-204ENST00000618834 GOLGA6L4A6NEF3 574 aa14.81□□□□□ -0.04
PCDHA4-204ENST00000618834 EIF4G2P78344 907 aaKnown RBP eCLIP14.81□□□□□ -0.04
PCDHA4-204ENST00000618834 RGS3P49796 1198 aa14.81□□□□□ -0.04
PCDHA4-204ENST00000618834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
PCDHA4-204ENST00000618834 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.8□□□□□ -0.04
PCDHA4-204ENST00000618834 FGD1P98174 961 aa14.8□□□□□ -0.04
PCDHA4-204ENST00000618834 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
PCDHA4-204ENST00000618834 NOC3LQ8WTT2 800 aaKnown RBP14.79□□□□□ -0.04
PCDHA4-204ENST00000618834 ARID3AQ99856 593 aa14.79□□□□□ -0.04
PCDHA4-204ENST00000618834 PTMSP20962 102 aa14.78□□□□□ -0.04
PCDHA4-204ENST00000618834 CFAP53Q96M91 514 aa14.78□□□□□ -0.04
PCDHA4-204ENST00000618834 KIAA2012Q0VF49 1180 aa14.77□□□□□ -0.04
PCDHA4-204ENST00000618834 CHMP4BQ9H444 224 aaKnown RBP14.76□□□□□ -0.05
PCDHA4-204ENST00000618834 HIRIP3Q9BW71 556 aaPredicted RBP14.76□□□□□ -0.05
PCDHA4-204ENST00000618834 PLPPR3Q6T4P5 718 aa14.75□□□□□ -0.05
PCDHA4-204ENST00000618834 KCNJ4P48050 445 aa14.75□□□□□ -0.05
PCDHA4-204ENST00000618834 TAOK2Q9UL54 1235 aa14.74□□□□□ -0.05
PCDHA4-204ENST00000618834 CHIC2Q9UKJ5 165 aa14.74□□□□□ -0.05
PCDHA4-204ENST00000618834 NAP1L2Q9ULW6 460 aaPredicted RBP14.73□□□□□ -0.05
PCDHA4-204ENST00000618834 GOLGA6L1Q8N7Z2 621 aa14.73□□□□□ -0.05
PCDHA4-204ENST00000618834 PNNQ9H307 717 aaKnown RBP14.72□□□□□ -0.05
PCDHA4-204ENST00000618834 KNSTRNQ9Y448 316 aa14.72□□□□□ -0.05
PCDHA4-204ENST00000618834 MCCP23508 829 aa14.71□□□□□ -0.05
PCDHA4-204ENST00000618834 ZBTB7CA1YPR0 619 aa14.71□□□□□ -0.05
PCDHA4-204ENST00000618834 CLSTN1O94985 981 aa14.71□□□□□ -0.05
PCDHA4-204ENST00000618834 OS9Q13438 667 aaPredicted RBP14.7□□□□□ -0.06
PCDHA4-204ENST00000618834 MS4A1P11836 297 aa14.7□□□□□ -0.06
PCDHA4-204ENST00000618834 C14orf37Q86TY3 774 aa14.7□□□□□ -0.06
PCDHA4-204ENST00000618834 GBP4Q96PP9 640 aa14.69□□□□□ -0.06
PCDHA4-204ENST00000618834 PABPN1Q86U42 306 aaKnown RBP eCLIP14.69□□□□□ -0.06
PCDHA4-204ENST00000618834 MTUS2Q5JR59 1369 aa14.69□□□□□ -0.06
PCDHA4-204ENST00000618834 SPRYD3Q8NCJ5 442 aa14.67□□□□□ -0.06
PCDHA4-204ENST00000618834 CDCA8Q53HL2 280 aa14.67□□□□□ -0.06
PCDHA4-204ENST00000618834 SETQ01105 290 aaPredicted RBP14.67□□□□□ -0.06
PCDHA4-204ENST00000618834 MAPK8IP3Q9UPT6 1336 aa14.66□□□□□ -0.06
PCDHA4-204ENST00000618834 SYAP1Q96A49 352 aaPredicted RBP14.66□□□□□ -0.06
PCDHA4-204ENST00000618834 GNL2Q13823 731 aaKnown RBP14.65□□□□□ -0.06
PCDHA4-204ENST00000618834 FRAT1Q92837 279 aaPredicted RBP14.65□□□□□ -0.06
PCDHA4-204ENST00000618834 B4GALNT3Q6L9W6 998 aa14.65□□□□□ -0.06
PCDHA4-204ENST00000618834 USP35Q9P2H5 1018 aa14.64□□□□□ -0.07
PCDHA4-204ENST00000618834 ABCC9O60706 1549 aa14.64□□□□□ -0.07
PCDHA4-204ENST00000618834 CLIP1P30622 1438 aa14.64□□□□□ -0.07
PCDHA4-204ENST00000618834 CFAP44Q96MT7 982 aa14.63□□□□□ -0.07
PCDHA4-204ENST00000618834 SENP3-EIF4A1A0A087X0R7 540 aa14.63□□□□□ -0.07
PCDHA4-204ENST00000618834 HSP90AA2PQ14568 343 aaPredicted RBP14.62□□□□□ -0.07
PCDHA4-204ENST00000618834 A0A0U1RQG5 324 aaPredicted RBP14.61□□□□□ -0.07
PCDHA4-204ENST00000618834 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
PCDHA4-204ENST00000618834 RSPH6AQ9H0K4 717 aa14.61□□□□□ -0.07
PCDHA4-204ENST00000618834 CALRP27797 417 aaKnown RBP14.6□□□□□ -0.07
PCDHA4-204ENST00000618834 GZF1Q9H116 711 aaPredicted RBP14.6□□□□□ -0.07
PCDHA4-204ENST00000618834 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
PCDHA4-204ENST00000618834 RBM19Q9Y4C8 960 aaKnown RBP14.6□□□□□ -0.07
PCDHA4-204ENST00000618834 PPP1R15AO75807 674 aaPredicted RBP14.6□□□□□ -0.07
PCDHA4-204ENST00000618834 TSPY4P0CV99 314 aa14.59□□□□□ -0.07
PCDHA4-204ENST00000618834 TSPY10P0CW01 314 aa14.59□□□□□ -0.07
PCDHA4-204ENST00000618834 GOLGA6L3A6NEY3 463 aa14.59□□□□□ -0.07
PCDHA4-204ENST00000618834 TPM4P67936 248 aa14.58□□□□□ -0.08
PCDHA4-204ENST00000618834 PLEKHG5O94827 1062 aa14.58□□□□□ -0.08
PCDHA4-204ENST00000618834 NEUROD2Q15784 382 aa14.56□□□□□ -0.08
PCDHA4-204ENST00000618834 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
PCDHA4-204ENST00000618834 PHF14O94880 888 aa14.55□□□□□ -0.08
PCDHA4-204ENST00000618834 HTATSF1O43719 755 aaKnown RBP14.55□□□□□ -0.08
PCDHA4-204ENST00000618834 NUDCQ9Y266 331 aa14.55□□□□□ -0.08
PCDHA4-204ENST00000618834 RRP7BPQ9NSQ0 103 aa14.55□□□□□ -0.08
PCDHA4-204ENST00000618834 NPHP1O15259 732 aa14.54□□□□□ -0.08
PCDHA4-204ENST00000618834 KIAA1211Q6ZU35 1233 aa14.54□□□□□ -0.08
PCDHA4-204ENST00000618834 NPM1P06748 294 aaKnown RBP eCLIP14.53□□□□□ -0.08
PCDHA4-204ENST00000618834 ZCCHC6Q5VYS8 1495 aaKnown RBP14.53□□□□□ -0.08
PCDHA4-204ENST00000618834 SENP3Q9H4L4 574 aaPredicted RBP14.52□□□□□ -0.09
PCDHA4-204ENST00000618834 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
PCDHA4-204ENST00000618834 SLKQ9H2G2 1235 aaPredicted RBP14.5□□□□□ -0.09
PCDHA4-204ENST00000618834 CSPP1Q1MSJ5 1256 aa14.49□□□□□ -0.09
PCDHA4-204ENST00000618834 CARD11Q9BXL7 1154 aa14.49□□□□□ -0.09
PCDHA4-204ENST00000618834 HAP1P54257 671 aaPredicted RBP14.48□□□□□ -0.09
PCDHA4-204ENST00000618834 CC2D1BQ5T0F9 858 aaKnown RBP14.48□□□□□ -0.09
PCDHA4-204ENST00000618834 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms