RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 CTTNBP2Q8WZ74 1663 aa32.19■■■□□ 2.74
CNTNAP3B-212ENST00000617422 ADAMTS12P58397 1594 aa32.18■■■□□ 2.74
CNTNAP3B-212ENST00000617422 FHAD1B1AJZ9 1412 aa32.14■■■□□ 2.74
CNTNAP3B-212ENST00000617422 TTBK1Q5TCY1 1321 aaPredicted RBP32.14■■■□□ 2.73
CNTNAP3B-212ENST00000617422 SNAPC4Q5SXM2 1469 aa32.06■■■□□ 2.72
CNTNAP3B-212ENST00000617422 P3H3Q8IVL6 736 aa31.98■■■□□ 2.71
CNTNAP3B-212ENST00000617422 EFCAB5A4FU69 1503 aa31.95■■■□□ 2.7
CNTNAP3B-212ENST00000617422 FHOD3Q2V2M9 1422 aa31.93■■■□□ 2.7
CNTNAP3B-212ENST00000617422 MAGI1Q96QZ7 1491 aaPredicted RBP31.91■■■□□ 2.7
CNTNAP3B-212ENST00000617422 APLP2Q06481 763 aa31.9■■■□□ 2.7
CNTNAP3B-212ENST00000617422 SAMD9Q5K651 1589 aa31.89■■■□□ 2.7
CNTNAP3B-212ENST00000617422 GRIN2AQ12879 1464 aa31.87■■■□□ 2.69
CNTNAP3B-212ENST00000617422 IQGAP2Q13576 1575 aa31.84■■■□□ 2.69
CNTNAP3B-212ENST00000617422 KANK4Q5T7N3 995 aaPredicted RBP31.82■■■□□ 2.68
CNTNAP3B-212ENST00000617422 SYNJ2O15056 1496 aa31.82■■■□□ 2.68
CNTNAP3B-212ENST00000617422 PCF11O94913 1555 aaKnown RBP31.8■■■□□ 2.68
CNTNAP3B-212ENST00000617422 CHMP7Q8WUX9 453 aaPredicted RBP31.74■■■□□ 2.67
CNTNAP3B-212ENST00000617422 KIAA0586Q9BVV6 1533 aa31.72■■■□□ 2.67
CNTNAP3B-212ENST00000617422 CEP170Q5SW79 1584 aa31.72■■■□□ 2.67
CNTNAP3B-212ENST00000617422 FBLN2P98095 1184 aa31.7■■■□□ 2.66
CNTNAP3B-212ENST00000617422 TIAM1Q13009 1591 aa31.7■■■□□ 2.66
CNTNAP3B-212ENST00000617422 UGGT2Q9NYU1 1516 aa31.68■■■□□ 2.66
CNTNAP3B-212ENST00000617422 CASKIN1Q8WXD9 1431 aa31.67■■■□□ 2.66
CNTNAP3B-212ENST00000617422 FMN1Q68DA7 1419 aa31.66■■■□□ 2.66
CNTNAP3B-212ENST00000617422 MAP3K1Q13233 1512 aa31.66■■■□□ 2.66
CNTNAP3B-212ENST00000617422 FYCO1Q9BQS8 1478 aa31.65■■■□□ 2.66
CNTNAP3B-212ENST00000617422 NUP160Q12769 1436 aa31.62■■■□□ 2.65
CNTNAP3B-212ENST00000617422 CFAP43Q8NDM7 1665 aa31.61■■■□□ 2.65
CNTNAP3B-212ENST00000617422 ATP1B4Q9UN42 357 aaPredicted RBP31.59■■■□□ 2.65
CNTNAP3B-212ENST00000617422 DISP1Q96F81 1524 aa31.58■■■□□ 2.65
CNTNAP3B-212ENST00000617422 LRRIQ1Q96JM4 1722 aa31.56■■■□□ 2.64
CNTNAP3B-212ENST00000617422 LRRC9Q6ZRR7 1453 aa31.55■■■□□ 2.64
CNTNAP3B-212ENST00000617422 KIAA0556O60303 1618 aa31.53■■■□□ 2.64
CNTNAP3B-212ENST00000617422 CHD1O14646 1710 aa31.5■■■□□ 2.63
CNTNAP3B-212ENST00000617422 JPH4Q96JJ6 628 aa31.41■■■□□ 2.62
CNTNAP3B-212ENST00000617422 RRBP1Q9P2E9 1410 aaKnown RBP31.39■■■□□ 2.62
CNTNAP3B-212ENST00000617422 HNRNPUL2Q1KMD3 747 aaKnown RBP31.36■■■□□ 2.61
CNTNAP3B-212ENST00000617422 PHLDB1Q86UU1 1377 aa31.34■■■□□ 2.61
CNTNAP3B-212ENST00000617422 HECW1Q76N89 1606 aa31.34■■■□□ 2.61
CNTNAP3B-212ENST00000617422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.3■■■□□ 2.6
CNTNAP3B-212ENST00000617422 EPRSP07814 1512 aaKnown RBP31.28■■■□□ 2.6
CNTNAP3B-212ENST00000617422 MAGI3Q5TCQ9 1506 aa31.28■■■□□ 2.6
CNTNAP3B-212ENST00000617422 CCNB3Q8WWL7 1395 aa31.27■■■□□ 2.6
CNTNAP3B-212ENST00000617422 CDK13Q14004 1512 aaKnown RBP31.26■■■□□ 2.59
CNTNAP3B-212ENST00000617422 CARMIL2Q6F5E8 1435 aa31.26■■■□□ 2.59
CNTNAP3B-212ENST00000617422 CCDC18Q5T9S5 1454 aa31.25■■■□□ 2.59
CNTNAP3B-212ENST00000617422 MTUS2Q5JR59 1369 aa31.24■■■□□ 2.59
CNTNAP3B-212ENST00000617422 RAPGEF6Q8TEU7 1601 aa31.23■■■□□ 2.59
CNTNAP3B-212ENST00000617422 ARID3CA6NKF2 412 aa31.22■■■□□ 2.59
CNTNAP3B-212ENST00000617422 NUP153P49790 1475 aaKnown RBP31.22■■■□□ 2.59
CNTNAP3B-212ENST00000617422 PLB1Q6P1J6 1458 aa31.2■■■□□ 2.58
CNTNAP3B-212ENST00000617422 PRG4Q92954 1404 aaPredicted RBP31.19■■■□□ 2.58
CNTNAP3B-212ENST00000617422 SHROOM2Q13796 1616 aa31.18■■■□□ 2.58
CNTNAP3B-212ENST00000617422 EHBP1L1Q8N3D4 1523 aa31.17■■■□□ 2.58
CNTNAP3B-212ENST00000617422 NCOA2Q15596 1464 aa31.13■■■□□ 2.57
CNTNAP3B-212ENST00000617422 SUPT6HQ7KZ85 1726 aaKnown RBP31.11■■■□□ 2.57
CNTNAP3B-212ENST00000617422 CLASP1Q7Z460 1538 aa31.1■■■□□ 2.57
CNTNAP3B-212ENST00000617422 CCER1Q8TC90 406 aaPredicted RBP31.09■■■□□ 2.57
CNTNAP3B-212ENST00000617422 ARHGEF11O15085 1522 aa31.08■■■□□ 2.57
CNTNAP3B-212ENST00000617422 ERCC6L2Q5T890 1561 aa31.08■■■□□ 2.57
CNTNAP3B-212ENST00000617422 ABCA8O94911 1581 aa31.06■■■□□ 2.56
CNTNAP3B-212ENST00000617422 ITGAEP38570 1179 aa31.05■■■□□ 2.56
CNTNAP3B-212ENST00000617422 FGD6Q6ZV73 1430 aa31.03■■■□□ 2.56
CNTNAP3B-212ENST00000617422 ZEB1P37275 1124 aaPredicted RBP31.02■■■□□ 2.56
CNTNAP3B-212ENST00000617422 FAM50AQ14320 339 aaKnown RBP31.02■■■□□ 2.56
CNTNAP3B-212ENST00000617422 MYOM3Q5VTT5 1437 aa31■■■□□ 2.55
CNTNAP3B-212ENST00000617422 PTPRGP23470 1445 aa30.99■■■□□ 2.55
CNTNAP3B-212ENST00000617422 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.93■■■□□ 2.54
CNTNAP3B-212ENST00000617422 ATP10BO94823 1461 aa30.9■■■□□ 2.54
CNTNAP3B-212ENST00000617422 PTPN23Q9H3S7 1636 aa30.86■■■□□ 2.53
CNTNAP3B-212ENST00000617422 TROQ12816 1431 aaPredicted RBP30.86■■■□□ 2.53
CNTNAP3B-212ENST00000617422 CDK11AQ9UQ88 783 aaPredicted RBP30.85■■■□□ 2.53
CNTNAP3B-212ENST00000617422 KIF14Q15058 1648 aa30.82■■■□□ 2.52
CNTNAP3B-212ENST00000617422 UACAQ9BZF9 1416 aa30.81■■■□□ 2.52
CNTNAP3B-212ENST00000617422 PTPRKQ15262 1439 aa30.8■■■□□ 2.52
CNTNAP3B-212ENST00000617422 TCOF1Q13428 1488 aaKnown RBP30.79■■■□□ 2.52
CNTNAP3B-212ENST00000617422 ADCY10Q96PN6 1610 aa30.78■■■□□ 2.52
CNTNAP3B-212ENST00000617422 RAB3GAP2Q9H2M9 1393 aa30.76■■■□□ 2.51
CNTNAP3B-212ENST00000617422 MIA2Q96PC5 1412 aa30.75■■■□□ 2.51
CNTNAP3B-212ENST00000617422 DHX57Q6P158 1386 aaKnown RBP30.73■■■□□ 2.51
CNTNAP3B-212ENST00000617422 ABCC2Q92887 1545 aa30.72■■■□□ 2.51
CNTNAP3B-212ENST00000617422 SETD5Q9C0A6 1442 aa30.72■■■□□ 2.51
CNTNAP3B-212ENST00000617422 PLEKHD1A6NEE1 506 aa30.69■■■□□ 2.5
CNTNAP3B-212ENST00000617422 OSCARQ8IYS5 282 aa30.66■■■□□ 2.5
CNTNAP3B-212ENST00000617422 GPATCH8Q9UKJ3 1502 aaKnown RBP30.66■■■□□ 2.5
CNTNAP3B-212ENST00000617422 ZNF644Q9H582 1327 aaPredicted RBP30.65■■■□□ 2.5
CNTNAP3B-212ENST00000617422 ABCC10Q5T3U5 1492 aa30.64■■■□□ 2.49
CNTNAP3B-212ENST00000617422 ITSN2Q9NZM3 1697 aa30.6■■■□□ 2.49
CNTNAP3B-212ENST00000617422 UHRF1BP1LA0JNW5 1464 aa30.59■■■□□ 2.49
CNTNAP3B-212ENST00000617422 CDC42BPAQ5VT25 1732 aa30.59■■■□□ 2.49
CNTNAP3B-212ENST00000617422 HFM1A2PYH4 1435 aa30.57■■■□□ 2.48
CNTNAP3B-212ENST00000617422 ZCCHC11Q5TAX3 1644 aaKnown RBP30.55■■■□□ 2.48
CNTNAP3B-212ENST00000617422 CFDP1Q9UEE9 299 aaPredicted RBP30.54■■■□□ 2.48
CNTNAP3B-212ENST00000617422 NAIPQ13075 1403 aa30.54■■■□□ 2.48
CNTNAP3B-212ENST00000617422 CHIC2Q9UKJ5 165 aa30.53■■■□□ 2.48
CNTNAP3B-212ENST00000617422 CAMSAP2Q08AD1 1489 aa30.52■■■□□ 2.48
CNTNAP3B-212ENST00000617422 KDM5BQ9UGL1 1544 aa30.52■■■□□ 2.48
CNTNAP3B-212ENST00000617422 DNMT1P26358 1616 aaKnown RBP30.52■■■□□ 2.48
CNTNAP3B-212ENST00000617422 ABCC5O15440 1437 aa30.5■■■□□ 2.47
CNTNAP3B-212ENST00000617422 DAPK1P53355 1430 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms