RNA–Protein interactions for RNA: ENST00000615112.4

NCAM1-221, Transcript of neural cell adhesion molecule 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NCAM1, Length 5,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-221ENST00000615112 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
NCAM1-221ENST00000615112 PPP1R15AO75807 674 aaPredicted RBP13.26□□□□□ -0.29
NCAM1-221ENST00000615112 CANXP27824 592 aaKnown RBP13.25□□□□□ -0.29
NCAM1-221ENST00000615112 CCNB3Q8WWL7 1395 aa13.24□□□□□ -0.29
NCAM1-221ENST00000615112 SMARCA4P51532 1647 aa13.22□□□□□ -0.29
NCAM1-221ENST00000615112 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
NCAM1-221ENST00000615112 EIF4G1Q04637 1599 aaKnown RBP13.22□□□□□ -0.29
NCAM1-221ENST00000615112 ARID4BQ4LE39 1312 aaPredicted RBP13.22□□□□□ -0.29
NCAM1-221ENST00000615112 CDCA8Q53HL2 280 aa13.22□□□□□ -0.29
NCAM1-221ENST00000615112 KANK1Q14678 1352 aa13.2□□□□□ -0.3
NCAM1-221ENST00000615112 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
NCAM1-221ENST00000615112 HDGFP51858 240 aaKnown RBP13.19□□□□□ -0.3
NCAM1-221ENST00000615112 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
NCAM1-221ENST00000615112 RRP7BPQ9NSQ0 103 aa13.14□□□□□ -0.31
NCAM1-221ENST00000615112 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
NCAM1-221ENST00000615112 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
NCAM1-221ENST00000615112 NCAPD3P42695 1498 aa13.11□□□□□ -0.31
NCAM1-221ENST00000615112 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
NCAM1-221ENST00000615112 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
NCAM1-221ENST00000615112 EFCAB2Q5VUJ9 269 aa13.1□□□□□ -0.31
NCAM1-221ENST00000615112 C14orf37Q86TY3 774 aa13.09□□□□□ -0.31
NCAM1-221ENST00000615112 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
NCAM1-221ENST00000615112 RSPH4AQ5TD94 716 aa13.09□□□□□ -0.31
NCAM1-221ENST00000615112 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
NCAM1-221ENST00000615112 WIZO95785 1651 aa13.08□□□□□ -0.31
NCAM1-221ENST00000615112 WDR43Q15061 677 aaKnown RBP eCLIP13.08□□□□□ -0.32
NCAM1-221ENST00000615112 VPS8Q8N3P4 1428 aa13.07□□□□□ -0.32
NCAM1-221ENST00000615112 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
NCAM1-221ENST00000615112 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
NCAM1-221ENST00000615112 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
NCAM1-221ENST00000615112 TIMELESSQ9UNS1 1208 aa13.06□□□□□ -0.32
NCAM1-221ENST00000615112 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
NCAM1-221ENST00000615112 RTL5Q5HYW3 569 aaPredicted RBP13.03□□□□□ -0.32
NCAM1-221ENST00000615112 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
NCAM1-221ENST00000615112 CCDC18Q5T9S5 1454 aa13□□□□□ -0.33
NCAM1-221ENST00000615112 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
NCAM1-221ENST00000615112 ANKRD30AQ9BXX3 1397 aa12.98□□□□□ -0.33
NCAM1-221ENST00000615112 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
NCAM1-221ENST00000615112 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
NCAM1-221ENST00000615112 SCAF1Q9H7N4 1312 aaKnown RBP12.97□□□□□ -0.33
NCAM1-221ENST00000615112 POGKQ9P215 609 aa12.97□□□□□ -0.33
NCAM1-221ENST00000615112 DDX10Q13206 875 aaKnown RBP12.96□□□□□ -0.33
NCAM1-221ENST00000615112 RGL3Q3MIN7 710 aa12.96□□□□□ -0.34
NCAM1-221ENST00000615112 CARD11Q9BXL7 1154 aa12.95□□□□□ -0.34
NCAM1-221ENST00000615112 KNSTRNQ9Y448 316 aa12.94□□□□□ -0.34
NCAM1-221ENST00000615112 MRS2Q9HD23 443 aa12.93□□□□□ -0.34
NCAM1-221ENST00000615112 HNRNPUQ00839 825 aaKnown RBP eCLIP12.92□□□□□ -0.34
NCAM1-221ENST00000615112 PTPRGP23470 1445 aa12.92□□□□□ -0.34
NCAM1-221ENST00000615112 NUDCQ9Y266 331 aa12.91□□□□□ -0.34
NCAM1-221ENST00000615112 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
NCAM1-221ENST00000615112 HMGXB3Q12766 1538 aa12.91□□□□□ -0.34
NCAM1-221ENST00000615112 PNNQ9H307 717 aaKnown RBP12.91□□□□□ -0.34
NCAM1-221ENST00000615112 UPF2Q9HAU5 1272 aaKnown RBP12.9□□□□□ -0.34
NCAM1-221ENST00000615112 SETD5Q9C0A6 1442 aa12.9□□□□□ -0.35
NCAM1-221ENST00000615112 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
NCAM1-221ENST00000615112 MYH16Q9H6N6 1097 aa12.89□□□□□ -0.35
NCAM1-221ENST00000615112 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
NCAM1-221ENST00000615112 SPAG9O60271 1321 aaKnown RBP12.87□□□□□ -0.35
NCAM1-221ENST00000615112 TMF1P82094 1093 aa12.87□□□□□ -0.35
NCAM1-221ENST00000615112 EIF5BO60841 1220 aaKnown RBP12.85□□□□□ -0.35
NCAM1-221ENST00000615112 GGT6Q6P531 493 aa12.85□□□□□ -0.35
NCAM1-221ENST00000615112 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
NCAM1-221ENST00000615112 ANP32AP39687 249 aaKnown RBP12.84□□□□□ -0.35
NCAM1-221ENST00000615112 GRIN2BQ13224 1484 aa12.83□□□□□ -0.35
NCAM1-221ENST00000615112 MLECQ14165 292 aa12.83□□□□□ -0.36
NCAM1-221ENST00000615112 CFTRP13569 1480 aa12.83□□□□□ -0.36
NCAM1-221ENST00000615112 FHOD3Q2V2M9 1422 aa12.82□□□□□ -0.36
NCAM1-221ENST00000615112 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
NCAM1-221ENST00000615112 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
NCAM1-221ENST00000615112 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
NCAM1-221ENST00000615112 EID1Q9Y6B2 187 aa12.82□□□□□ -0.36
NCAM1-221ENST00000615112 EIF3AQ14152 1382 aaKnown RBP12.82□□□□□ -0.36
NCAM1-221ENST00000615112 ZBTB7CA1YPR0 619 aa12.81□□□□□ -0.36
NCAM1-221ENST00000615112 NUP155O75694 1391 aa12.8□□□□□ -0.36
NCAM1-221ENST00000615112 DCAF11Q8TEB1 546 aa12.79□□□□□ -0.36
NCAM1-221ENST00000615112 PKD2Q13563 968 aa12.79□□□□□ -0.36
NCAM1-221ENST00000615112 UACAQ9BZF9 1416 aa12.78□□□□□ -0.36
NCAM1-221ENST00000615112 A0A0G2JS52 829 aa12.78□□□□□ -0.36
NCAM1-221ENST00000615112 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
NCAM1-221ENST00000615112 KIF3BO15066 747 aa12.77□□□□□ -0.36
NCAM1-221ENST00000615112 MS4A1P11836 297 aa12.77□□□□□ -0.37
NCAM1-221ENST00000615112 HDGFL2Q7Z4V5 671 aaPredicted RBP12.77□□□□□ -0.37
NCAM1-221ENST00000615112 IGF1RP08069 1367 aa12.77□□□□□ -0.37
NCAM1-221ENST00000615112 CC2D2AQ9P2K1 1620 aa12.77□□□□□ -0.37
NCAM1-221ENST00000615112 BCL11AQ9H165 835 aa12.76□□□□□ -0.37
NCAM1-221ENST00000615112 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
NCAM1-221ENST00000615112 WASHC2CQ9Y4E1 1318 aa12.75□□□□□ -0.37
NCAM1-221ENST00000615112 LMOD2Q6P5Q4 547 aa12.74□□□□□ -0.37
NCAM1-221ENST00000615112 SRPK2P78362 688 aaKnown RBP12.74□□□□□ -0.37
NCAM1-221ENST00000615112 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
NCAM1-221ENST00000615112 CCDC136Q96JN2 1154 aa12.73□□□□□ -0.37
NCAM1-221ENST00000615112 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
NCAM1-221ENST00000615112 CYB5RLQ6IPT4 315 aa12.72□□□□□ -0.37
NCAM1-221ENST00000615112 SALL2Q9Y467 1007 aaPredicted RBP12.71□□□□□ -0.37
NCAM1-221ENST00000615112 CUX1P39880 1505 aa12.71□□□□□ -0.38
NCAM1-221ENST00000615112 KANK4Q5T7N3 995 aaPredicted RBP12.71□□□□□ -0.38
NCAM1-221ENST00000615112 STAC3Q96MF2 364 aa12.71□□□□□ -0.38
NCAM1-221ENST00000615112 RAD54L2Q9Y4B4 1467 aa12.7□□□□□ -0.38
NCAM1-221ENST00000615112 PPM1GO15355 546 aaPredicted RBP12.7□□□□□ -0.38
NCAM1-221ENST00000615112 HNRNPMP52272 730 aaKnown RBP eCLIP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms