RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
MALAT1-208ENST00000616527 PLCD3Q8N3E9 789 aa13.43□□□□□ -0.26
MALAT1-208ENST00000616527 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
MALAT1-208ENST00000616527 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
MALAT1-208ENST00000616527 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
MALAT1-208ENST00000616527 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
MALAT1-208ENST00000616527 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
MALAT1-208ENST00000616527 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
MALAT1-208ENST00000616527 GABBR2O75899 941 aa13.34□□□□□ -0.27
MALAT1-208ENST00000616527 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
MALAT1-208ENST00000616527 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
MALAT1-208ENST00000616527 CLCN6P51797 869 aa13.31□□□□□ -0.28
MALAT1-208ENST00000616527 SMARCA4P51532 1647 aa13.29□□□□□ -0.28
MALAT1-208ENST00000616527 VASPP50552 380 aaPredicted RBP13.27□□□□□ -0.29
MALAT1-208ENST00000616527 PEG3Q9GZU2 1588 aa13.24□□□□□ -0.29
MALAT1-208ENST00000616527 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
MALAT1-208ENST00000616527 WIZO95785 1651 aa13.21□□□□□ -0.29
MALAT1-208ENST00000616527 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
MALAT1-208ENST00000616527 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
MALAT1-208ENST00000616527 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
MALAT1-208ENST00000616527 NUBP1P53384 320 aa13.19□□□□□ -0.3
MALAT1-208ENST00000616527 CCDC61Q9Y6R9 512 aa13.16□□□□□ -0.3
MALAT1-208ENST00000616527 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
MALAT1-208ENST00000616527 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
MALAT1-208ENST00000616527 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
MALAT1-208ENST00000616527 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
MALAT1-208ENST00000616527 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
MALAT1-208ENST00000616527 IFNLR1Q8IU57 520 aaPredicted RBP13.07□□□□□ -0.32
MALAT1-208ENST00000616527 KIF12Q96FN5 646 aa13.06□□□□□ -0.32
MALAT1-208ENST00000616527 DCBLD2Q96PD2 775 aa13.06□□□□□ -0.32
MALAT1-208ENST00000616527 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
MALAT1-208ENST00000616527 CCDC88BA6NC98 1476 aa13.05□□□□□ -0.32
MALAT1-208ENST00000616527 POTEIP0CG38 1075 aa13.05□□□□□ -0.32
MALAT1-208ENST00000616527 MS4A3Q96HJ5 214 aa13.04□□□□□ -0.32
MALAT1-208ENST00000616527 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
MALAT1-208ENST00000616527 NCAPD3P42695 1498 aa13.02□□□□□ -0.33
MALAT1-208ENST00000616527 EIF4G1Q04637 1599 aaKnown RBP13.02□□□□□ -0.33
MALAT1-208ENST00000616527 MAP3K13O43283 966 aa13□□□□□ -0.33
MALAT1-208ENST00000616527 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
MALAT1-208ENST00000616527 SPOCK2Q92563 424 aa12.98□□□□□ -0.33
MALAT1-208ENST00000616527 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
MALAT1-208ENST00000616527 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
MALAT1-208ENST00000616527 GSE1Q14687 1217 aa12.96□□□□□ -0.33
MALAT1-208ENST00000616527 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
MALAT1-208ENST00000616527 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
MALAT1-208ENST00000616527 PCDHB13Q9Y5F0 798 aa12.92□□□□□ -0.34
MALAT1-208ENST00000616527 PYGBP11216 843 aa12.89□□□□□ -0.35
MALAT1-208ENST00000616527 ASTLQ6HA08 431 aaPredicted RBP12.89□□□□□ -0.35
MALAT1-208ENST00000616527 ATMINO43313 823 aaPredicted RBP12.87□□□□□ -0.35
MALAT1-208ENST00000616527 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
MALAT1-208ENST00000616527 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
MALAT1-208ENST00000616527 TIE1P35590 1138 aa12.84□□□□□ -0.35
MALAT1-208ENST00000616527 CHRM1P11229 460 aaPredicted RBP12.83□□□□□ -0.36
MALAT1-208ENST00000616527 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
MALAT1-208ENST00000616527 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
MALAT1-208ENST00000616527 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
MALAT1-208ENST00000616527 ATN1P54259 1190 aaPredicted RBP12.8□□□□□ -0.36
MALAT1-208ENST00000616527 LHX8Q68G74 356 aa12.8□□□□□ -0.36
MALAT1-208ENST00000616527 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
MALAT1-208ENST00000616527 SLC39A7Q92504 469 aa12.76□□□□□ -0.37
MALAT1-208ENST00000616527 EEA1Q15075 1411 aa12.76□□□□□ -0.37
MALAT1-208ENST00000616527 C7P10643 843 aa12.75□□□□□ -0.37
MALAT1-208ENST00000616527 WRNQ14191 1432 aaPredicted RBP eCLIP12.75□□□□□ -0.37
MALAT1-208ENST00000616527 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
MALAT1-208ENST00000616527 CFTRP13569 1480 aa12.74□□□□□ -0.37
MALAT1-208ENST00000616527 ZNF467Q7Z7K2 595 aaPredicted RBP12.74□□□□□ -0.37
MALAT1-208ENST00000616527 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
MALAT1-208ENST00000616527 CC2D2AQ9P2K1 1620 aa12.71□□□□□ -0.37
MALAT1-208ENST00000616527 LOC105371045A0A1W2PR82 267 aa12.71□□□□□ -0.37
MALAT1-208ENST00000616527 TMEM106CQ9BVX2 250 aa12.71□□□□□ -0.37
MALAT1-208ENST00000616527 ABCC8Q09428 1581 aa12.71□□□□□ -0.37
MALAT1-208ENST00000616527 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
MALAT1-208ENST00000616527 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
MALAT1-208ENST00000616527 POTEB2H3BUK9 544 aa12.63□□□□□ -0.39
MALAT1-208ENST00000616527 IER5LQ5T953 404 aa12.63□□□□□ -0.39
MALAT1-208ENST00000616527 TOP2BQ02880 1626 aa12.62□□□□□ -0.39
MALAT1-208ENST00000616527 SYNJ1O43426 1573 aa12.6□□□□□ -0.39
MALAT1-208ENST00000616527 PSEN1P49768 467 aa12.6□□□□□ -0.39
MALAT1-208ENST00000616527 POTEFA5A3E0 1075 aa12.59□□□□□ -0.39
MALAT1-208ENST00000616527 PDAP1Q13442 181 aaKnown RBP12.59□□□□□ -0.39
MALAT1-208ENST00000616527 SOGA1O94964 1423 aa12.58□□□□□ -0.4
MALAT1-208ENST00000616527 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
MALAT1-208ENST00000616527 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.4
MALAT1-208ENST00000616527 SEC24BO95487 1268 aa12.57□□□□□ -0.4
MALAT1-208ENST00000616527 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
MALAT1-208ENST00000616527 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
MALAT1-208ENST00000616527 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
MALAT1-208ENST00000616527 TNIKQ9UKE5 1360 aa12.54□□□□□ -0.4
MALAT1-208ENST00000616527 CUX1P39880 1505 aa12.52□□□□□ -0.41
MALAT1-208ENST00000616527 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
MALAT1-208ENST00000616527 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
MALAT1-208ENST00000616527 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
MALAT1-208ENST00000616527 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
MALAT1-208ENST00000616527 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
MALAT1-208ENST00000616527 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
MALAT1-208ENST00000616527 GOLGA3Q08378 1498 aa12.49□□□□□ -0.41
MALAT1-208ENST00000616527 CEP164Q9UPV0 1460 aa12.49□□□□□ -0.41
MALAT1-208ENST00000616527 PLCG2P16885 1265 aa12.49□□□□□ -0.41
MALAT1-208ENST00000616527 LAMC3Q9Y6N6 1575 aa12.48□□□□□ -0.41
MALAT1-208ENST00000616527 RUSC2Q8N2Y8 1516 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms