RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 PRG4Q92954 1404 aaPredicted RBP19.61■□□□□ 0.73
SRSF3-204ENST00000613941 ADCY10Q96PN6 1610 aa19.61■□□□□ 0.73
SRSF3-204ENST00000613941 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
SRSF3-204ENST00000613941 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
SRSF3-204ENST00000613941 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
SRSF3-204ENST00000613941 HECW2Q9P2P5 1572 aa19.5■□□□□ 0.71
SRSF3-204ENST00000613941 ERICH3Q5RHP9 1530 aa19.5■□□□□ 0.71
SRSF3-204ENST00000613941 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
SRSF3-204ENST00000613941 WRNQ14191 1432 aaPredicted RBP eCLIP19.48■□□□□ 0.71
SRSF3-204ENST00000613941 ADGRL1O94910 1474 aa19.48■□□□□ 0.71
SRSF3-204ENST00000613941 PPRC1Q5VV67 1664 aaKnown RBP19.47■□□□□ 0.71
SRSF3-204ENST00000613941 JPH4Q96JJ6 628 aa19.47■□□□□ 0.71
SRSF3-204ENST00000613941 TOP2BQ02880 1626 aa19.45■□□□□ 0.7
SRSF3-204ENST00000613941 CUL7Q14999 1698 aa19.33■□□□□ 0.69
SRSF3-204ENST00000613941 GLI2P10070 1586 aa19.26■□□□□ 0.67
SRSF3-204ENST00000613941 COL17A1Q9UMD9 1497 aaPredicted RBP19.24■□□□□ 0.67
SRSF3-204ENST00000613941 TTBK1Q5TCY1 1321 aaPredicted RBP19.24■□□□□ 0.67
SRSF3-204ENST00000613941 MAP3K4Q9Y6R4 1608 aa19.23■□□□□ 0.67
SRSF3-204ENST00000613941 KIAA0586Q9BVV6 1533 aa19.22■□□□□ 0.67
SRSF3-204ENST00000613941 ASXL2Q76L83 1435 aa19.22■□□□□ 0.67
SRSF3-204ENST00000613941 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
SRSF3-204ENST00000613941 PTPRGP23470 1445 aa19.17■□□□□ 0.66
SRSF3-204ENST00000613941 PLB1Q6P1J6 1458 aa19.16■□□□□ 0.66
SRSF3-204ENST00000613941 FBXO41Q8TF61 875 aa19.15■□□□□ 0.66
SRSF3-204ENST00000613941 KIF21BO75037 1637 aa19.11■□□□□ 0.65
SRSF3-204ENST00000613941 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
SRSF3-204ENST00000613941 EPRSP07814 1512 aaKnown RBP19.1■□□□□ 0.65
SRSF3-204ENST00000613941 TEX14Q8IWB6 1497 aa19.09■□□□□ 0.65
SRSF3-204ENST00000613941 TNIKQ9UKE5 1360 aa19.07■□□□□ 0.64
SRSF3-204ENST00000613941 UHRF1BP1LA0JNW5 1464 aa19.05■□□□□ 0.64
SRSF3-204ENST00000613941 IQGAP2Q13576 1575 aa19.03■□□□□ 0.64
SRSF3-204ENST00000613941 CARMIL2Q6F5E8 1435 aa19.03■□□□□ 0.64
SRSF3-204ENST00000613941 UACAQ9BZF9 1416 aa19.01■□□□□ 0.63
SRSF3-204ENST00000613941 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
SRSF3-204ENST00000613941 IGF1RP08069 1367 aa19.01■□□□□ 0.63
SRSF3-204ENST00000613941 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
SRSF3-204ENST00000613941 CFAP43Q8NDM7 1665 aa18.97■□□□□ 0.63
SRSF3-204ENST00000613941 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
SRSF3-204ENST00000613941 KIF27Q86VH2 1401 aa18.94■□□□□ 0.62
SRSF3-204ENST00000613941 LMTK3Q96Q04 1460 aa18.93■□□□□ 0.62
SRSF3-204ENST00000613941 WDR7Q9Y4E6 1490 aa18.91■□□□□ 0.62
SRSF3-204ENST00000613941 ADAMTSL3P82987 1691 aa18.91■□□□□ 0.62
SRSF3-204ENST00000613941 KIAA0556O60303 1618 aa18.9■□□□□ 0.62
SRSF3-204ENST00000613941 CARMIL1Q5VZK9 1371 aa18.88■□□□□ 0.61
SRSF3-204ENST00000613941 MAGI3Q5TCQ9 1506 aa18.86■□□□□ 0.61
SRSF3-204ENST00000613941 PTPRMP28827 1452 aa18.86■□□□□ 0.61
SRSF3-204ENST00000613941 CD109Q6YHK3 1445 aa18.85■□□□□ 0.61
SRSF3-204ENST00000613941 PCF11O94913 1555 aaKnown RBP18.85■□□□□ 0.61
SRSF3-204ENST00000613941 MADDQ8WXG6 1647 aa18.83■□□□□ 0.61
SRSF3-204ENST00000613941 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.6
SRSF3-204ENST00000613941 BCORL1Q5H9F3 1711 aa18.83■□□□□ 0.6
SRSF3-204ENST00000613941 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
SRSF3-204ENST00000613941 KCNH8Q96L42 1107 aa18.78■□□□□ 0.6
SRSF3-204ENST00000613941 CTTNBP2Q8WZ74 1663 aa18.78■□□□□ 0.6
SRSF3-204ENST00000613941 ILDR2Q71H61 639 aa18.74■□□□□ 0.59
SRSF3-204ENST00000613941 ARAP3Q8WWN8 1544 aa18.74■□□□□ 0.59
SRSF3-204ENST00000613941 ABCA8O94911 1581 aa18.73■□□□□ 0.59
SRSF3-204ENST00000613941 FRMPD1Q5SYB0 1578 aa18.69■□□□□ 0.58
SRSF3-204ENST00000613941 DISP3Q9P2K9 1392 aa18.68■□□□□ 0.58
SRSF3-204ENST00000613941 SOCS7O14512 581 aa18.67■□□□□ 0.58
SRSF3-204ENST00000613941 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
SRSF3-204ENST00000613941 HSPA2P54652 639 aa18.66■□□□□ 0.58
SRSF3-204ENST00000613941 ABCA9Q8IUA7 1624 aa18.66■□□□□ 0.58
SRSF3-204ENST00000613941 RAPGEF3O95398 923 aa18.62■□□□□ 0.57
SRSF3-204ENST00000613941 CERKQ8TCT0 537 aa18.62■□□□□ 0.57
SRSF3-204ENST00000613941 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
SRSF3-204ENST00000613941 SPATA31D1Q6ZQQ2 1576 aa18.62■□□□□ 0.57
SRSF3-204ENST00000613941 SIGLEC1Q9BZZ2 1709 aa18.61■□□□□ 0.57
SRSF3-204ENST00000613941 PLPPR3Q6T4P5 718 aa18.61■□□□□ 0.57
SRSF3-204ENST00000613941 ARHGEF40Q8TER5 1519 aa18.6■□□□□ 0.57
SRSF3-204ENST00000613941 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
SRSF3-204ENST00000613941 FER1L4A9Z1Z3 1794 aa18.58■□□□□ 0.57
SRSF3-204ENST00000613941 RICTORQ6R327 1708 aa18.58■□□□□ 0.57
SRSF3-204ENST00000613941 GOLGA3Q08378 1498 aa18.57■□□□□ 0.56
SRSF3-204ENST00000613941 NEO1Q92859 1461 aa18.52■□□□□ 0.56
SRSF3-204ENST00000613941 ATP10BO94823 1461 aa18.52■□□□□ 0.55
SRSF3-204ENST00000613941 PHLDB1Q86UU1 1377 aa18.51■□□□□ 0.55
SRSF3-204ENST00000613941 PREX1Q8TCU6 1659 aa18.5■□□□□ 0.55
SRSF3-204ENST00000613941 STRCQ7RTU9 1775 aa18.5■□□□□ 0.55
SRSF3-204ENST00000613941 TTC37Q6PGP7 1564 aa18.47■□□□□ 0.55
SRSF3-204ENST00000613941 FANCAO15360 1455 aa18.45■□□□□ 0.54
SRSF3-204ENST00000613941 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
SRSF3-204ENST00000613941 DENND4BO75064 1496 aaPredicted RBP18.41■□□□□ 0.54
SRSF3-204ENST00000613941 ZFYVE16Q7Z3T8 1539 aa18.41■□□□□ 0.54
SRSF3-204ENST00000613941 CFAP74Q9C0B2 1584 aa18.41■□□□□ 0.54
SRSF3-204ENST00000613941 P3H3Q8IVL6 736 aa18.4■□□□□ 0.54
SRSF3-204ENST00000613941 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
SRSF3-204ENST00000613941 ZMYM4Q5VZL5 1548 aa18.39■□□□□ 0.54
SRSF3-204ENST00000613941 MLECQ14165 292 aa18.39■□□□□ 0.53
SRSF3-204ENST00000613941 YEATS2Q9ULM3 1422 aa18.39■□□□□ 0.53
SRSF3-204ENST00000613941 EFCAB5A4FU69 1503 aa18.39■□□□□ 0.53
SRSF3-204ENST00000613941 AKNAQ7Z591 1439 aa18.38■□□□□ 0.53
SRSF3-204ENST00000613941 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
SRSF3-204ENST00000613941 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
SRSF3-204ENST00000613941 SAMD9Q5K651 1589 aa18.34■□□□□ 0.53
SRSF3-204ENST00000613941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.34■□□□□ 0.53
SRSF3-204ENST00000613941 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
SRSF3-204ENST00000613941 ARHGEF12Q9NZN5 1544 aa18.32■□□□□ 0.52
SRSF3-204ENST00000613941 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
SRSF3-204ENST00000613941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.3■□□□□ 0.529e-8■□□□□ 9.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms