RNA–Protein interactions for RNA: ENST00000615587.4

LRRC41-206, Transcript of leucine rich repeat containing 41, humanhuman

TSL 1 (best) BASIC

Gene LRRC41, Length 2,842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-206ENST00000615587 RAPGEF2Q9Y4G8 1499 aa17.98■□□□□ 0.47
LRRC41-206ENST00000615587 ERICH6BQ5W0A0 696 aa17.98■□□□□ 0.47
LRRC41-206ENST00000615587 PPP4R2Q9NY27 417 aa17.96■□□□□ 0.47
LRRC41-206ENST00000615587 RAB3GAP2Q9H2M9 1393 aa17.94■□□□□ 0.46
LRRC41-206ENST00000615587 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
LRRC41-206ENST00000615587 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
LRRC41-206ENST00000615587 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
LRRC41-206ENST00000615587 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
LRRC41-206ENST00000615587 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
LRRC41-206ENST00000615587 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
LRRC41-206ENST00000615587 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
LRRC41-206ENST00000615587 RRBP1Q9P2E9 1410 aaKnown RBP17.87■□□□□ 0.45
LRRC41-206ENST00000615587 UBE2Q2Q8WVN8 375 aa17.85■□□□□ 0.45
LRRC41-206ENST00000615587 CUX2O14529 1486 aa17.84■□□□□ 0.45
LRRC41-206ENST00000615587 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
LRRC41-206ENST00000615587 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
LRRC41-206ENST00000615587 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
LRRC41-206ENST00000615587 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
LRRC41-206ENST00000615587 ANP32AP39687 249 aaKnown RBP17.79■□□□□ 0.44
LRRC41-206ENST00000615587 CCDC184Q52MB2 194 aa17.79■□□□□ 0.44
LRRC41-206ENST00000615587 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
LRRC41-206ENST00000615587 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
LRRC41-206ENST00000615587 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.44
LRRC41-206ENST00000615587 LAS1LQ9Y4W2 734 aaKnown RBP17.74■□□□□ 0.43
LRRC41-206ENST00000615587 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
LRRC41-206ENST00000615587 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
LRRC41-206ENST00000615587 FAM50AQ14320 339 aaKnown RBP17.71■□□□□ 0.43
LRRC41-206ENST00000615587 NPM2Q86SE8 214 aaKnown RBP17.71■□□□□ 0.43
LRRC41-206ENST00000615587 NEFMP07197 916 aa17.69■□□□□ 0.42
LRRC41-206ENST00000615587 BRPF3Q9ULD4 1205 aa17.69■□□□□ 0.42
LRRC41-206ENST00000615587 WASHC2AQ641Q2 1341 aa17.67■□□□□ 0.42
LRRC41-206ENST00000615587 SENP3-EIF4A1A0A087X0R7 540 aa17.65■□□□□ 0.42
LRRC41-206ENST00000615587 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
LRRC41-206ENST00000615587 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
LRRC41-206ENST00000615587 MRS2Q9HD23 443 aa17.58■□□□□ 0.41
LRRC41-206ENST00000615587 AKNAQ7Z591 1439 aa17.57■□□□□ 0.4
LRRC41-206ENST00000615587 CNGB1Q14028 1251 aaPredicted RBP17.57■□□□□ 0.4
LRRC41-206ENST00000615587 ZBED9Q6R2W3 1325 aa17.54■□□□□ 0.4
LRRC41-206ENST00000615587 WASHC2CQ9Y4E1 1318 aa17.54■□□□□ 0.4
LRRC41-206ENST00000615587 PHLDB1Q86UU1 1377 aa17.54■□□□□ 0.4
LRRC41-206ENST00000615587 C11orf95C9JLR9 678 aaPredicted RBP17.53■□□□□ 0.4
LRRC41-206ENST00000615587 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
LRRC41-206ENST00000615587 HSPA5P11021 654 aaKnown RBP17.52■□□□□ 0.4
LRRC41-206ENST00000615587 PRKRIP1Q9H875 184 aaPredicted RBP17.48■□□□□ 0.39
LRRC41-206ENST00000615587 ATP1B4Q9UN42 357 aaPredicted RBP17.48■□□□□ 0.39
LRRC41-206ENST00000615587 PRXQ9BXM0 1461 aa17.48■□□□□ 0.39
LRRC41-206ENST00000615587 ARHGAP35Q9NRY4 1499 aa17.48■□□□□ 0.39
LRRC41-206ENST00000615587 USP35Q9P2H5 1018 aa17.47■□□□□ 0.39
LRRC41-206ENST00000615587 PKNOX2Q96KN3 472 aa17.45■□□□□ 0.38
LRRC41-206ENST00000615587 GSE1Q14687 1217 aa17.45■□□□□ 0.38
LRRC41-206ENST00000615587 PDE4AP27815 886 aa17.42■□□□□ 0.38
LRRC41-206ENST00000615587 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
LRRC41-206ENST00000615587 ERICH3Q5RHP9 1530 aa17.41■□□□□ 0.38
LRRC41-206ENST00000615587 PPM1GO15355 546 aaPredicted RBP17.4■□□□□ 0.38
LRRC41-206ENST00000615587 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
LRRC41-206ENST00000615587 NUDCQ9Y266 331 aa17.39■□□□□ 0.37
LRRC41-206ENST00000615587 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.37
LRRC41-206ENST00000615587 CNTLNQ9NXG0 1405 aa17.38■□□□□ 0.37
LRRC41-206ENST00000615587 ATAD2BQ9ULI0 1458 aa17.38■□□□□ 0.37
LRRC41-206ENST00000615587 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
LRRC41-206ENST00000615587 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
LRRC41-206ENST00000615587 SKAP1Q86WV1 359 aa17.37■□□□□ 0.37
LRRC41-206ENST00000615587 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
LRRC41-206ENST00000615587 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
LRRC41-206ENST00000615587 NFKBIBQ15653 356 aa17.36■□□□□ 0.37
LRRC41-206ENST00000615587 SMG6Q86US8 1419 aaKnown RBP17.36■□□□□ 0.37
LRRC41-206ENST00000615587 TIAM1Q13009 1591 aa17.35■□□□□ 0.37
LRRC41-206ENST00000615587 BACH2Q9BYV9 841 aa17.34■□□□□ 0.37
LRRC41-206ENST00000615587 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
LRRC41-206ENST00000615587 EXOC6Q8TAG9 804 aa17.34■□□□□ 0.37
LRRC41-206ENST00000615587 PEG3Q9GZU2 1588 aa17.33■□□□□ 0.36
LRRC41-206ENST00000615587 RSPH6AQ9H0K4 717 aa17.31■□□□□ 0.36
LRRC41-206ENST00000615587 TCERG1O14776 1098 aaKnown RBP17.3■□□□□ 0.36
LRRC41-206ENST00000615587 DCAF11Q8TEB1 546 aa17.3■□□□□ 0.36
LRRC41-206ENST00000615587 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
LRRC41-206ENST00000615587 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
LRRC41-206ENST00000615587 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
LRRC41-206ENST00000615587 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
LRRC41-206ENST00000615587 CCDC18Q5T9S5 1454 aa17.28■□□□□ 0.36
LRRC41-206ENST00000615587 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.361e-7■■■■■ 32.5
LRRC41-206ENST00000615587 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
LRRC41-206ENST00000615587 VSIG10Q8N0Z9 540 aa17.24■□□□□ 0.35
LRRC41-206ENST00000615587 UACAQ9BZF9 1416 aa17.23■□□□□ 0.35
LRRC41-206ENST00000615587 FRAT2O75474 233 aaPredicted RBP17.22■□□□□ 0.35
LRRC41-206ENST00000615587 FAM43AQ8N2R8 423 aa17.22■□□□□ 0.35
LRRC41-206ENST00000615587 ZMYND15Q9H091 742 aa17.21■□□□□ 0.35
LRRC41-206ENST00000615587 KIF7Q2M1P5 1343 aa17.21■□□□□ 0.35
LRRC41-206ENST00000615587 PTPRKQ15262 1439 aa17.21■□□□□ 0.35
LRRC41-206ENST00000615587 KIF27Q86VH2 1401 aa17.21■□□□□ 0.35
LRRC41-206ENST00000615587 L3MBTL2Q969R5 705 aa17.2■□□□□ 0.34
LRRC41-206ENST00000615587 NCOA1Q15788 1441 aa17.2■□□□□ 0.34
LRRC41-206ENST00000615587 RRP1P56182 461 aaKnown RBP17.2■□□□□ 0.34
LRRC41-206ENST00000615587 FOXD1Q16676 465 aa17.2■□□□□ 0.34
LRRC41-206ENST00000615587 DAXXQ9UER7 740 aaPredicted RBP17.19■□□□□ 0.34
LRRC41-206ENST00000615587 DDRGK1Q96HY6 314 aa17.18■□□□□ 0.34
LRRC41-206ENST00000615587 MAP3K1Q13233 1512 aa17.18■□□□□ 0.34
LRRC41-206ENST00000615587 MS4A1P11836 297 aa17.16■□□□□ 0.34
LRRC41-206ENST00000615587 RRP7BPQ9NSQ0 103 aa17.16■□□□□ 0.34
LRRC41-206ENST00000615587 RRAGDQ9NQL2 400 aaPredicted RBP17.16■□□□□ 0.34
LRRC41-206ENST00000615587 CUX1P39880 1505 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms