RNA–Protein interactions for RNA: ENST00000613647.4

FGFR3-210, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 5 BASIC

Gene FGFR3, Length 4,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-210ENST00000613647 SIN3AQ96ST3 1273 aa26.88■■□□□ 1.89
FGFR3-210ENST00000613647 SALL2Q9Y467 1007 aaPredicted RBP26.87■■□□□ 1.89
FGFR3-210ENST00000613647 MRS2Q9HD23 443 aa26.85■■□□□ 1.89
FGFR3-210ENST00000613647 TMC1Q8TDI8 760 aa26.84■■□□□ 1.89
FGFR3-210ENST00000613647 CANXP27824 592 aaKnown RBP26.84■■□□□ 1.89
FGFR3-210ENST00000613647 CCNB3Q8WWL7 1395 aa26.83■■□□□ 1.89
FGFR3-210ENST00000613647 KCNH8Q96L42 1107 aa26.83■■□□□ 1.89
FGFR3-210ENST00000613647 VPS8Q8N3P4 1428 aa26.83■■□□□ 1.89
FGFR3-210ENST00000613647 CFDP1Q9UEE9 299 aaPredicted RBP26.82■■□□□ 1.88
FGFR3-210ENST00000613647 KANK4Q5T7N3 995 aaPredicted RBP26.82■■□□□ 1.88
FGFR3-210ENST00000613647 TOP2AP11388 1531 aaKnown RBP26.79■■□□□ 1.88
FGFR3-210ENST00000613647 SMARCA2P51531 1590 aa26.78■■□□□ 1.88
FGFR3-210ENST00000613647 FHAD1B1AJZ9 1412 aa26.74■■□□□ 1.87
FGFR3-210ENST00000613647 NEFMP07197 916 aa26.73■■□□□ 1.87
FGFR3-210ENST00000613647 STAG3Q9UJ98 1225 aa26.7■■□□□ 1.86
FGFR3-210ENST00000613647 RGL3Q3MIN7 710 aa26.69■■□□□ 1.86
FGFR3-210ENST00000613647 BCL11AQ9H165 835 aa26.68■■□□□ 1.86
FGFR3-210ENST00000613647 ESF1Q9H501 851 aaKnown RBP26.68■■□□□ 1.86
FGFR3-210ENST00000613647 IRX6P78412 446 aaPredicted RBP26.63■■□□□ 1.85
FGFR3-210ENST00000613647 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
FGFR3-210ENST00000613647 ZBTB47Q9UFB7 747 aaPredicted RBP26.61■■□□□ 1.85
FGFR3-210ENST00000613647 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
FGFR3-210ENST00000613647 SLC24A1O60721 1099 aa26.6■■□□□ 1.85
FGFR3-210ENST00000613647 ANP32AP39687 249 aaKnown RBP26.58■■□□□ 1.85
FGFR3-210ENST00000613647 RUSC2Q8N2Y8 1516 aa26.58■■□□□ 1.85
FGFR3-210ENST00000613647 NPM2Q86SE8 214 aaKnown RBP26.57■■□□□ 1.84
FGFR3-210ENST00000613647 ERCC6Q03468 1493 aa26.56■■□□□ 1.84
FGFR3-210ENST00000613647 SMARCA4P51532 1647 aa26.55■■□□□ 1.84
FGFR3-210ENST00000613647 CCDC136Q96JN2 1154 aa26.54■■□□□ 1.84
FGFR3-210ENST00000613647 EIF4G1Q04637 1599 aaKnown RBP26.52■■□□□ 1.84
FGFR3-210ENST00000613647 CADPSQ9ULU8 1353 aa26.51■■□□□ 1.83
FGFR3-210ENST00000613647 RAPGEF2Q9Y4G8 1499 aa26.51■■□□□ 1.83
FGFR3-210ENST00000613647 PLPPR3Q6T4P5 718 aa26.51■■□□□ 1.83
FGFR3-210ENST00000613647 SENP3-EIF4A1A0A087X0R7 540 aa26.5■■□□□ 1.83
FGFR3-210ENST00000613647 WDR43Q15061 677 aaKnown RBP eCLIP26.49■■□□□ 1.831e-6■■■■■ 28.4
FGFR3-210ENST00000613647 CARD11Q9BXL7 1154 aa26.47■■□□□ 1.83
FGFR3-210ENST00000613647 SETD5Q9C0A6 1442 aa26.47■■□□□ 1.83
FGFR3-210ENST00000613647 SENP3Q9H4L4 574 aaPredicted RBP26.45■■□□□ 1.82
FGFR3-210ENST00000613647 TIMELESSQ9UNS1 1208 aa26.42■■□□□ 1.82
FGFR3-210ENST00000613647 PDS5BQ9NTI5 1447 aa26.42■■□□□ 1.82
FGFR3-210ENST00000613647 RAB3GAP2Q9H2M9 1393 aa26.39■■□□□ 1.82
FGFR3-210ENST00000613647 ARHGAP35Q9NRY4 1499 aa26.39■■□□□ 1.81
FGFR3-210ENST00000613647 SUPT16HQ9Y5B9 1047 aaKnown RBP26.35■■□□□ 1.81
FGFR3-210ENST00000613647 FOXD1Q16676 465 aa26.32■■□□□ 1.8
FGFR3-210ENST00000613647 FMN1Q68DA7 1419 aa26.32■■□□□ 1.8
FGFR3-210ENST00000613647 FHOD3Q2V2M9 1422 aa26.3■■□□□ 1.8
FGFR3-210ENST00000613647 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.3■■□□□ 1.8
FGFR3-210ENST00000613647 DCAF11Q8TEB1 546 aa26.26■■□□□ 1.79
FGFR3-210ENST00000613647 KNSTRNQ9Y448 316 aa26.22■■□□□ 1.79
FGFR3-210ENST00000613647 PKD2Q13563 968 aa26.2■■□□□ 1.78
FGFR3-210ENST00000613647 HSPA5P11021 654 aaKnown RBP26.19■■□□□ 1.78
FGFR3-210ENST00000613647 CDCA8Q53HL2 280 aa26.18■■□□□ 1.78
FGFR3-210ENST00000613647 MPHOSPH9Q99550 1183 aa26.18■■□□□ 1.78
FGFR3-210ENST00000613647 PPP1R15AO75807 674 aaPredicted RBP26.17■■□□□ 1.78
FGFR3-210ENST00000613647 CARMIL2Q6F5E8 1435 aa26.12■■□□□ 1.77
FGFR3-210ENST00000613647 UPF2Q9HAU5 1272 aaKnown RBP26.12■■□□□ 1.77
FGFR3-210ENST00000613647 FANCD2Q9BXW9 1451 aa26.1■■□□□ 1.77
FGFR3-210ENST00000613647 CCER2I3L3R5 266 aa26.08■■□□□ 1.77
FGFR3-210ENST00000613647 IGF1RP08069 1367 aa26.08■■□□□ 1.77
FGFR3-210ENST00000613647 DHX57Q6P158 1386 aaKnown RBP26.07■■□□□ 1.76
FGFR3-210ENST00000613647 CC2D1BQ5T0F9 858 aaKnown RBP26.07■■□□□ 1.76
FGFR3-210ENST00000613647 NBR1Q14596 966 aa26.03■■□□□ 1.76
FGFR3-210ENST00000613647 L3MBTL2Q969R5 705 aa26.03■■□□□ 1.76
FGFR3-210ENST00000613647 NUP155O75694 1391 aa26.02■■□□□ 1.76
FGFR3-210ENST00000613647 JPH4Q96JJ6 628 aa26.01■■□□□ 1.75
FGFR3-210ENST00000613647 NEUROD2Q15784 382 aa26.01■■□□□ 1.75
FGFR3-210ENST00000613647 HSP90AA1P07900 732 aaKnown RBP26■■□□□ 1.75
FGFR3-210ENST00000613647 TMF1P82094 1093 aa25.98■■□□□ 1.75
FGFR3-210ENST00000613647 CFAP53Q96M91 514 aa25.98■■□□□ 1.75
FGFR3-210ENST00000613647 TNNT2P45379 298 aaPredicted RBP25.96■■□□□ 1.75
FGFR3-210ENST00000613647 PPP4R2Q9NY27 417 aa25.96■■□□□ 1.75
FGFR3-210ENST00000613647 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
FGFR3-210ENST00000613647 PPM1GO15355 546 aaPredicted RBP25.95■■□□□ 1.74
FGFR3-210ENST00000613647 FGD5Q6ZNL6 1462 aa25.94■■□□□ 1.74
FGFR3-210ENST00000613647 ANKRD30AQ9BXX3 1397 aa25.94■■□□□ 1.74
FGFR3-210ENST00000613647 HNRNPMP52272 730 aaKnown RBP eCLIP25.94■■□□□ 1.745e-6■■□□□ 13.2
FGFR3-210ENST00000613647 B4GALNT3Q6L9W6 998 aa25.92■■□□□ 1.74
FGFR3-210ENST00000613647 ARID4BQ4LE39 1312 aaPredicted RBP25.92■■□□□ 1.74
FGFR3-210ENST00000613647 EFCAB2Q5VUJ9 269 aa25.91■■□□□ 1.74
FGFR3-210ENST00000613647 GGT6Q6P531 493 aa25.89■■□□□ 1.74
FGFR3-210ENST00000613647 RAD54L2Q9Y4B4 1467 aa25.89■■□□□ 1.74
FGFR3-210ENST00000613647 POGKQ9P215 609 aa25.89■■□□□ 1.73
FGFR3-210ENST00000613647 PLEKHG5O94827 1062 aa25.87■■□□□ 1.73
FGFR3-210ENST00000613647 KANK1Q14678 1352 aa25.87■■□□□ 1.73
FGFR3-210ENST00000613647 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
FGFR3-210ENST00000613647 C14orf37Q86TY3 774 aa25.83■■□□□ 1.72
FGFR3-210ENST00000613647 KIF21BO75037 1637 aa25.8■■□□□ 1.72
FGFR3-210ENST00000613647 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
FGFR3-210ENST00000613647 ROCK2O75116 1388 aaKnown RBP25.77■■□□□ 1.72
FGFR3-210ENST00000613647 SAFB2Q14151 953 aaKnown RBP eCLIP25.77■■□□□ 1.72
FGFR3-210ENST00000613647 NUDCQ9Y266 331 aa25.77■■□□□ 1.72
FGFR3-210ENST00000613647 ZBTB7CA1YPR0 619 aa25.76■■□□□ 1.71
FGFR3-210ENST00000613647 MYH16Q9H6N6 1097 aa25.76■■□□□ 1.71
FGFR3-210ENST00000613647 MLECQ14165 292 aa25.75■■□□□ 1.71
FGFR3-210ENST00000613647 FRAT1Q92837 279 aaPredicted RBP25.75■■□□□ 1.71
FGFR3-210ENST00000613647 MAPK8IP3Q9UPT6 1336 aa25.74■■□□□ 1.71
FGFR3-210ENST00000613647 U2SURPO15042 1029 aaKnown RBP25.74■■□□□ 1.71
FGFR3-210ENST00000613647 KIF3BO15066 747 aa25.74■■□□□ 1.71
FGFR3-210ENST00000613647 RSPH4AQ5TD94 716 aa25.73■■□□□ 1.71
FGFR3-210ENST00000613647 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms