RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 KIF27Q86VH2 1401 aa18.77■□□□□ 0.6
PCDHA11-202ENST00000616325 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.59
PCDHA11-202ENST00000616325 ANP32CO43423 234 aa18.75■□□□□ 0.59
PCDHA11-202ENST00000616325 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
PCDHA11-202ENST00000616325 PRXQ9BXM0 1461 aa18.69■□□□□ 0.58
PCDHA11-202ENST00000616325 HNRNPUQ00839 825 aaKnown RBP eCLIP18.69■□□□□ 0.58
PCDHA11-202ENST00000616325 ANO8Q9HCE9 1232 aaPredicted RBP18.68■□□□□ 0.58
PCDHA11-202ENST00000616325 CUX2O14529 1486 aa18.67■□□□□ 0.58
PCDHA11-202ENST00000616325 ARHGAP35Q9NRY4 1499 aa18.67■□□□□ 0.58
PCDHA11-202ENST00000616325 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
PCDHA11-202ENST00000616325 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
PCDHA11-202ENST00000616325 RRBP1Q9P2E9 1410 aaKnown RBP18.64■□□□□ 0.57
PCDHA11-202ENST00000616325 PHLDB1Q86UU1 1377 aa18.64■□□□□ 0.57
PCDHA11-202ENST00000616325 CHIC2Q9UKJ5 165 aa18.63■□□□□ 0.57
PCDHA11-202ENST00000616325 SETD5Q9C0A6 1442 aa18.63■□□□□ 0.57
PCDHA11-202ENST00000616325 CUX1P39880 1505 aa18.62■□□□□ 0.57
PCDHA11-202ENST00000616325 RTN4Q9NQC3 1192 aaKnown RBP18.61■□□□□ 0.57
PCDHA11-202ENST00000616325 TONSLQ96HA7 1378 aa18.59■□□□□ 0.57
PCDHA11-202ENST00000616325 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
PCDHA11-202ENST00000616325 WDR97A6NE52 1622 aa18.58■□□□□ 0.57
PCDHA11-202ENST00000616325 POLR3GLQ9BT43 218 aa18.58■□□□□ 0.56
PCDHA11-202ENST00000616325 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
PCDHA11-202ENST00000616325 B4GALNT3Q6L9W6 998 aa18.57■□□□□ 0.56
PCDHA11-202ENST00000616325 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
PCDHA11-202ENST00000616325 FANCIQ9NVI1 1328 aa18.56■□□□□ 0.56
PCDHA11-202ENST00000616325 IGF1RP08069 1367 aa18.54■□□□□ 0.56
PCDHA11-202ENST00000616325 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
PCDHA11-202ENST00000616325 FHOD3Q2V2M9 1422 aa18.54■□□□□ 0.56
PCDHA11-202ENST00000616325 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
PCDHA11-202ENST00000616325 PPP1R15AO75807 674 aaPredicted RBP18.53■□□□□ 0.56
PCDHA11-202ENST00000616325 MAPKBP1O60336 1514 aa18.51■□□□□ 0.55
PCDHA11-202ENST00000616325 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
PCDHA11-202ENST00000616325 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
PCDHA11-202ENST00000616325 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
PCDHA11-202ENST00000616325 FOXD1Q16676 465 aa18.48■□□□□ 0.55
PCDHA11-202ENST00000616325 PAK3O75914 559 aaPredicted RBP18.46■□□□□ 0.55
PCDHA11-202ENST00000616325 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.45■□□□□ 0.54
PCDHA11-202ENST00000616325 NOP58Q9Y2X3 529 aaKnown RBP18.45■□□□□ 0.54
PCDHA11-202ENST00000616325 MTUS2Q5JR59 1369 aa18.44■□□□□ 0.54
PCDHA11-202ENST00000616325 CCER2I3L3R5 266 aa18.44■□□□□ 0.54
PCDHA11-202ENST00000616325 LRRC9Q6ZRR7 1453 aa18.44■□□□□ 0.54
PCDHA11-202ENST00000616325 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
PCDHA11-202ENST00000616325 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
PCDHA11-202ENST00000616325 ZNF326Q5BKZ1 582 aaKnown RBP18.41■□□□□ 0.54
PCDHA11-202ENST00000616325 PPP4R2Q9NY27 417 aa18.4■□□□□ 0.54
PCDHA11-202ENST00000616325 TIAM1Q13009 1591 aa18.39■□□□□ 0.53
PCDHA11-202ENST00000616325 IL27Q8NEV9 243 aa18.37■□□□□ 0.53
PCDHA11-202ENST00000616325 FGD5Q6ZNL6 1462 aa18.37■□□□□ 0.53
PCDHA11-202ENST00000616325 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
PCDHA11-202ENST00000616325 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
PCDHA11-202ENST00000616325 CCDC184Q52MB2 194 aa18.35■□□□□ 0.53
PCDHA11-202ENST00000616325 FHAD1B1AJZ9 1412 aa18.35■□□□□ 0.53
PCDHA11-202ENST00000616325 CFTRP13569 1480 aa18.35■□□□□ 0.53
PCDHA11-202ENST00000616325 HSPA5P11021 654 aaKnown RBP18.35■□□□□ 0.53
PCDHA11-202ENST00000616325 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
PCDHA11-202ENST00000616325 ANP32AP39687 249 aaKnown RBP18.32■□□□□ 0.52
PCDHA11-202ENST00000616325 ZBTB47Q9UFB7 747 aaPredicted RBP18.32■□□□□ 0.52
PCDHA11-202ENST00000616325 MRS2Q9HD23 443 aa18.31■□□□□ 0.52
PCDHA11-202ENST00000616325 EIF5BO60841 1220 aaKnown RBP18.29■□□□□ 0.52
PCDHA11-202ENST00000616325 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
PCDHA11-202ENST00000616325 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
PCDHA11-202ENST00000616325 PCF11O94913 1555 aaKnown RBP18.28■□□□□ 0.52
PCDHA11-202ENST00000616325 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
PCDHA11-202ENST00000616325 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
PCDHA11-202ENST00000616325 EIF4G2P78344 907 aaKnown RBP eCLIP18.25■□□□□ 0.51
PCDHA11-202ENST00000616325 WASHC2AQ641Q2 1341 aa18.24■□□□□ 0.51
PCDHA11-202ENST00000616325 TIMELESSQ9UNS1 1208 aa18.24■□□□□ 0.51
PCDHA11-202ENST00000616325 PTPRKQ15262 1439 aa18.22■□□□□ 0.51
PCDHA11-202ENST00000616325 FGD6Q6ZV73 1430 aa18.22■□□□□ 0.51
PCDHA11-202ENST00000616325 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.51
PCDHA11-202ENST00000616325 C11orf95C9JLR9 678 aaPredicted RBP18.19■□□□□ 0.5
PCDHA11-202ENST00000616325 ZNF777Q9ULD5 760 aaPredicted RBP18.18■□□□□ 0.5
PCDHA11-202ENST00000616325 AQRO60306 1485 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCDHA11-202ENST00000616325 IPO9Q96P70 1041 aaKnown RBP18.17■□□□□ 0.5
PCDHA11-202ENST00000616325 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
PCDHA11-202ENST00000616325 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
PCDHA11-202ENST00000616325 NESP48681 1621 aa18.15■□□□□ 0.5
PCDHA11-202ENST00000616325 NEFMP07197 916 aa18.15■□□□□ 0.5
PCDHA11-202ENST00000616325 MPHOSPH9Q99550 1183 aa18.14■□□□□ 0.49
PCDHA11-202ENST00000616325 SLC4A1APQ9BWU0 796 aaKnown RBP18.13■□□□□ 0.49
PCDHA11-202ENST00000616325 UACAQ9BZF9 1416 aa18.11■□□□□ 0.49
PCDHA11-202ENST00000616325 CASKIN1Q8WXD9 1431 aa18.1■□□□□ 0.49
PCDHA11-202ENST00000616325 ERICH6BQ5W0A0 696 aa18.09■□□□□ 0.49
PCDHA11-202ENST00000616325 FMN1Q68DA7 1419 aa18.09■□□□□ 0.49
PCDHA11-202ENST00000616325 PRKRIP1Q9H875 184 aaPredicted RBP18.09■□□□□ 0.49
PCDHA11-202ENST00000616325 NAIPQ13075 1403 aa18.09■□□□□ 0.49
PCDHA11-202ENST00000616325 ZNF644Q9H582 1327 aaPredicted RBP18.08■□□□□ 0.48
PCDHA11-202ENST00000616325 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
PCDHA11-202ENST00000616325 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
PCDHA11-202ENST00000616325 NBPF8Q3BBV2 869 aa18.06■□□□□ 0.48
PCDHA11-202ENST00000616325 KDM2AQ9Y2K7 1162 aa18.06■□□□□ 0.48
PCDHA11-202ENST00000616325 FYCO1Q9BQS8 1478 aa18.06■□□□□ 0.48
PCDHA11-202ENST00000616325 HFM1A2PYH4 1435 aa18.05■□□□□ 0.48
PCDHA11-202ENST00000616325 POLA1P09884 1462 aaPredicted RBP18.05■□□□□ 0.48
PCDHA11-202ENST00000616325 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
PCDHA11-202ENST00000616325 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
PCDHA11-202ENST00000616325 FBLN2P98095 1184 aa18.01■□□□□ 0.47
PCDHA11-202ENST00000616325 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
PCDHA11-202ENST00000616325 KIF7Q2M1P5 1343 aa17.98■□□□□ 0.47
PCDHA11-202ENST00000616325 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms