RNA–Protein interactions for RNA: ENST00000618119.4

ALK-205, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 5 BASIC

Gene ALK, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-205ENST00000618119 IRX6P78412 446 aaPredicted RBP16.07■□□□□ 0.16
ALK-205ENST00000618119 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
ALK-205ENST00000618119 AMER1Q5JTC6 1135 aaPredicted RBP16.04■□□□□ 0.16
ALK-205ENST00000618119 PDE4CQ08493 712 aa16.03■□□□□ 0.16
ALK-205ENST00000618119 BECN1Q14457 450 aa16.02■□□□□ 0.15
ALK-205ENST00000618119 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
ALK-205ENST00000618119 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
ALK-205ENST00000618119 PTMSP20962 102 aa15.97■□□□□ 0.15
ALK-205ENST00000618119 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
ALK-205ENST00000618119 IPO9Q96P70 1041 aaKnown RBP15.94■□□□□ 0.14
ALK-205ENST00000618119 ABCC9O60706 1549 aa15.93■□□□□ 0.14
ALK-205ENST00000618119 DNTTIP2Q5QJE6 756 aaKnown RBP15.9■□□□□ 0.14
ALK-205ENST00000618119 MSNP26038 577 aaKnown RBP15.88■□□□□ 0.13
ALK-205ENST00000618119 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
ALK-205ENST00000618119 TNNT3P45378 269 aaPredicted RBP15.87■□□□□ 0.13
ALK-205ENST00000618119 CANXP27824 592 aaKnown RBP15.87■□□□□ 0.13
ALK-205ENST00000618119 GSE1Q14687 1217 aa15.86■□□□□ 0.13
ALK-205ENST00000618119 IL27Q8NEV9 243 aa15.84■□□□□ 0.13
ALK-205ENST00000618119 GOLGA6L22H0YM25 854 aa15.83■□□□□ 0.13
ALK-205ENST00000618119 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
ALK-205ENST00000618119 PTMAP06454 111 aaKnown RBP15.8■□□□□ 0.12
ALK-205ENST00000618119 RRP9O43818 475 aaKnown RBP15.8■□□□□ 0.12
ALK-205ENST00000618119 B4GALNT3Q6L9W6 998 aa15.79■□□□□ 0.12
ALK-205ENST00000618119 ZMYND15Q9H091 742 aa15.79■□□□□ 0.12
ALK-205ENST00000618119 MAP7D2Q96T17 732 aa15.75■□□□□ 0.11
ALK-205ENST00000618119 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
ALK-205ENST00000618119 APPP05067 770 aa15.75■□□□□ 0.11
ALK-205ENST00000618119 FAM43AQ8N2R8 423 aa15.73■□□□□ 0.11
ALK-205ENST00000618119 PDIA4P13667 645 aaKnown RBP15.72■□□□□ 0.11
ALK-205ENST00000618119 GOLGA6L3A6NEY3 463 aa15.71■□□□□ 0.11
ALK-205ENST00000618119 CHAF1AQ13111 956 aaPredicted RBP15.71■□□□□ 0.11
ALK-205ENST00000618119 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
ALK-205ENST00000618119 ARID3AQ99856 593 aa15.7■□□□□ 0.1
ALK-205ENST00000618119 MRS2Q9HD23 443 aa15.7■□□□□ 0.1
ALK-205ENST00000618119 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
ALK-205ENST00000618119 MTERF4Q7Z6M4 381 aaKnown RBP15.67■□□□□ 0.1
ALK-205ENST00000618119 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
ALK-205ENST00000618119 P3H3Q8IVL6 736 aa15.65■□□□□ 0.1
ALK-205ENST00000618119 MYH16Q9H6N6 1097 aa15.65■□□□□ 0.1
ALK-205ENST00000618119 CCER2I3L3R5 266 aa15.65■□□□□ 0.1
ALK-205ENST00000618119 TCERG1O14776 1098 aaKnown RBP15.64■□□□□ 0.09
ALK-205ENST00000618119 TPM2P07951 284 aa15.63■□□□□ 0.09
ALK-205ENST00000618119 TONSLQ96HA7 1378 aa15.63■□□□□ 0.09
ALK-205ENST00000618119 BRPF3Q9ULD4 1205 aa15.6■□□□□ 0.09
ALK-205ENST00000618119 TAF7LQ5H9L4 462 aa15.59■□□□□ 0.09
ALK-205ENST00000618119 FAM13BQ9NYF5 915 aa15.55■□□□□ 0.08
ALK-205ENST00000618119 ZNF771Q7L3S4 317 aaPredicted RBP15.54■□□□□ 0.08
ALK-205ENST00000618119 TMC1Q8TDI8 760 aa15.54■□□□□ 0.08
ALK-205ENST00000618119 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.52■□□□□ 0.07
ALK-205ENST00000618119 RSF1Q96T23 1441 aaPredicted RBP15.52■□□□□ 0.07
ALK-205ENST00000618119 KIAA2012Q0VF49 1180 aa15.51■□□□□ 0.07
ALK-205ENST00000618119 CLIP1P30622 1438 aa15.51■□□□□ 0.07
ALK-205ENST00000618119 RBM10P98175 930 aaKnown RBP15.51■□□□□ 0.07
ALK-205ENST00000618119 EEA1Q15075 1411 aa15.49■□□□□ 0.07
ALK-205ENST00000618119 CEP162Q5TB80 1403 aa15.49■□□□□ 0.07
ALK-205ENST00000618119 TAF3Q5VWG9 929 aa15.48■□□□□ 0.07
ALK-205ENST00000618119 BBXQ8WY36 941 aaPredicted RBP15.48■□□□□ 0.07
ALK-205ENST00000618119 CALRP27797 417 aaKnown RBP15.48■□□□□ 0.07
ALK-205ENST00000618119 GZF1Q9H116 711 aaPredicted RBP15.48■□□□□ 0.07
ALK-205ENST00000618119 CCDC66A2RUB6 948 aa15.44■□□□□ 0.06
ALK-205ENST00000618119 MSH5O43196 834 aa15.44■□□□□ 0.06
ALK-205ENST00000618119 ARID3CA6NKF2 412 aa15.43■□□□□ 0.06
ALK-205ENST00000618119 GOLGA6L6A8MZA4 724 aa15.43■□□□□ 0.06
ALK-205ENST00000618119 GBP4Q96PP9 640 aa15.43■□□□□ 0.06
ALK-205ENST00000618119 FRAT1Q92837 279 aaPredicted RBP15.43■□□□□ 0.06
ALK-205ENST00000618119 PDCL3Q9H2J4 239 aa15.42■□□□□ 0.06
ALK-205ENST00000618119 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
ALK-205ENST00000618119 CSPP1Q1MSJ5 1256 aa15.42■□□□□ 0.06
ALK-205ENST00000618119 GOLGA6L1Q8N7Z2 621 aa15.41■□□□□ 0.06
ALK-205ENST00000618119 TNIKQ9UKE5 1360 aa15.4■□□□□ 0.06
ALK-205ENST00000618119 NFKBIBQ15653 356 aa15.39■□□□□ 0.05
ALK-205ENST00000618119 RGS3P49796 1198 aa15.39■□□□□ 0.05
ALK-205ENST00000618119 ZNF777Q9ULD5 760 aaPredicted RBP15.39■□□□□ 0.05
ALK-205ENST00000618119 HSCBQ8IWL3 235 aa15.38■□□□□ 0.05
ALK-205ENST00000618119 SLKQ9H2G2 1235 aaPredicted RBP15.37■□□□□ 0.05
ALK-205ENST00000618119 FBLN2P98095 1184 aa15.36■□□□□ 0.05
ALK-205ENST00000618119 HSP90AB1P08238 724 aaKnown RBP15.35■□□□□ 0.05
ALK-205ENST00000618119 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
ALK-205ENST00000618119 UNC13AQ9UPW8 1703 aa15.34■□□□□ 0.05
ALK-205ENST00000618119 PDE4AP27815 886 aa15.34■□□□□ 0.05
ALK-205ENST00000618119 PLCB2Q00722 1185 aa15.33■□□□□ 0.05
ALK-205ENST00000618119 HIRIP3Q9BW71 556 aaPredicted RBP15.33■□□□□ 0.05
ALK-205ENST00000618119 DDX11L8A8MPP1 907 aa15.33■□□□□ 0.04
ALK-205ENST00000618119 NRDCO43847 1150 aa15.32■□□□□ 0.04
ALK-205ENST00000618119 CHIC2Q9UKJ5 165 aa15.32■□□□□ 0.04
ALK-205ENST00000618119 BCL11BQ9C0K0 894 aaPredicted RBP15.31■□□□□ 0.04
ALK-205ENST00000618119 MS4A1P11836 297 aa15.31■□□□□ 0.04
ALK-205ENST00000618119 EIF4G2P78344 907 aaKnown RBP eCLIP15.31■□□□□ 0.04
ALK-205ENST00000618119 MRE11P49959 708 aa15.3■□□□□ 0.04
ALK-205ENST00000618119 SETQ01105 290 aaPredicted RBP15.3■□□□□ 0.04
ALK-205ENST00000618119 HAP1P54257 671 aaPredicted RBP15.3■□□□□ 0.04
ALK-205ENST00000618119 MTUS2Q5JR59 1369 aa15.29■□□□□ 0.04
ALK-205ENST00000618119 PATL2C9JE40 543 aaKnown RBP15.29■□□□□ 0.04
ALK-205ENST00000618119 NACADO15069 1562 aa15.28■□□□□ 0.04
ALK-205ENST00000618119 FGD1P98174 961 aa15.28■□□□□ 0.04
ALK-205ENST00000618119 NAP1L2Q9ULW6 460 aaPredicted RBP15.28■□□□□ 0.04
ALK-205ENST00000618119 R3HCC1Q9Y3T6 440 aaKnown RBP15.26■□□□□ 0.03
ALK-205ENST00000618119 C11orf95C9JLR9 678 aaPredicted RBP15.26■□□□□ 0.03
ALK-205ENST00000618119 SKOR2Q2VWA4 1001 aaPredicted RBP15.26■□□□□ 0.03
ALK-205ENST00000618119 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms