RNA–Protein interactions for RNA: ENST00000618139.2

EEF1D-256, Transcript of eukaryotic translation elongation factor 1 delta, human

TSL 5 BASIC

Gene EEF1D, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EEF1D-256	ENST00000618139	P3H3	Q8IVL6	736 aa		34.59	■■■■□ 3.13
EEF1D-256	ENST00000618139	ZEB1	P37275	1124 aa	Predicted RBP	34.56	■■■■□ 3.12
EEF1D-256	ENST00000618139	ZNF608	Q9ULD9	1512 aa	Predicted RBP	34.54	■■■■□ 3.12
EEF1D-256	ENST00000618139	THOC2	Q8NI27	1593 aa	Known RBP	34.53	■■■■□ 3.12
EEF1D-256	ENST00000618139	IFT140	Q96RY7	1462 aa		34.52	■■■■□ 3.12
EEF1D-256	ENST00000618139	FHOD3	Q2V2M9	1422 aa		34.5	■■■■□ 3.11
EEF1D-256	ENST00000618139	EFCAB5	A4FU69	1503 aa		34.48	■■■■□ 3.11
EEF1D-256	ENST00000618139	ADAMTS12	P58397	1594 aa		34.44	■■■■□ 3.1
EEF1D-256	ENST00000618139	GRIN2B	Q13224	1484 aa		34.43	■■■■□ 3.1
EEF1D-256	ENST00000618139	PCF11	O94913	1555 aa	Known RBP	34.43	■■■■□ 3.1
EEF1D-256	ENST00000618139	FHAD1	B1AJZ9	1412 aa		34.42	■■■■□ 3.1
EEF1D-256	ENST00000618139	HNRNPUL2	Q1KMD3	747 aa	Known RBP	34.42	■■■■□ 3.1
EEF1D-256	ENST00000618139	CCER1	Q8TC90	406 aa	Predicted RBP	34.42	■■■■□ 3.1
EEF1D-256	ENST00000618139	TIAM1	Q13009	1591 aa		34.41	■■■■□ 3.1
EEF1D-256	ENST00000618139	EIF4G3	O43432	1585 aa	Known RBP	34.35	■■■■□ 3.09
EEF1D-256	ENST00000618139	SAMD9	Q5K651	1589 aa		34.35	■■■■□ 3.09
EEF1D-256	ENST00000618139	MAP3K1	Q13233	1512 aa		34.34	■■■■□ 3.09
EEF1D-256	ENST00000618139	CFAP43	Q8NDM7	1665 aa		34.28	■■■■□ 3.08
EEF1D-256	ENST00000618139	ATP1B4	Q9UN42	357 aa	Predicted RBP	34.26	■■■■□ 3.08
EEF1D-256	ENST00000618139	LRRC9	Q6ZRR7	1453 aa		34.24	■■■■□ 3.07
EEF1D-256	ENST00000618139	FYCO1	Q9BQS8	1478 aa		34.24	■■■■□ 3.07
EEF1D-256	ENST00000618139	SNAPC4	Q5SXM2	1469 aa		34.24	■■■■□ 3.07
EEF1D-256	ENST00000618139	CASKIN1	Q8WXD9	1431 aa		34.23	■■■■□ 3.07
EEF1D-256	ENST00000618139	RRBP1	Q9P2E9	1410 aa	Known RBP	34.21	■■■■□ 3.07
EEF1D-256	ENST00000618139	FMN1	Q68DA7	1419 aa		34.2	■■■■□ 3.07
EEF1D-256	ENST00000618139	IQGAP2	Q13576	1575 aa		34.2	■■■■□ 3.07
EEF1D-256	ENST00000618139	LRRIQ1	Q96JM4	1722 aa		34.13	■■■■□ 3.05
EEF1D-256	ENST00000618139	CCNB3	Q8WWL7	1395 aa		34.09	■■■■□ 3.05
EEF1D-256	ENST00000618139	GRIN2A	Q12879	1464 aa		34.07	■■■■□ 3.05
EEF1D-256	ENST00000618139	PHLDB1	Q86UU1	1377 aa		34.05	■■■■□ 3.04
EEF1D-256	ENST00000618139	MAGI1	Q96QZ7	1491 aa	Predicted RBP	34.03	■■■■□ 3.04
EEF1D-256	ENST00000618139	UGGT2	Q9NYU1	1516 aa		33.99	■■■■□ 3.03
EEF1D-256	ENST00000618139	KIAA0586	Q9BVV6	1533 aa		33.98	■■■■□ 3.03
EEF1D-256	ENST00000618139	SYNJ2	O15056	1496 aa		33.96	■■■■□ 3.03
EEF1D-256	ENST00000618139	CHMP7	Q8WUX9	453 aa	Predicted RBP	33.92	■■■■□ 3.02
EEF1D-256	ENST00000618139	CEP170	Q5SW79	1584 aa		33.91	■■■■□ 3.02
EEF1D-256	ENST00000618139	ITGAE	P38570	1179 aa		33.91	■■■■□ 3.02
EEF1D-256	ENST00000618139	FBLN2	P98095	1184 aa		33.89	■■■■□ 3.02
EEF1D-256	ENST00000618139	DISP1	Q96F81	1524 aa		33.88	■■■■□ 3.01
EEF1D-256	ENST00000618139	KIAA0556	O60303	1618 aa		33.86	■■■■□ 3.01
EEF1D-256	ENST00000618139	MTUS2	Q5JR59	1369 aa		33.84	■■■■□ 3.01
EEF1D-256	ENST00000618139	HECW1	Q76N89	1606 aa		33.81	■■■■□ 3
EEF1D-256	ENST00000618139	MAGI3	Q5TCQ9	1506 aa		33.79	■■■■□ 3
EEF1D-256	ENST00000618139	FAM50A	Q14320	339 aa	Known RBP	33.78	■■■■□ 3
EEF1D-256	ENST00000618139	NUP160	Q12769	1436 aa		33.75	■■■□□ 2.99
EEF1D-256	ENST00000618139	CCDC18	Q5T9S5	1454 aa		33.74	■■■□□ 2.99
EEF1D-256	ENST00000618139	EPRS	P07814	1512 aa	Known RBP	33.73	■■■□□ 2.99
EEF1D-256	ENST00000618139	CDK13	Q14004	1512 aa	Known RBP	33.72	■■■□□ 2.99
EEF1D-256	ENST00000618139	EHBP1L1	Q8N3D4	1523 aa		33.72	■■■□□ 2.99
EEF1D-256	ENST00000618139	DHX57	Q6P158	1386 aa	Known RBP	33.71	■■■□□ 2.99
EEF1D-256	ENST00000618139	NCOA2	Q15596	1464 aa		33.71	■■■□□ 2.99
EEF1D-256	ENST00000618139	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.71	■■■□□ 2.99
EEF1D-256	ENST00000618139	ARID3C	A6NKF2	412 aa		33.69	■■■□□ 2.98
EEF1D-256	ENST00000618139	FGD6	Q6ZV73	1430 aa		33.68	■■■□□ 2.98
EEF1D-256	ENST00000618139	JPH4	Q96JJ6	628 aa		33.61	■■■□□ 2.97
EEF1D-256	ENST00000618139	RAB3GAP2	Q9H2M9	1393 aa		33.61	■■■□□ 2.97
EEF1D-256	ENST00000618139	RAPGEF6	Q8TEU7	1601 aa		33.6	■■■□□ 2.97
EEF1D-256	ENST00000618139	ARHGEF11	O15085	1522 aa		33.6	■■■□□ 2.97
EEF1D-256	ENST00000618139	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.6	■■■□□ 2.97	5e-9	■■■■□ 22.2
EEF1D-256	ENST00000618139	MYOM3	Q5VTT5	1437 aa		33.58	■■■□□ 2.97
EEF1D-256	ENST00000618139	NUP153	P49790	1475 aa	Known RBP	33.58	■■■□□ 2.97
EEF1D-256	ENST00000618139	CHD1	O14646	1710 aa		33.55	■■■□□ 2.96
EEF1D-256	ENST00000618139	SETD5	Q9C0A6	1442 aa		33.54	■■■□□ 2.96
EEF1D-256	ENST00000618139	PLB1	Q6P1J6	1458 aa		33.5	■■■□□ 2.95
EEF1D-256	ENST00000618139	CARMIL2	Q6F5E8	1435 aa		33.5	■■■□□ 2.95
EEF1D-256	ENST00000618139	CLSPN	Q9HAW4	1339 aa		33.49	■■■□□ 2.95
EEF1D-256	ENST00000618139	PTPN23	Q9H3S7	1636 aa		33.47	■■■□□ 2.95
EEF1D-256	ENST00000618139	PTPRK	Q15262	1439 aa		33.45	■■■□□ 2.95
EEF1D-256	ENST00000618139	MAPKBP1	O60336	1514 aa		33.34	■■■□□ 2.93
EEF1D-256	ENST00000618139	PRG4	Q92954	1404 aa	Predicted RBP	33.34	■■■□□ 2.93
EEF1D-256	ENST00000618139	TCOF1	Q13428	1488 aa	Known RBP	33.34	■■■□□ 2.93
EEF1D-256	ENST00000618139	ABCA8	O94911	1581 aa		33.3	■■■□□ 2.92
EEF1D-256	ENST00000618139	MIA2	Q96PC5	1412 aa		33.26	■■■□□ 2.92
EEF1D-256	ENST00000618139	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.26	■■■□□ 2.92
EEF1D-256	ENST00000618139	HFM1	A2PYH4	1435 aa		33.25	■■■□□ 2.91
EEF1D-256	ENST00000618139	TRO	Q12816	1431 aa	Predicted RBP	33.23	■■■□□ 2.91
EEF1D-256	ENST00000618139	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.22	■■■□□ 2.91
EEF1D-256	ENST00000618139	SHROOM2	Q13796	1616 aa		33.22	■■■□□ 2.91
EEF1D-256	ENST00000618139	KIF14	Q15058	1648 aa		33.2	■■■□□ 2.91
EEF1D-256	ENST00000618139	NAIP	Q13075	1403 aa		33.2	■■■□□ 2.91
EEF1D-256	ENST00000618139	PTPRG	P23470	1445 aa		33.17	■■■□□ 2.9
EEF1D-256	ENST00000618139	CHIC2	Q9UKJ5	165 aa		33.16	■■■□□ 2.9
EEF1D-256	ENST00000618139	ATP10B	O94823	1461 aa		33.16	■■■□□ 2.9
EEF1D-256	ENST00000618139	ADCY10	Q96PN6	1610 aa		33.15	■■■□□ 2.9
EEF1D-256	ENST00000618139	ERCC6L2	Q5T890	1561 aa		33.14	■■■□□ 2.9
EEF1D-256	ENST00000618139	ZNF644	Q9H582	1327 aa	Predicted RBP	33.13	■■■□□ 2.89
EEF1D-256	ENST00000618139	DIEXF	Q68CQ4	756 aa	Known RBP	33.13	■■■□□ 2.89
EEF1D-256	ENST00000618139	RRP7BP	Q9NSQ0	103 aa		33.1	■■■□□ 2.89
EEF1D-256	ENST00000618139	GCC2	Q8IWJ2	1684 aa		33.08	■■■□□ 2.89
EEF1D-256	ENST00000618139	SIN3A	Q96ST3	1273 aa		33.06	■■■□□ 2.88
EEF1D-256	ENST00000618139	ITSN2	Q9NZM3	1697 aa		33.05	■■■□□ 2.88
EEF1D-256	ENST00000618139	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.05	■■■□□ 2.88
EEF1D-256	ENST00000618139	CLASP1	Q7Z460	1538 aa		33.04	■■■□□ 2.88
EEF1D-256	ENST00000618139	DNMT1	P26358	1616 aa	Known RBP	33.04	■■■□□ 2.88
EEF1D-256	ENST00000618139	PLEKHD1	A6NEE1	506 aa		33.04	■■■□□ 2.88
EEF1D-256	ENST00000618139	KDM6B	O15054	1643 aa		33.03	■■■□□ 2.88
EEF1D-256	ENST00000618139	DAPK1	P53355	1430 aa		33.02	■■■□□ 2.88
EEF1D-256	ENST00000618139	UACA	Q9BZF9	1416 aa		33.02	■■■□□ 2.88
EEF1D-256	ENST00000618139	ABCC5	O15440	1437 aa		33	■■■□□ 2.87
EEF1D-256	ENST00000618139	NEUROD1	Q13562	356 aa		32.98	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 544.7 ms