RNA–Protein interactions for RNA: ENST00000614800.4

SNX9-203, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-203ENST00000614800 KIF13AQ9H1H9 1805 aa10.47□□□□□ -0.73
SNX9-203ENST00000614800 GAPVD1Q14C86 1478 aa10.47□□□□□ -0.73
SNX9-203ENST00000614800 ERICH3Q5RHP9 1530 aa10.46□□□□□ -0.74
SNX9-203ENST00000614800 ABCA10Q8WWZ4 1543 aa10.46□□□□□ -0.74
SNX9-203ENST00000614800 TDRD9Q8NDG6 1382 aaKnown RBP10.45□□□□□ -0.74
SNX9-203ENST00000614800 CEP170Q5SW79 1584 aa10.43□□□□□ -0.74
SNX9-203ENST00000614800 PRXQ9BXM0 1461 aa10.43□□□□□ -0.74
SNX9-203ENST00000614800 FBLN2P98095 1184 aa10.43□□□□□ -0.74
SNX9-203ENST00000614800 ERCC6L2Q5T890 1561 aa10.43□□□□□ -0.74
SNX9-203ENST00000614800 CEP162Q5TB80 1403 aa10.42□□□□□ -0.74
SNX9-203ENST00000614800 GRIN2AQ12879 1464 aa10.42□□□□□ -0.74
SNX9-203ENST00000614800 RAPGEF2Q9Y4G8 1499 aa10.42□□□□□ -0.74
SNX9-203ENST00000614800 IGF1RP08069 1367 aa10.41□□□□□ -0.74
SNX9-203ENST00000614800 CARMIL1Q5VZK9 1371 aa10.39□□□□□ -0.75
SNX9-203ENST00000614800 NUP160Q12769 1436 aa10.38□□□□□ -0.75
SNX9-203ENST00000614800 CLIP1P30622 1438 aa10.36□□□□□ -0.75
SNX9-203ENST00000614800 CHMP7Q8WUX9 453 aaPredicted RBP10.36□□□□□ -0.75
SNX9-203ENST00000614800 CUL7Q14999 1698 aa10.36□□□□□ -0.75
SNX9-203ENST00000614800 DIP2BQ9P265 1576 aa10.32□□□□□ -0.76
SNX9-203ENST00000614800 TRIM26Q12899 539 aaPredicted RBP10.31□□□□□ -0.76
SNX9-203ENST00000614800 MAPKBP1O60336 1514 aa10.31□□□□□ -0.76
SNX9-203ENST00000614800 RANGAP1P46060 587 aaPredicted RBP10.3□□□□□ -0.76
SNX9-203ENST00000614800 APLP2Q06481 763 aa10.3□□□□□ -0.76
SNX9-203ENST00000614800 ADCY10Q96PN6 1610 aa10.29□□□□□ -0.76
SNX9-203ENST00000614800 FHAD1B1AJZ9 1412 aa10.28□□□□□ -0.76
SNX9-203ENST00000614800 KDM6BO15054 1643 aa10.27□□□□□ -0.77
SNX9-203ENST00000614800 VPS8Q8N3P4 1428 aa10.26□□□□□ -0.77
SNX9-203ENST00000614800 PCGF6Q9BYE7 350 aa10.26□□□□□ -0.77
SNX9-203ENST00000614800 ABCC10Q5T3U5 1492 aa10.24□□□□□ -0.77
SNX9-203ENST00000614800 CTTNBP2Q8WZ74 1663 aa10.22□□□□□ -0.77
SNX9-203ENST00000614800 EFCAB5A4FU69 1503 aa10.21□□□□□ -0.78
SNX9-203ENST00000614800 TSPOAP1O95153 1857 aa10.21□□□□□ -0.78
SNX9-203ENST00000614800 PPRC1Q5VV67 1664 aaKnown RBP10.2□□□□□ -0.78
SNX9-203ENST00000614800 ARHGAP35Q9NRY4 1499 aa10.2□□□□□ -0.78
SNX9-203ENST00000614800 PRG4Q92954 1404 aaPredicted RBP10.19□□□□□ -0.78
SNX9-203ENST00000614800 PPARGC1BQ86YN6 1023 aaKnown RBP10.18□□□□□ -0.78
SNX9-203ENST00000614800 FMN1Q68DA7 1419 aa10.14□□□□□ -0.79
SNX9-203ENST00000614800 IQGAP2Q13576 1575 aa10.14□□□□□ -0.79
SNX9-203ENST00000614800 P3H3Q8IVL6 736 aa10.13□□□□□ -0.79
SNX9-203ENST00000614800 KIAA0586Q9BVV6 1533 aa10.12□□□□□ -0.79
SNX9-203ENST00000614800 MAP3K4Q9Y6R4 1608 aa10.12□□□□□ -0.79
SNX9-203ENST00000614800 GLI2P10070 1586 aa10.12□□□□□ -0.79
SNX9-203ENST00000614800 TTBK1Q5TCY1 1321 aaPredicted RBP10.11□□□□□ -0.79
SNX9-203ENST00000614800 SAMD9Q5K651 1589 aa10.1□□□□□ -0.79
SNX9-203ENST00000614800 FHOD3Q2V2M9 1422 aa10.1□□□□□ -0.79
SNX9-203ENST00000614800 ATP1B4Q9UN42 357 aaPredicted RBP10.1□□□□□ -0.79
SNX9-203ENST00000614800 MAP3K1Q13233 1512 aa10.1□□□□□ -0.79
SNX9-203ENST00000614800 CASKIN1Q8WXD9 1431 aa10.09□□□□□ -0.79
SNX9-203ENST00000614800 FYCO1Q9BQS8 1478 aa10.09□□□□□ -0.79
SNX9-203ENST00000614800 ABCC2Q92887 1545 aa10.07□□□□□ -0.8
SNX9-203ENST00000614800 UGGT2Q9NYU1 1516 aa10.07□□□□□ -0.8
SNX9-203ENST00000614800 ADGRL1O94910 1474 aa10.07□□□□□ -0.8
SNX9-203ENST00000614800 HECW2Q9P2P5 1572 aa10.06□□□□□ -0.8
SNX9-203ENST00000614800 ZCCHC11Q5TAX3 1644 aaKnown RBP10.06□□□□□ -0.8
SNX9-203ENST00000614800 CARMIL2Q6F5E8 1435 aa10.06□□□□□ -0.8
SNX9-203ENST00000614800 FAM69CQ0P6D2 419 aa10.05□□□□□ -0.8
SNX9-203ENST00000614800 PCF11O94913 1555 aaKnown RBP10.05□□□□□ -0.8
SNX9-203ENST00000614800 TIAM1Q13009 1591 aa10.05□□□□□ -0.8
SNX9-203ENST00000614800 JPH4Q96JJ6 628 aa10.04□□□□□ -0.8
SNX9-203ENST00000614800 UHRF1BP1LA0JNW5 1464 aa10.04□□□□□ -0.8
SNX9-203ENST00000614800 PLB1Q6P1J6 1458 aa10.03□□□□□ -0.8
SNX9-203ENST00000614800 KDM4FA0A1W2PPD8 638 aa10.02□□□□□ -0.81
SNX9-203ENST00000614800 KANK4Q5T7N3 995 aaPredicted RBP10.02□□□□□ -0.81
SNX9-203ENST00000614800 KIAA0556O60303 1618 aa10.02□□□□□ -0.81
SNX9-203ENST00000614800 CCDC18Q5T9S5 1454 aa10.01□□□□□ -0.81
SNX9-203ENST00000614800 LRRC9Q6ZRR7 1453 aa10.01□□□□□ -0.81
SNX9-203ENST00000614800 CFAP43Q8NDM7 1665 aa10.01□□□□□ -0.81
SNX9-203ENST00000614800 ASXL2Q76L83 1435 aa10□□□□□ -0.81
SNX9-203ENST00000614800 TEX14Q8IWB6 1497 aa10□□□□□ -0.81
SNX9-203ENST00000614800 NPM1P06748 294 aaKnown RBP eCLIP10□□□□□ -0.81
SNX9-203ENST00000614800 HECW1Q76N89 1606 aa10□□□□□ -0.81
SNX9-203ENST00000614800 DISP1Q96F81 1524 aa9.99□□□□□ -0.81
SNX9-203ENST00000614800 KDM5BQ9UGL1 1544 aa9.99□□□□□ -0.81
SNX9-203ENST00000614800 ZEB1P37275 1124 aaPredicted RBP9.99□□□□□ -0.81
SNX9-203ENST00000614800 MTUS2Q5JR59 1369 aa9.99□□□□□ -0.81
SNX9-203ENST00000614800 EPRSP07814 1512 aaKnown RBP9.98□□□□□ -0.81
SNX9-203ENST00000614800 HRCP23327 699 aa9.98□□□□□ -0.81
SNX9-203ENST00000614800 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
SNX9-203ENST00000614800 PTPRGP23470 1445 aa9.96□□□□□ -0.82
SNX9-203ENST00000614800 RRBP1Q9P2E9 1410 aaKnown RBP9.95□□□□□ -0.82
SNX9-203ENST00000614800 UACAQ9BZF9 1416 aa9.94□□□□□ -0.82
SNX9-203ENST00000614800 CCNB3Q8WWL7 1395 aa9.94□□□□□ -0.82
SNX9-203ENST00000614800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.94□□□□□ -0.82
SNX9-203ENST00000614800 HNRNPUL2Q1KMD3 747 aaKnown RBP9.94□□□□□ -0.82
SNX9-203ENST00000614800 RAPGEF6Q8TEU7 1601 aa9.93□□□□□ -0.82
SNX9-203ENST00000614800 EHBP1L1Q8N3D4 1523 aa9.93□□□□□ -0.82
SNX9-203ENST00000614800 COL17A1Q9UMD9 1497 aaPredicted RBP9.93□□□□□ -0.82
SNX9-203ENST00000614800 WDR7Q9Y4E6 1490 aa9.93□□□□□ -0.82
SNX9-203ENST00000614800 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
SNX9-203ENST00000614800 FOXD1Q16676 465 aa9.91□□□□□ -0.82
SNX9-203ENST00000614800 CCER1Q8TC90 406 aaPredicted RBP9.91□□□□□ -0.82
SNX9-203ENST00000614800 SUPT6HQ7KZ85 1726 aaKnown RBP9.9□□□□□ -0.82
SNX9-203ENST00000614800 ABCA8O94911 1581 aa9.9□□□□□ -0.82
SNX9-203ENST00000614800 MAGI3Q5TCQ9 1506 aa9.9□□□□□ -0.82
SNX9-203ENST00000614800 FAM50AQ14320 339 aaKnown RBP9.89□□□□□ -0.83
SNX9-203ENST00000614800 PHLDB1Q86UU1 1377 aa9.88□□□□□ -0.83
SNX9-203ENST00000614800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.88□□□□□ -0.838e-7■■■□□ 15.4
SNX9-203ENST00000614800 NUP153P49790 1475 aaKnown RBP9.88□□□□□ -0.83
SNX9-203ENST00000614800 NCOA2Q15596 1464 aa9.88□□□□□ -0.83
SNX9-203ENST00000614800 ADAMTSL3P82987 1691 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms