RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 EIF4G1Q04637 1599 aaKnown RBP7.02□□□□□ -1.29
SEC22B-202ENST00000618538 TRIM41Q8WV44 630 aa7□□□□□ -1.29
SEC22B-202ENST00000618538 BAZ1AQ9NRL2 1556 aaPredicted RBP7□□□□□ -1.29
SEC22B-202ENST00000618538 POTEMA6NI47 508 aa6.99□□□□□ -1.29
SEC22B-202ENST00000618538 FAM9AQ8IZU1 332 aaPredicted RBP6.98□□□□□ -1.29
SEC22B-202ENST00000618538 TRIM26Q12899 539 aaPredicted RBP6.96□□□□□ -1.29
SEC22B-202ENST00000618538 UNC13AQ9UPW8 1703 aa6.96□□□□□ -1.3
SEC22B-202ENST00000618538 POTEGQ6S5H5 508 aa6.96□□□□□ -1.3
SEC22B-202ENST00000618538 MKRN4PQ13434 485 aaPredicted RBP6.95□□□□□ -1.3
SEC22B-202ENST00000618538 PABPN1Q86U42 306 aaKnown RBP eCLIP6.95□□□□□ -1.3
SEC22B-202ENST00000618538 OTUD5Q96G74 571 aa6.95□□□□□ -1.3
SEC22B-202ENST00000618538 MAMSTRQ6ZN01 415 aa6.95□□□□□ -1.3
SEC22B-202ENST00000618538 SMARCA4P51532 1647 aa6.93□□□□□ -1.3
SEC22B-202ENST00000618538 EHMT2Q96KQ7 1210 aa6.93□□□□□ -1.3
SEC22B-202ENST00000618538 TOP2AP11388 1531 aaKnown RBP6.92□□□□□ -1.3
SEC22B-202ENST00000618538 ZRANB1Q9UGI0 708 aa6.91□□□□□ -1.3
SEC22B-202ENST00000618538 SMARCA2P51531 1590 aa6.9□□□□□ -1.3
SEC22B-202ENST00000618538 ABCC8Q09428 1581 aa6.9□□□□□ -1.3
SEC22B-202ENST00000618538 PAK3O75914 559 aaPredicted RBP6.89□□□□□ -1.31
SEC22B-202ENST00000618538 CCDC88BA6NC98 1476 aa6.89□□□□□ -1.31
SEC22B-202ENST00000618538 STAG3Q9UJ98 1225 aa6.88□□□□□ -1.31
SEC22B-202ENST00000618538 BICRAQ9NZM4 1560 aa6.87□□□□□ -1.31
SEC22B-202ENST00000618538 C7P10643 843 aa6.84□□□□□ -1.32
SEC22B-202ENST00000618538 SLC39A7Q92504 469 aa6.84□□□□□ -1.32
SEC22B-202ENST00000618538 SOGA1O94964 1423 aa6.82□□□□□ -1.32
SEC22B-202ENST00000618538 GALR2O43603 387 aaPredicted RBP6.81□□□□□ -1.32
SEC22B-202ENST00000618538 RUSC2Q8N2Y8 1516 aa6.81□□□□□ -1.32
SEC22B-202ENST00000618538 PEG3Q9GZU2 1588 aa6.8□□□□□ -1.32
SEC22B-202ENST00000618538 POTEB2H3BUK9 544 aa6.8□□□□□ -1.32
SEC22B-202ENST00000618538 ZBTB22O15209 634 aa6.8□□□□□ -1.32
SEC22B-202ENST00000618538 NPM1P06748 294 aaKnown RBP eCLIP6.8□□□□□ -1.32
SEC22B-202ENST00000618538 SCUBE2Q9NQ36 999 aa6.79□□□□□ -1.32
SEC22B-202ENST00000618538 ASTLQ6HA08 431 aaPredicted RBP6.77□□□□□ -1.33
SEC22B-202ENST00000618538 CREBZFQ9NS37 354 aa6.77□□□□□ -1.33
SEC22B-202ENST00000618538 CEP162Q5TB80 1403 aa6.77□□□□□ -1.33
SEC22B-202ENST00000618538 WRNQ14191 1432 aaPredicted RBP eCLIP6.76□□□□□ -1.33
SEC22B-202ENST00000618538 SYNJ1O43426 1573 aa6.76□□□□□ -1.33
SEC22B-202ENST00000618538 ZEB1P37275 1124 aaPredicted RBP6.76□□□□□ -1.33
SEC22B-202ENST00000618538 METRNQ9UJH8 293 aa6.76□□□□□ -1.33
SEC22B-202ENST00000618538 TNIKQ9UKE5 1360 aa6.74□□□□□ -1.33
SEC22B-202ENST00000618538 ATAD2BQ9ULI0 1458 aa6.74□□□□□ -1.33
SEC22B-202ENST00000618538 EEA1Q15075 1411 aa6.71□□□□□ -1.34
SEC22B-202ENST00000618538 TTBK1Q5TCY1 1321 aaPredicted RBP6.71□□□□□ -1.34
SEC22B-202ENST00000618538 CSRNP3Q8WYN3 585 aa6.71□□□□□ -1.34
SEC22B-202ENST00000618538 ATMINO43313 823 aaPredicted RBP6.7□□□□□ -1.34
SEC22B-202ENST00000618538 GOLGA3Q08378 1498 aa6.7□□□□□ -1.34
SEC22B-202ENST00000618538 PELP1Q8IZL8 1130 aaKnown RBP6.69□□□□□ -1.34
SEC22B-202ENST00000618538 FAM163AQ96GL9 167 aaPredicted RBP6.69□□□□□ -1.34
SEC22B-202ENST00000618538 BAZ1BQ9UIG0 1483 aaKnown RBP6.69□□□□□ -1.34
SEC22B-202ENST00000618538 PHF12Q96QT6 1004 aa6.69□□□□□ -1.34
SEC22B-202ENST00000618538 KIF21BO75037 1637 aa6.68□□□□□ -1.34
SEC22B-202ENST00000618538 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
SEC22B-202ENST00000618538 CEP164Q9UPV0 1460 aa6.66□□□□□ -1.34
SEC22B-202ENST00000618538 RAPGEF2Q9Y4G8 1499 aa6.66□□□□□ -1.34
SEC22B-202ENST00000618538 UBTFP17480 764 aaKnown RBP6.65□□□□□ -1.34
SEC22B-202ENST00000618538 CCER1Q8TC90 406 aaPredicted RBP6.65□□□□□ -1.35
SEC22B-202ENST00000618538 TOP2BQ02880 1626 aa6.64□□□□□ -1.35
SEC22B-202ENST00000618538 POTEJP0CG39 1038 aa6.64□□□□□ -1.35
SEC22B-202ENST00000618538 BIVM-ERCC5R4GMW8 1640 aa6.63□□□□□ -1.35
SEC22B-202ENST00000618538 CDAN1Q8IWY9 1227 aa6.63□□□□□ -1.35
SEC22B-202ENST00000618538 CLIP1P30622 1438 aa6.62□□□□□ -1.35
SEC22B-202ENST00000618538 MS4A3Q96HJ5 214 aa6.62□□□□□ -1.35
SEC22B-202ENST00000618538 VPS8Q8N3P4 1428 aa6.6□□□□□ -1.35
SEC22B-202ENST00000618538 CUX1P39880 1505 aa6.6□□□□□ -1.35
SEC22B-202ENST00000618538 HMGXB3Q12766 1538 aa6.6□□□□□ -1.35
SEC22B-202ENST00000618538 NCAPD3P42695 1498 aa6.59□□□□□ -1.35
SEC22B-202ENST00000618538 TIE1P35590 1138 aa6.58□□□□□ -1.36
SEC22B-202ENST00000618538 PRXQ9BXM0 1461 aa6.58□□□□□ -1.36
SEC22B-202ENST00000618538 MNX1P50219 401 aaPredicted RBP6.58□□□□□ -1.36
SEC22B-202ENST00000618538 ARAP1Q96P48 1450 aa6.57□□□□□ -1.36
SEC22B-202ENST00000618538 IER5LQ5T953 404 aa6.57□□□□□ -1.36
SEC22B-202ENST00000618538 ERICH3Q5RHP9 1530 aa6.56□□□□□ -1.36
SEC22B-202ENST00000618538 ATN1P54259 1190 aaPredicted RBP6.56□□□□□ -1.36
SEC22B-202ENST00000618538 RANGAP1P46060 587 aaPredicted RBP6.55□□□□□ -1.36
SEC22B-202ENST00000618538 CFTRP13569 1480 aa6.55□□□□□ -1.36
SEC22B-202ENST00000618538 NEUROD1Q13562 356 aa6.54□□□□□ -1.36
SEC22B-202ENST00000618538 DIEXFQ68CQ4 756 aaKnown RBP6.54□□□□□ -1.36
SEC22B-202ENST00000618538 TMEM121BQ9BXQ6 578 aaPredicted RBP6.54□□□□□ -1.36
SEC22B-202ENST00000618538 MMRN1Q13201 1228 aa6.52□□□□□ -1.37
SEC22B-202ENST00000618538 SNPHO15079 494 aa6.51□□□□□ -1.37
SEC22B-202ENST00000618538 SEC24BO95487 1268 aa6.51□□□□□ -1.37
SEC22B-202ENST00000618538 KANK4Q5T7N3 995 aaPredicted RBP6.51□□□□□ -1.37
SEC22B-202ENST00000618538 BMP2KQ9NSY1 1161 aaPredicted RBP6.51□□□□□ -1.37
SEC22B-202ENST00000618538 ACIN1Q9UKV3 1341 aaKnown RBP6.51□□□□□ -1.37
SEC22B-202ENST00000618538 KIF12Q96FN5 646 aa6.5□□□□□ -1.37
SEC22B-202ENST00000618538 PRDM2Q13029 1718 aa6.5□□□□□ -1.37
SEC22B-202ENST00000618538 ARHGAP35Q9NRY4 1499 aa6.5□□□□□ -1.37
SEC22B-202ENST00000618538 SGIP1Q9BQI5 828 aa6.5□□□□□ -1.37
SEC22B-202ENST00000618538 CCDC61Q9Y6R9 512 aa6.5□□□□□ -1.37
SEC22B-202ENST00000618538 KIF27Q86VH2 1401 aa6.5□□□□□ -1.37
SEC22B-202ENST00000618538 POTEFA5A3E0 1075 aa6.49□□□□□ -1.37
SEC22B-202ENST00000618538 ZNF316A6NFI3 1004 aaPredicted RBP6.49□□□□□ -1.37
SEC22B-202ENST00000618538 SPNS2Q8IVW8 549 aa6.49□□□□□ -1.37
SEC22B-202ENST00000618538 SPDYE4A6NLX3 237 aa6.48□□□□□ -1.37
SEC22B-202ENST00000618538 DHX57Q6P158 1386 aaKnown RBP6.47□□□□□ -1.37
SEC22B-202ENST00000618538 RRBP1Q9P2E9 1410 aaKnown RBP6.47□□□□□ -1.37
SEC22B-202ENST00000618538 IGF1RP08069 1367 aa6.46□□□□□ -1.38
SEC22B-202ENST00000618538 CUX2O14529 1486 aa6.46□□□□□ -1.38
SEC22B-202ENST00000618538 ST18O60284 1047 aa6.46□□□□□ -1.38
SEC22B-202ENST00000618538 FGD5Q6ZNL6 1462 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms