RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 P3H3Q8IVL6 736 aa29.22■■■□□ 2.27
MMP28-204ENST00000615136 ZNF608Q9ULD9 1512 aaPredicted RBP29.22■■■□□ 2.27
MMP28-204ENST00000615136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.2■■■□□ 2.26
MMP28-204ENST00000615136 THOC2Q8NI27 1593 aaKnown RBP29.2■■■□□ 2.26
MMP28-204ENST00000615136 IFT140Q96RY7 1462 aa29.18■■■□□ 2.26
MMP28-204ENST00000615136 FHOD3Q2V2M9 1422 aa29.15■■■□□ 2.26
MMP28-204ENST00000615136 ADAMTS12P58397 1594 aa29.11■■■□□ 2.25
MMP28-204ENST00000615136 EFCAB5A4FU69 1503 aa29.11■■■□□ 2.25
MMP28-204ENST00000615136 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
MMP28-204ENST00000615136 FHAD1B1AJZ9 1412 aa29.09■■■□□ 2.25
MMP28-204ENST00000615136 PCF11O94913 1555 aaKnown RBP29.07■■■□□ 2.24
MMP28-204ENST00000615136 HNRNPUL2Q1KMD3 747 aaKnown RBP29.04■■■□□ 2.24
MMP28-204ENST00000615136 TIAM1Q13009 1591 aa29.04■■■□□ 2.24
MMP28-204ENST00000615136 EIF4G3O43432 1585 aaKnown RBP29.03■■■□□ 2.24
MMP28-204ENST00000615136 CCER1Q8TC90 406 aaPredicted RBP29.01■■■□□ 2.24
MMP28-204ENST00000615136 SAMD9Q5K651 1589 aa29.01■■■□□ 2.23
MMP28-204ENST00000615136 MAP3K1Q13233 1512 aa28.98■■■□□ 2.23
MMP28-204ENST00000615136 SNAPC4Q5SXM2 1469 aa28.95■■■□□ 2.22
MMP28-204ENST00000615136 ATP1B4Q9UN42 357 aaPredicted RBP28.93■■■□□ 2.22
MMP28-204ENST00000615136 CFAP43Q8NDM7 1665 aa28.92■■■□□ 2.22
MMP28-204ENST00000615136 CASKIN1Q8WXD9 1431 aa28.91■■■□□ 2.22
MMP28-204ENST00000615136 LRRC9Q6ZRR7 1453 aa28.91■■■□□ 2.22
MMP28-204ENST00000615136 FYCO1Q9BQS8 1478 aa28.91■■■□□ 2.22
MMP28-204ENST00000615136 RRBP1Q9P2E9 1410 aaKnown RBP28.89■■■□□ 2.22
MMP28-204ENST00000615136 IQGAP2Q13576 1575 aa28.87■■■□□ 2.21
MMP28-204ENST00000615136 FMN1Q68DA7 1419 aa28.87■■■□□ 2.21
MMP28-204ENST00000615136 GRIN2AQ12879 1464 aa28.8■■■□□ 2.2
MMP28-204ENST00000615136 LRRIQ1Q96JM4 1722 aa28.8■■■□□ 2.2
MMP28-204ENST00000615136 CCNB3Q8WWL7 1395 aa28.78■■■□□ 2.2
MMP28-204ENST00000615136 PHLDB1Q86UU1 1377 aa28.77■■■□□ 2.2
MMP28-204ENST00000615136 MAGI1Q96QZ7 1491 aaPredicted RBP28.76■■■□□ 2.19
MMP28-204ENST00000615136 KIAA0586Q9BVV6 1533 aa28.72■■■□□ 2.19
MMP28-204ENST00000615136 UGGT2Q9NYU1 1516 aa28.72■■■□□ 2.19
MMP28-204ENST00000615136 SYNJ2O15056 1496 aa28.7■■■□□ 2.18
MMP28-204ENST00000615136 CHMP7Q8WUX9 453 aaPredicted RBP28.67■■■□□ 2.18
MMP28-204ENST00000615136 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
MMP28-204ENST00000615136 FBLN2P98095 1184 aa28.65■■■□□ 2.18
MMP28-204ENST00000615136 DISP1Q96F81 1524 aa28.64■■■□□ 2.17
MMP28-204ENST00000615136 ITGAEP38570 1179 aa28.63■■■□□ 2.17
MMP28-204ENST00000615136 KIAA0556O60303 1618 aa28.6■■■□□ 2.17
MMP28-204ENST00000615136 MTUS2Q5JR59 1369 aa28.57■■■□□ 2.16
MMP28-204ENST00000615136 MAGI3Q5TCQ9 1506 aa28.55■■■□□ 2.16
MMP28-204ENST00000615136 HECW1Q76N89 1606 aa28.54■■■□□ 2.16
MMP28-204ENST00000615136 NUP160Q12769 1436 aa28.53■■■□□ 2.16
MMP28-204ENST00000615136 FAM50AQ14320 339 aaKnown RBP28.52■■■□□ 2.16
MMP28-204ENST00000615136 EPRSP07814 1512 aaKnown RBP28.49■■■□□ 2.15
MMP28-204ENST00000615136 CDK13Q14004 1512 aaKnown RBP28.49■■■□□ 2.15
MMP28-204ENST00000615136 CCDC18Q5T9S5 1454 aa28.49■■■□□ 2.15
MMP28-204ENST00000615136 ARID3CA6NKF2 412 aa28.48■■■□□ 2.15
MMP28-204ENST00000615136 NCOA2Q15596 1464 aa28.47■■■□□ 2.15
MMP28-204ENST00000615136 EHBP1L1Q8N3D4 1523 aa28.46■■■□□ 2.15
MMP28-204ENST00000615136 DHX57Q6P158 1386 aaKnown RBP28.46■■■□□ 2.15
MMP28-204ENST00000615136 FGD6Q6ZV73 1430 aa28.44■■■□□ 2.14
MMP28-204ENST00000615136 SUPT6HQ7KZ85 1726 aaKnown RBP28.43■■■□□ 2.14
MMP28-204ENST00000615136 JPH4Q96JJ6 628 aa28.4■■■□□ 2.14
MMP28-204ENST00000615136 ARHGEF11O15085 1522 aa28.38■■■□□ 2.13
MMP28-204ENST00000615136 NUP153P49790 1475 aaKnown RBP28.38■■■□□ 2.13
MMP28-204ENST00000615136 RAPGEF6Q8TEU7 1601 aa28.37■■■□□ 2.13
MMP28-204ENST00000615136 RAB3GAP2Q9H2M9 1393 aa28.37■■■□□ 2.13
MMP28-204ENST00000615136 MYOM3Q5VTT5 1437 aa28.36■■■□□ 2.13
MMP28-204ENST00000615136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.35■■■□□ 2.13
MMP28-204ENST00000615136 CHD1O14646 1710 aa28.33■■■□□ 2.13
MMP28-204ENST00000615136 PLB1Q6P1J6 1458 aa28.32■■■□□ 2.12
MMP28-204ENST00000615136 SETD5Q9C0A6 1442 aa28.31■■■□□ 2.12
MMP28-204ENST00000615136 CARMIL2Q6F5E8 1435 aa28.29■■■□□ 2.12
MMP28-204ENST00000615136 PTPRKQ15262 1439 aa28.27■■■□□ 2.12
MMP28-204ENST00000615136 PTPN23Q9H3S7 1636 aa28.24■■■□□ 2.11
MMP28-204ENST00000615136 CLSPNQ9HAW4 1339 aa28.23■■■□□ 2.11
MMP28-204ENST00000615136 DIEXFQ68CQ4 756 aaKnown RBP28.19■■■□□ 2.1
MMP28-204ENST00000615136 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
MMP28-204ENST00000615136 TCOF1Q13428 1488 aaKnown RBP28.15■■■□□ 2.1
MMP28-204ENST00000615136 MAPKBP1O60336 1514 aa28.15■■■□□ 2.1
MMP28-204ENST00000615136 ZNF316A6NFI3 1004 aaPredicted RBP28.14■■■□□ 2.1
MMP28-204ENST00000615136 ABCA8O94911 1581 aa28.14■■■□□ 2.1
MMP28-204ENST00000615136 MIA2Q96PC5 1412 aa28.08■■■□□ 2.09
MMP28-204ENST00000615136 CDK11AQ9UQ88 783 aaPredicted RBP28.08■■■□□ 2.08
MMP28-204ENST00000615136 TROQ12816 1431 aaPredicted RBP28.07■■■□□ 2.08
MMP28-204ENST00000615136 SHROOM2Q13796 1616 aa28.07■■■□□ 2.08
MMP28-204ENST00000615136 HFM1A2PYH4 1435 aa28.07■■■□□ 2.08
MMP28-204ENST00000615136 KIF14Q15058 1648 aa28.05■■■□□ 2.08
MMP28-204ENST00000615136 ERCC6L2Q5T890 1561 aa28.03■■■□□ 2.08
MMP28-204ENST00000615136 PTPRGP23470 1445 aa28.03■■■□□ 2.08
MMP28-204ENST00000615136 NAIPQ13075 1403 aa28.03■■■□□ 2.08
MMP28-204ENST00000615136 ATP10BO94823 1461 aa28.02■■■□□ 2.08
MMP28-204ENST00000615136 CHIC2Q9UKJ5 165 aa28.01■■■□□ 2.07
MMP28-204ENST00000615136 ZNF644Q9H582 1327 aaPredicted RBP28■■■□□ 2.07
MMP28-204ENST00000615136 ADCY10Q96PN6 1610 aa27.98■■■□□ 2.07
MMP28-204ENST00000615136 RRP7BPQ9NSQ0 103 aa27.96■■■□□ 2.07
MMP28-204ENST00000615136 CLASP1Q7Z460 1538 aa27.93■■■□□ 2.06
MMP28-204ENST00000615136 GPATCH8Q9UKJ3 1502 aaKnown RBP27.92■■■□□ 2.06
MMP28-204ENST00000615136 SIN3AQ96ST3 1273 aa27.92■■■□□ 2.06
MMP28-204ENST00000615136 KDM6BO15054 1643 aa27.9■■■□□ 2.06
MMP28-204ENST00000615136 GCC2Q8IWJ2 1684 aa27.89■■■□□ 2.06
MMP28-204ENST00000615136 PLEKHD1A6NEE1 506 aa27.89■■■□□ 2.06
MMP28-204ENST00000615136 DAPK1P53355 1430 aa27.89■■■□□ 2.06
MMP28-204ENST00000615136 DNMT1P26358 1616 aaKnown RBP27.88■■■□□ 2.05
MMP28-204ENST00000615136 ABCC5O15440 1437 aa27.88■■■□□ 2.05
MMP28-204ENST00000615136 ITSN2Q9NZM3 1697 aa27.87■■■□□ 2.05
MMP28-204ENST00000615136 UACAQ9BZF9 1416 aa27.87■■■□□ 2.05
MMP28-204ENST00000615136 CFDP1Q9UEE9 299 aaPredicted RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms