RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 TSPY10P0CW01 314 aa14.03□□□□□ -0.16
TPT1-214ENST00000616577 HSP90AA1P07900 732 aaKnown RBP14.02□□□□□ -0.16
TPT1-214ENST00000616577 WDR43Q15061 677 aaKnown RBP eCLIP14.01□□□□□ -0.17
TPT1-214ENST00000616577 ARXQ96QS3 562 aa13.99□□□□□ -0.17
TPT1-214ENST00000616577 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.99□□□□□ -0.17
TPT1-214ENST00000616577 ANP32EQ9BTT0 268 aa13.98□□□□□ -0.17
TPT1-214ENST00000616577 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.18
TPT1-214ENST00000616577 ANP32BQ92688 251 aaKnown RBP13.93□□□□□ -0.18
TPT1-214ENST00000616577 CECR2Q9BXF3 1484 aa13.92□□□□□ -0.18
TPT1-214ENST00000616577 SOGA1O94964 1423 aa13.92□□□□□ -0.18
TPT1-214ENST00000616577 RGL3Q3MIN7 710 aa13.91□□□□□ -0.18
TPT1-214ENST00000616577 STAG3Q9UJ98 1225 aa13.91□□□□□ -0.18
TPT1-214ENST00000616577 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
TPT1-214ENST00000616577 KIF27Q86VH2 1401 aa13.89□□□□□ -0.19
TPT1-214ENST00000616577 CHMP7Q8WUX9 453 aaPredicted RBP13.88□□□□□ -0.19
TPT1-214ENST00000616577 CCNB3Q8WWL7 1395 aa13.86□□□□□ -0.19
TPT1-214ENST00000616577 PPP4R2Q9NY27 417 aa13.85□□□□□ -0.19
TPT1-214ENST00000616577 B4GALNT3Q6L9W6 998 aa13.84□□□□□ -0.19
TPT1-214ENST00000616577 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
TPT1-214ENST00000616577 ESF1Q9H501 851 aaKnown RBP13.84□□□□□ -0.19
TPT1-214ENST00000616577 CARD11Q9BXL7 1154 aa13.83□□□□□ -0.19
TPT1-214ENST00000616577 BAZ1BQ9UIG0 1483 aaKnown RBP13.83□□□□□ -0.2
TPT1-214ENST00000616577 CFDP1Q9UEE9 299 aaPredicted RBP13.82□□□□□ -0.2
TPT1-214ENST00000616577 PLEKHD1A6NEE1 506 aa13.81□□□□□ -0.2
TPT1-214ENST00000616577 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
TPT1-214ENST00000616577 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
TPT1-214ENST00000616577 KCNH8Q96L42 1107 aa13.8□□□□□ -0.2
TPT1-214ENST00000616577 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
TPT1-214ENST00000616577 DDRGK1Q96HY6 314 aa13.79□□□□□ -0.2
TPT1-214ENST00000616577 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
TPT1-214ENST00000616577 NACADO15069 1562 aa13.77□□□□□ -0.21
TPT1-214ENST00000616577 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
TPT1-214ENST00000616577 VPS8Q8N3P4 1428 aa13.76□□□□□ -0.21
TPT1-214ENST00000616577 KNSTRNQ9Y448 316 aa13.76□□□□□ -0.21
TPT1-214ENST00000616577 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
TPT1-214ENST00000616577 BECN1Q14457 450 aa13.75□□□□□ -0.21
TPT1-214ENST00000616577 NOP58Q9Y2X3 529 aaKnown RBP13.74□□□□□ -0.21
TPT1-214ENST00000616577 RGS3P49796 1198 aa13.74□□□□□ -0.21
TPT1-214ENST00000616577 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
TPT1-214ENST00000616577 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
TPT1-214ENST00000616577 CCER2I3L3R5 266 aa13.73□□□□□ -0.21
TPT1-214ENST00000616577 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
TPT1-214ENST00000616577 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
TPT1-214ENST00000616577 MYH16Q9H6N6 1097 aa13.71□□□□□ -0.21
TPT1-214ENST00000616577 GLIPR1L2Q4G1C9 344 aa13.71□□□□□ -0.21
TPT1-214ENST00000616577 RTN4Q9NQC3 1192 aaKnown RBP13.71□□□□□ -0.22
TPT1-214ENST00000616577 MROH2BQ7Z745 1585 aa13.71□□□□□ -0.22
TPT1-214ENST00000616577 PPM1GO15355 546 aaPredicted RBP13.7□□□□□ -0.22
TPT1-214ENST00000616577 CC2D1BQ5T0F9 858 aaKnown RBP13.7□□□□□ -0.22
TPT1-214ENST00000616577 CARMIL1Q5VZK9 1371 aa13.7□□□□□ -0.22
TPT1-214ENST00000616577 SETD5Q9C0A6 1442 aa13.7□□□□□ -0.22
TPT1-214ENST00000616577 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
TPT1-214ENST00000616577 FHAD1B1AJZ9 1412 aa13.69□□□□□ -0.22
TPT1-214ENST00000616577 CDCA8Q53HL2 280 aa13.68□□□□□ -0.22
TPT1-214ENST00000616577 FOXD1Q16676 465 aa13.67□□□□□ -0.22
TPT1-214ENST00000616577 CUX2O14529 1486 aa13.67□□□□□ -0.22
TPT1-214ENST00000616577 RAB3GAP2Q9H2M9 1393 aa13.67□□□□□ -0.22
TPT1-214ENST00000616577 CFAP53Q96M91 514 aa13.66□□□□□ -0.22
TPT1-214ENST00000616577 DCAF11Q8TEB1 546 aa13.66□□□□□ -0.22
TPT1-214ENST00000616577 FRAT1Q92837 279 aaPredicted RBP13.66□□□□□ -0.22
TPT1-214ENST00000616577 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
TPT1-214ENST00000616577 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
TPT1-214ENST00000616577 FTSJ3Q8IY81 847 aaKnown RBP13.64□□□□□ -0.23
TPT1-214ENST00000616577 TRIM44Q96DX7 344 aaPredicted RBP13.64□□□□□ -0.23
TPT1-214ENST00000616577 PPP1R15AO75807 674 aaPredicted RBP13.61□□□□□ -0.23
TPT1-214ENST00000616577 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
TPT1-214ENST00000616577 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
TPT1-214ENST00000616577 DEKP35659 375 aaKnown RBP13.6□□□□□ -0.23
TPT1-214ENST00000616577 GOLGA6L22H0YM25 854 aa13.6□□□□□ -0.23
TPT1-214ENST00000616577 ARHGAP35Q9NRY4 1499 aa13.57□□□□□ -0.24
TPT1-214ENST00000616577 TMF1P82094 1093 aa13.57□□□□□ -0.24
TPT1-214ENST00000616577 PKD2Q13563 968 aa13.57□□□□□ -0.24
TPT1-214ENST00000616577 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
TPT1-214ENST00000616577 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
TPT1-214ENST00000616577 ZBTB7CA1YPR0 619 aa13.55□□□□□ -0.24
TPT1-214ENST00000616577 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
TPT1-214ENST00000616577 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
TPT1-214ENST00000616577 U2SURPO15042 1029 aaKnown RBP13.54□□□□□ -0.24
TPT1-214ENST00000616577 TPRNQ4KMQ1 711 aa13.53□□□□□ -0.24
TPT1-214ENST00000616577 NUDCQ9Y266 331 aa13.53□□□□□ -0.24
TPT1-214ENST00000616577 EIF4G1Q04637 1599 aaKnown RBP13.52□□□□□ -0.24
TPT1-214ENST00000616577 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
TPT1-214ENST00000616577 DHX57Q6P158 1386 aaKnown RBP13.51□□□□□ -0.25
TPT1-214ENST00000616577 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
TPT1-214ENST00000616577 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
TPT1-214ENST00000616577 POGKQ9P215 609 aa13.49□□□□□ -0.25
TPT1-214ENST00000616577 NAP1L5Q96NT1 182 aaPredicted RBP13.49□□□□□ -0.25
TPT1-214ENST00000616577 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
TPT1-214ENST00000616577 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
TPT1-214ENST00000616577 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
TPT1-214ENST00000616577 WIZO95785 1651 aa13.47□□□□□ -0.25
TPT1-214ENST00000616577 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
TPT1-214ENST00000616577 HSP90AB1P08238 724 aaKnown RBP13.46□□□□□ -0.25
TPT1-214ENST00000616577 CASC1Q6TDU7 716 aa13.46□□□□□ -0.25
TPT1-214ENST00000616577 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
TPT1-214ENST00000616577 MORC1Q86VD1 984 aa13.45□□□□□ -0.26
TPT1-214ENST00000616577 MS4A1P11836 297 aa13.44□□□□□ -0.26
TPT1-214ENST00000616577 SAFB2Q14151 953 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPT1-214ENST00000616577 DNTTIP2Q5QJE6 756 aaKnown RBP13.44□□□□□ -0.26
TPT1-214ENST00000616577 NUP155O75694 1391 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms