RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 FKBP8Q14318 412 aa12.22□□□□□ -0.45
COL12A1-211ENST00000615798 NRDCO43847 1150 aa12.22□□□□□ -0.45
COL12A1-211ENST00000615798 L1TD1Q5T7N2 865 aaKnown RBP12.2□□□□□ -0.46
COL12A1-211ENST00000615798 PNNQ9H307 717 aaKnown RBP12.19□□□□□ -0.46
COL12A1-211ENST00000615798 A0A0U1RQG5 324 aaPredicted RBP12.18□□□□□ -0.46
COL12A1-211ENST00000615798 ZRSR1Q15695 479 aaKnown RBP12.18□□□□□ -0.46
COL12A1-211ENST00000615798 STK11IPQ8N1F8 1099 aa12.18□□□□□ -0.46
COL12A1-211ENST00000615798 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL12A1-211ENST00000615798 BAZ1BQ9UIG0 1483 aaKnown RBP12.17□□□□□ -0.46
COL12A1-211ENST00000615798 TONSLQ96HA7 1378 aa12.16□□□□□ -0.46
COL12A1-211ENST00000615798 MSNP26038 577 aaKnown RBP12.16□□□□□ -0.46
COL12A1-211ENST00000615798 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
COL12A1-211ENST00000615798 TIMELESSQ9UNS1 1208 aa12.14□□□□□ -0.47
COL12A1-211ENST00000615798 KIF27Q86VH2 1401 aa12.14□□□□□ -0.47
COL12A1-211ENST00000615798 USP35Q9P2H5 1018 aa12.13□□□□□ -0.47
COL12A1-211ENST00000615798 CCDC136Q96JN2 1154 aa12.13□□□□□ -0.47
COL12A1-211ENST00000615798 SMARCA2P51531 1590 aa12.12□□□□□ -0.47
COL12A1-211ENST00000615798 TRIM52Q96A61 297 aa12.12□□□□□ -0.47
COL12A1-211ENST00000615798 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.12□□□□□ -0.47
COL12A1-211ENST00000615798 DEKP35659 375 aaKnown RBP12.12□□□□□ -0.47
COL12A1-211ENST00000615798 HSP90AA2PQ14568 343 aaPredicted RBP12.11□□□□□ -0.47
COL12A1-211ENST00000615798 GOLGA6L1Q8N7Z2 621 aa12.1□□□□□ -0.47
COL12A1-211ENST00000615798 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
COL12A1-211ENST00000615798 RSPH6AQ9H0K4 717 aa12.1□□□□□ -0.47
COL12A1-211ENST00000615798 TOP2AP11388 1531 aaKnown RBP12.1□□□□□ -0.47
COL12A1-211ENST00000615798 VSIG10Q8N0Z9 540 aa12.07□□□□□ -0.48
COL12A1-211ENST00000615798 LAS1LQ9Y4W2 734 aaKnown RBP12.06□□□□□ -0.48
COL12A1-211ENST00000615798 NEUROD1Q13562 356 aa12.06□□□□□ -0.48
COL12A1-211ENST00000615798 PKNOX2Q96KN3 472 aa12.05□□□□□ -0.48
COL12A1-211ENST00000615798 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
COL12A1-211ENST00000615798 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
COL12A1-211ENST00000615798 VPS8Q8N3P4 1428 aa12.03□□□□□ -0.48
COL12A1-211ENST00000615798 ARID4BQ4LE39 1312 aaPredicted RBP12.02□□□□□ -0.49
COL12A1-211ENST00000615798 MTUS2Q5JR59 1369 aa12.01□□□□□ -0.49
COL12A1-211ENST00000615798 NEFHP12036 1026 aa12.01□□□□□ -0.49
COL12A1-211ENST00000615798 GOLGA6L4A6NEF3 574 aa12.01□□□□□ -0.49
COL12A1-211ENST00000615798 NOC3LQ8WTT2 800 aaKnown RBP12□□□□□ -0.49
COL12A1-211ENST00000615798 GOLGA6L3A6NEY3 463 aa11.98□□□□□ -0.49
COL12A1-211ENST00000615798 MEX3CQ5U5Q3 659 aaKnown RBP11.98□□□□□ -0.49
COL12A1-211ENST00000615798 MROH2BQ7Z745 1585 aa11.98□□□□□ -0.49
COL12A1-211ENST00000615798 KIAA2012Q0VF49 1180 aa11.98□□□□□ -0.49
COL12A1-211ENST00000615798 MYH16Q9H6N6 1097 aa11.96□□□□□ -0.49
COL12A1-211ENST00000615798 ARID3AQ99856 593 aa11.96□□□□□ -0.5
COL12A1-211ENST00000615798 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
COL12A1-211ENST00000615798 NOM1Q5C9Z4 860 aaKnown RBP11.94□□□□□ -0.5
COL12A1-211ENST00000615798 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
COL12A1-211ENST00000615798 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
COL12A1-211ENST00000615798 CCNB3Q8WWL7 1395 aa11.92□□□□□ -0.5
COL12A1-211ENST00000615798 ZNF771Q7L3S4 317 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-211ENST00000615798 DRC7Q8IY82 874 aa11.91□□□□□ -0.5
COL12A1-211ENST00000615798 RRP12Q5JTH9 1297 aaKnown RBP11.9□□□□□ -0.51
COL12A1-211ENST00000615798 CASC1Q6TDU7 716 aa11.89□□□□□ -0.51
COL12A1-211ENST00000615798 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
COL12A1-211ENST00000615798 EIF4G2P78344 907 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL12A1-211ENST00000615798 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-211ENST00000615798 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL12A1-211ENST00000615798 HMGB1P09429 215 aaKnown RBP11.87□□□□□ -0.51
COL12A1-211ENST00000615798 HAP1P54257 671 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-211ENST00000615798 WIZO95785 1651 aa11.85□□□□□ -0.51
COL12A1-211ENST00000615798 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
COL12A1-211ENST00000615798 CCER2I3L3R5 266 aa11.84□□□□□ -0.51
COL12A1-211ENST00000615798 TEX35Q5T0J7 233 aa11.83□□□□□ -0.51
COL12A1-211ENST00000615798 HSP90AB1P08238 724 aaKnown RBP11.82□□□□□ -0.52
COL12A1-211ENST00000615798 MIER1Q8N108 512 aa11.82□□□□□ -0.52
COL12A1-211ENST00000615798 TSPY4P0CV99 314 aa11.82□□□□□ -0.52
COL12A1-211ENST00000615798 TSPY10P0CW01 314 aa11.82□□□□□ -0.52
COL12A1-211ENST00000615798 ARHGAP35Q9NRY4 1499 aa11.82□□□□□ -0.52
COL12A1-211ENST00000615798 HTATSF1O43719 755 aaKnown RBP11.82□□□□□ -0.52
COL12A1-211ENST00000615798 DDX10Q13206 875 aaKnown RBP11.81□□□□□ -0.52
COL12A1-211ENST00000615798 PATL2C9JE40 543 aaKnown RBP11.8□□□□□ -0.52
COL12A1-211ENST00000615798 GPS2Q13227 327 aa11.8□□□□□ -0.52
COL12A1-211ENST00000615798 SETD5Q9C0A6 1442 aa11.79□□□□□ -0.52
COL12A1-211ENST00000615798 CDCA8Q53HL2 280 aa11.79□□□□□ -0.52
COL12A1-211ENST00000615798 SOGA1O94964 1423 aa11.79□□□□□ -0.52
COL12A1-211ENST00000615798 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
COL12A1-211ENST00000615798 P3H3Q8IVL6 736 aa11.78□□□□□ -0.52
COL12A1-211ENST00000615798 TMC1Q8TDI8 760 aa11.78□□□□□ -0.52
COL12A1-211ENST00000615798 ABCC8Q09428 1581 aa11.77□□□□□ -0.52
COL12A1-211ENST00000615798 PDE4CQ08493 712 aa11.77□□□□□ -0.53
COL12A1-211ENST00000615798 RDXP35241 583 aaKnown RBP11.77□□□□□ -0.53
COL12A1-211ENST00000615798 CWC15Q9P013 229 aaKnown RBP11.77□□□□□ -0.53
COL12A1-211ENST00000615798 CARMIL1Q5VZK9 1371 aa11.76□□□□□ -0.53
COL12A1-211ENST00000615798 KIF21BO75037 1637 aa11.76□□□□□ -0.53
COL12A1-211ENST00000615798 HSP90B1P14625 803 aaKnown RBP11.75□□□□□ -0.53
COL12A1-211ENST00000615798 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
COL12A1-211ENST00000615798 MRS2Q9HD23 443 aa11.75□□□□□ -0.53
COL12A1-211ENST00000615798 HSCBQ8IWL3 235 aa11.74□□□□□ -0.53
COL12A1-211ENST00000615798 CUX2O14529 1486 aa11.74□□□□□ -0.53
COL12A1-211ENST00000615798 CCDC191Q8NCU4 936 aa11.74□□□□□ -0.53
COL12A1-211ENST00000615798 HMMRO75330 724 aa11.74□□□□□ -0.53
COL12A1-211ENST00000615798 ERICH3Q5RHP9 1530 aa11.73□□□□□ -0.53
COL12A1-211ENST00000615798 CCDC66A2RUB6 948 aa11.73□□□□□ -0.53
COL12A1-211ENST00000615798 GBP4Q96PP9 640 aa11.73□□□□□ -0.53
COL12A1-211ENST00000615798 MAP7D2Q96T17 732 aa11.73□□□□□ -0.53
COL12A1-211ENST00000615798 SYAP1Q96A49 352 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-211ENST00000615798 MTERF4Q7Z6M4 381 aaKnown RBP11.72□□□□□ -0.53
COL12A1-211ENST00000615798 CALD1Q05682 793 aaKnown RBP11.71□□□□□ -0.53
COL12A1-211ENST00000615798 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-211ENST00000615798 ZNF526Q8TF50 670 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-211ENST00000615798 RAPGEF2Q9Y4G8 1499 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms