RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 FHAD1B1AJZ9 1412 aa17.51■□□□□ 0.39
CPEB1-216ENST00000618449 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
CPEB1-216ENST00000618449 CTTNBP2Q8WZ74 1663 aa17.49■□□□□ 0.39
CPEB1-216ENST00000618449 TTBK1Q5TCY1 1321 aaPredicted RBP17.45■□□□□ 0.38
CPEB1-216ENST00000618449 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
CPEB1-216ENST00000618449 APLP2Q06481 763 aa17.41■□□□□ 0.38
CPEB1-216ENST00000618449 P3H3Q8IVL6 736 aa17.39■□□□□ 0.37
CPEB1-216ENST00000618449 EFCAB5A4FU69 1503 aa17.39■□□□□ 0.37
CPEB1-216ENST00000618449 MAGI1Q96QZ7 1491 aaPredicted RBP17.38■□□□□ 0.37
CPEB1-216ENST00000618449 FHOD3Q2V2M9 1422 aa17.35■□□□□ 0.37
CPEB1-216ENST00000618449 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
CPEB1-216ENST00000618449 SYNJ2O15056 1496 aa17.33■□□□□ 0.36
CPEB1-216ENST00000618449 SAMD9Q5K651 1589 aa17.32■□□□□ 0.36
CPEB1-216ENST00000618449 IQGAP2Q13576 1575 aa17.32■□□□□ 0.36
CPEB1-216ENST00000618449 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
CPEB1-216ENST00000618449 FBLN2P98095 1184 aa17.28■□□□□ 0.36
CPEB1-216ENST00000618449 KANK4Q5T7N3 995 aaPredicted RBP17.28■□□□□ 0.36
CPEB1-216ENST00000618449 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.36
CPEB1-216ENST00000618449 PCF11O94913 1555 aaKnown RBP17.26■□□□□ 0.35
CPEB1-216ENST00000618449 FMN1Q68DA7 1419 aa17.25■□□□□ 0.35
CPEB1-216ENST00000618449 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
CPEB1-216ENST00000618449 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
CPEB1-216ENST00000618449 UGGT2Q9NYU1 1516 aa17.23■□□□□ 0.35
CPEB1-216ENST00000618449 CASKIN1Q8WXD9 1431 aa17.22■□□□□ 0.35
CPEB1-216ENST00000618449 FYCO1Q9BQS8 1478 aa17.22■□□□□ 0.35
CPEB1-216ENST00000618449 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
CPEB1-216ENST00000618449 TIAM1Q13009 1591 aa17.22■□□□□ 0.35
CPEB1-216ENST00000618449 ATP1B4Q9UN42 357 aaPredicted RBP17.21■□□□□ 0.35
CPEB1-216ENST00000618449 NUP160Q12769 1436 aa17.21■□□□□ 0.35
CPEB1-216ENST00000618449 DISP1Q96F81 1524 aa17.16■□□□□ 0.34
CPEB1-216ENST00000618449 CFAP43Q8NDM7 1665 aa17.16■□□□□ 0.34
CPEB1-216ENST00000618449 LRRC9Q6ZRR7 1453 aa17.15■□□□□ 0.34
CPEB1-216ENST00000618449 KIAA0556O60303 1618 aa17.15■□□□□ 0.34
CPEB1-216ENST00000618449 CHD1O14646 1710 aa17.12■□□□□ 0.33
CPEB1-216ENST00000618449 JPH4Q96JJ6 628 aa17.11■□□□□ 0.33
CPEB1-216ENST00000618449 LRRIQ1Q96JM4 1722 aa17.1■□□□□ 0.33
CPEB1-216ENST00000618449 RRBP1Q9P2E9 1410 aaKnown RBP17.06■□□□□ 0.32
CPEB1-216ENST00000618449 HECW1Q76N89 1606 aa17.05■□□□□ 0.32
CPEB1-216ENST00000618449 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
CPEB1-216ENST00000618449 CARMIL2Q6F5E8 1435 aa17.05■□□□□ 0.32
CPEB1-216ENST00000618449 PHLDB1Q86UU1 1377 aa17.02■□□□□ 0.32
CPEB1-216ENST00000618449 CCDC18Q5T9S5 1454 aa17.02■□□□□ 0.32
CPEB1-216ENST00000618449 MTUS2Q5JR59 1369 aa17.02■□□□□ 0.31
CPEB1-216ENST00000618449 EPRSP07814 1512 aaKnown RBP17.01■□□□□ 0.31
CPEB1-216ENST00000618449 CCNB3Q8WWL7 1395 aa17.01■□□□□ 0.31
CPEB1-216ENST00000618449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
CPEB1-216ENST00000618449 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
CPEB1-216ENST00000618449 PELP1Q8IZL8 1130 aaKnown RBP16.98■□□□□ 0.31
CPEB1-216ENST00000618449 RAPGEF6Q8TEU7 1601 aa16.98■□□□□ 0.31
CPEB1-216ENST00000618449 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
CPEB1-216ENST00000618449 CDK13Q14004 1512 aaKnown RBP16.98■□□□□ 0.31
CPEB1-216ENST00000618449 MAGI3Q5TCQ9 1506 aa16.97■□□□□ 0.31
CPEB1-216ENST00000618449 CCER1Q8TC90 406 aaPredicted RBP16.97■□□□□ 0.31
CPEB1-216ENST00000618449 NUP153P49790 1475 aaKnown RBP16.97■□□□□ 0.31
CPEB1-216ENST00000618449 PLB1Q6P1J6 1458 aa16.96■□□□□ 0.31
CPEB1-216ENST00000618449 EHBP1L1Q8N3D4 1523 aa16.96■□□□□ 0.31
CPEB1-216ENST00000618449 SHROOM2Q13796 1616 aa16.94■□□□□ 0.3
CPEB1-216ENST00000618449 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
CPEB1-216ENST00000618449 SUPT6HQ7KZ85 1726 aaKnown RBP16.92■□□□□ 0.3
CPEB1-216ENST00000618449 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
CPEB1-216ENST00000618449 ITGAEP38570 1179 aa16.89■□□□□ 0.29
CPEB1-216ENST00000618449 ABCA8O94911 1581 aa16.89■□□□□ 0.29
CPEB1-216ENST00000618449 PTPRGP23470 1445 aa16.88■□□□□ 0.29
CPEB1-216ENST00000618449 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
CPEB1-216ENST00000618449 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
CPEB1-216ENST00000618449 FGD6Q6ZV73 1430 aa16.87■□□□□ 0.29
CPEB1-216ENST00000618449 ERCC6L2Q5T890 1561 aa16.87■□□□□ 0.29
CPEB1-216ENST00000618449 MYOM3Q5VTT5 1437 aa16.86■□□□□ 0.29
CPEB1-216ENST00000618449 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
CPEB1-216ENST00000618449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.84■□□□□ 0.29
CPEB1-216ENST00000618449 ATP10BO94823 1461 aa16.8■□□□□ 0.28
CPEB1-216ENST00000618449 TROQ12816 1431 aaPredicted RBP16.8■□□□□ 0.28
CPEB1-216ENST00000618449 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
CPEB1-216ENST00000618449 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.27
CPEB1-216ENST00000618449 PLEKHD1A6NEE1 506 aa16.74■□□□□ 0.27
CPEB1-216ENST00000618449 MIA2Q96PC5 1412 aa16.74■□□□□ 0.27
CPEB1-216ENST00000618449 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
CPEB1-216ENST00000618449 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
CPEB1-216ENST00000618449 KIF14Q15058 1648 aa16.73■□□□□ 0.27
CPEB1-216ENST00000618449 ADCY10Q96PN6 1610 aa16.73■□□□□ 0.27
CPEB1-216ENST00000618449 ABCC2Q92887 1545 aa16.72■□□□□ 0.27
CPEB1-216ENST00000618449 PTPRKQ15262 1439 aa16.71■□□□□ 0.27
CPEB1-216ENST00000618449 RAB3GAP2Q9H2M9 1393 aa16.71■□□□□ 0.27
CPEB1-216ENST00000618449 SETD5Q9C0A6 1442 aa16.71■□□□□ 0.27
CPEB1-216ENST00000618449 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
CPEB1-216ENST00000618449 GPATCH8Q9UKJ3 1502 aaKnown RBP16.67■□□□□ 0.26
CPEB1-216ENST00000618449 UHRF1BP1LA0JNW5 1464 aa16.66■□□□□ 0.26
CPEB1-216ENST00000618449 ZNF644Q9H582 1327 aaPredicted RBP16.65■□□□□ 0.26
CPEB1-216ENST00000618449 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
CPEB1-216ENST00000618449 ITSN2Q9NZM3 1697 aa16.65■□□□□ 0.26
CPEB1-216ENST00000618449 CFDP1Q9UEE9 299 aaPredicted RBP16.64■□□□□ 0.25
CPEB1-216ENST00000618449 HFM1A2PYH4 1435 aa16.62■□□□□ 0.25
CPEB1-216ENST00000618449 KDM5BQ9UGL1 1544 aa16.62■□□□□ 0.25
CPEB1-216ENST00000618449 ZCCHC11Q5TAX3 1644 aaKnown RBP16.61■□□□□ 0.25
CPEB1-216ENST00000618449 CDC42BPAQ5VT25 1732 aa16.61■□□□□ 0.25
CPEB1-216ENST00000618449 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
CPEB1-216ENST00000618449 CLSPNQ9HAW4 1339 aa16.6■□□□□ 0.25
CPEB1-216ENST00000618449 CAMSAP2Q08AD1 1489 aa16.6■□□□□ 0.25
CPEB1-216ENST00000618449 NAIPQ13075 1403 aa16.59■□□□□ 0.25
CPEB1-216ENST00000618449 DAPK1P53355 1430 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms