RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 TSPY10P0CW01 314 aa5.25□□□□□ -1.57
LTN1-207ENST00000614971 CANXP27824 592 aaKnown RBP5.24□□□□□ -1.57
LTN1-207ENST00000614971 KANK4Q5T7N3 995 aaPredicted RBP5.24□□□□□ -1.57
LTN1-207ENST00000614971 ZBTB7CA1YPR0 619 aa5.23□□□□□ -1.57
LTN1-207ENST00000614971 TDRD9Q8NDG6 1382 aaKnown RBP5.23□□□□□ -1.57
LTN1-207ENST00000614971 CCDC88BA6NC98 1476 aa5.22□□□□□ -1.57
LTN1-207ENST00000614971 MLECQ14165 292 aa5.22□□□□□ -1.57
LTN1-207ENST00000614971 A0A0G2JS52 829 aa5.22□□□□□ -1.57
LTN1-207ENST00000614971 MRS2Q9HD23 443 aa5.21□□□□□ -1.57
LTN1-207ENST00000614971 TNNT2P45379 298 aaPredicted RBP5.21□□□□□ -1.58
LTN1-207ENST00000614971 CFDP1Q9UEE9 299 aaPredicted RBP5.21□□□□□ -1.58
LTN1-207ENST00000614971 PLEKHD1A6NEE1 506 aa5.21□□□□□ -1.58
LTN1-207ENST00000614971 ERCC6Q03468 1493 aa5.21□□□□□ -1.58
LTN1-207ENST00000614971 TMC1Q8TDI8 760 aa5.2□□□□□ -1.58
LTN1-207ENST00000614971 ARID4BQ4LE39 1312 aaPredicted RBP5.2□□□□□ -1.58
LTN1-207ENST00000614971 WIZO95785 1651 aa5.2□□□□□ -1.58
LTN1-207ENST00000614971 SAFB2Q14151 953 aaKnown RBP eCLIP5.2□□□□□ -1.58
LTN1-207ENST00000614971 PPM1GO15355 546 aaPredicted RBP5.2□□□□□ -1.58
LTN1-207ENST00000614971 C14orf37Q86TY3 774 aa5.2□□□□□ -1.58
LTN1-207ENST00000614971 CUX2O14529 1486 aa5.19□□□□□ -1.58
LTN1-207ENST00000614971 NACADO15069 1562 aa5.19□□□□□ -1.58
LTN1-207ENST00000614971 GOLGA3Q08378 1498 aa5.19□□□□□ -1.58
LTN1-207ENST00000614971 EIF4G1Q04637 1599 aaKnown RBP5.19□□□□□ -1.58
LTN1-207ENST00000614971 NEUROD2Q15784 382 aa5.19□□□□□ -1.58
LTN1-207ENST00000614971 RUSC2Q8N2Y8 1516 aa5.19□□□□□ -1.58
LTN1-207ENST00000614971 SOX12O15370 315 aa5.18□□□□□ -1.58
LTN1-207ENST00000614971 KIF27Q86VH2 1401 aa5.18□□□□□ -1.58
LTN1-207ENST00000614971 TRHP20396 242 aaPredicted RBP5.17□□□□□ -1.58
LTN1-207ENST00000614971 ARXQ96QS3 562 aa5.17□□□□□ -1.58
LTN1-207ENST00000614971 CARMIL1Q5VZK9 1371 aa5.16□□□□□ -1.58
LTN1-207ENST00000614971 NUTM2DQ5VT03 806 aaPredicted RBP5.16□□□□□ -1.58
LTN1-207ENST00000614971 BAZ1AQ9NRL2 1556 aaPredicted RBP5.16□□□□□ -1.58
LTN1-207ENST00000614971 NEFMP07197 916 aa5.16□□□□□ -1.58
LTN1-207ENST00000614971 RTL5Q5HYW3 569 aaPredicted RBP5.16□□□□□ -1.58
LTN1-207ENST00000614971 EIF4G2P78344 907 aaKnown RBP eCLIP5.15□□□□□ -1.58
LTN1-207ENST00000614971 PPP1R15AO75807 674 aaPredicted RBP5.15□□□□□ -1.58
LTN1-207ENST00000614971 LMOD2Q6P5Q4 547 aa5.15□□□□□ -1.58
LTN1-207ENST00000614971 TNIKQ9UKE5 1360 aa5.15□□□□□ -1.58
LTN1-207ENST00000614971 GGT6Q6P531 493 aa5.15□□□□□ -1.59
LTN1-207ENST00000614971 CC2D1BQ5T0F9 858 aaKnown RBP5.15□□□□□ -1.59
LTN1-207ENST00000614971 CARD11Q9BXL7 1154 aa5.14□□□□□ -1.59
LTN1-207ENST00000614971 ZBTB47Q9UFB7 747 aaPredicted RBP5.14□□□□□ -1.59
LTN1-207ENST00000614971 DCAF11Q8TEB1 546 aa5.14□□□□□ -1.59
LTN1-207ENST00000614971 DNAJC5BQ9UF47 199 aa5.14□□□□□ -1.59
LTN1-207ENST00000614971 NBR1Q14596 966 aa5.13□□□□□ -1.59
LTN1-207ENST00000614971 SUPT16HQ9Y5B9 1047 aaKnown RBP5.13□□□□□ -1.59
LTN1-207ENST00000614971 CEP164Q9UPV0 1460 aa5.13□□□□□ -1.59
LTN1-207ENST00000614971 CCDC136Q96JN2 1154 aa5.13□□□□□ -1.59
LTN1-207ENST00000614971 STK26Q9P289 416 aa5.13□□□□□ -1.59
LTN1-207ENST00000614971 WDR43Q15061 677 aaKnown RBP eCLIP5.12□□□□□ -1.59
LTN1-207ENST00000614971 NUTM2FA1L443 756 aa5.11□□□□□ -1.59
LTN1-207ENST00000614971 HNRNPMP52272 730 aaKnown RBP eCLIP5.11□□□□□ -1.59
LTN1-207ENST00000614971 CCNB3Q8WWL7 1395 aa5.11□□□□□ -1.59
LTN1-207ENST00000614971 LAS1LQ9Y4W2 734 aaKnown RBP5.11□□□□□ -1.59
LTN1-207ENST00000614971 FHOD3Q2V2M9 1422 aa5.11□□□□□ -1.59
LTN1-207ENST00000614971 RAPGEF2Q9Y4G8 1499 aa5.11□□□□□ -1.59
LTN1-207ENST00000614971 EEA1Q15075 1411 aa5.1□□□□□ -1.59
LTN1-207ENST00000614971 PKD2Q13563 968 aa5.1□□□□□ -1.59
LTN1-207ENST00000614971 TPRNQ4KMQ1 711 aa5.09□□□□□ -1.6
LTN1-207ENST00000614971 CYB5RLQ6IPT4 315 aa5.08□□□□□ -1.6
LTN1-207ENST00000614971 B4GALNT3Q6L9W6 998 aa5.08□□□□□ -1.6
LTN1-207ENST00000614971 U2SURPO15042 1029 aaKnown RBP5.08□□□□□ -1.6
LTN1-207ENST00000614971 POGKQ9P215 609 aa5.08□□□□□ -1.6
LTN1-207ENST00000614971 FRAT1Q92837 279 aaPredicted RBP5.07□□□□□ -1.6
LTN1-207ENST00000614971 TAOK2Q9UL54 1235 aa5.07□□□□□ -1.6
LTN1-207ENST00000614971 ANP32AP39687 249 aaKnown RBP5.07□□□□□ -1.6
LTN1-207ENST00000614971 KNSTRNQ9Y448 316 aa5.07□□□□□ -1.6
LTN1-207ENST00000614971 RAB3GAP2Q9H2M9 1393 aa5.07□□□□□ -1.6
LTN1-207ENST00000614971 HSPA5P11021 654 aaKnown RBP5.07□□□□□ -1.6
LTN1-207ENST00000614971 ZNF644Q9H582 1327 aaPredicted RBP5.07□□□□□ -1.6
LTN1-207ENST00000614971 HSP90AA1P07900 732 aaKnown RBP5.06□□□□□ -1.6
LTN1-207ENST00000614971 JPH4Q96JJ6 628 aa5.06□□□□□ -1.6
LTN1-207ENST00000614971 VPS8Q8N3P4 1428 aa5.06□□□□□ -1.6
LTN1-207ENST00000614971 ATAD2BQ9ULI0 1458 aa5.06□□□□□ -1.6
LTN1-207ENST00000614971 KIF3BO15066 747 aa5.06□□□□□ -1.6
LTN1-207ENST00000614971 HAP1P54257 671 aaPredicted RBP5.06□□□□□ -1.6
LTN1-207ENST00000614971 RGS3P49796 1198 aa5.05□□□□□ -1.6
LTN1-207ENST00000614971 RAD54L2Q9Y4B4 1467 aa5.05□□□□□ -1.6
LTN1-207ENST00000614971 SMARCA2P51531 1590 aa5.05□□□□□ -1.6
LTN1-207ENST00000614971 SRPK2P78362 688 aaKnown RBP5.05□□□□□ -1.6
LTN1-207ENST00000614971 MPHOSPH9Q99550 1183 aa5.05□□□□□ -1.6
LTN1-207ENST00000614971 CADPSQ9ULU8 1353 aa5.05□□□□□ -1.6
LTN1-207ENST00000614971 L3MBTL2Q969R5 705 aa5.05□□□□□ -1.6
LTN1-207ENST00000614971 PDS5BQ9NTI5 1447 aa5.04□□□□□ -1.6
LTN1-207ENST00000614971 NUP155O75694 1391 aa5.04□□□□□ -1.6
LTN1-207ENST00000614971 NESP48681 1621 aa5.02□□□□□ -1.61
LTN1-207ENST00000614971 FHAD1B1AJZ9 1412 aa5.02□□□□□ -1.61
LTN1-207ENST00000614971 PAK3O75914 559 aaPredicted RBP5.02□□□□□ -1.61
LTN1-207ENST00000614971 SETD5Q9C0A6 1442 aa5.02□□□□□ -1.61
LTN1-207ENST00000614971 APBB1O00213 710 aa5.02□□□□□ -1.61
LTN1-207ENST00000614971 TOP2AP11388 1531 aaKnown RBP5.02□□□□□ -1.61
LTN1-207ENST00000614971 AQRO60306 1485 aaKnown RBP eCLIP5.02□□□□□ -1.612e-6■■■■□ 20
LTN1-207ENST00000614971 CCDC146Q8IYE0 955 aa5.02□□□□□ -1.61
LTN1-207ENST00000614971 TRAK1Q9UPV9 953 aa5.02□□□□□ -1.61
LTN1-207ENST00000614971 ARHGAP35Q9NRY4 1499 aa5.02□□□□□ -1.61
LTN1-207ENST00000614971 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.01□□□□□ -1.61
LTN1-207ENST00000614971 SMARCA4P51532 1647 aa5.01□□□□□ -1.61
LTN1-207ENST00000614971 FANCD2Q9BXW9 1451 aa5.01□□□□□ -1.61
LTN1-207ENST00000614971 RRP7AQ9Y3A4 280 aaKnown RBP5□□□□□ -1.61
LTN1-207ENST00000614971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5□□□□□ -1.612e-6■■■□□ 17.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms