RNA–Protein interactions for RNA: ENST00000612967.2

C5orf56-206, Transcript of chromosome 5 open reading frame 56, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C5orf56, Length 2,791 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-206ENST00000612967 PDE4CQ08493 712 aa18.09■□□□□ 0.49
C5orf56-206ENST00000612967 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.49
C5orf56-206ENST00000612967 USP35Q9P2H5 1018 aa18.06■□□□□ 0.48
C5orf56-206ENST00000612967 GSE1Q14687 1217 aa18.04■□□□□ 0.48
C5orf56-206ENST00000612967 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
C5orf56-206ENST00000612967 FAM43AQ8N2R8 423 aa18.02■□□□□ 0.48
C5orf56-206ENST00000612967 SCRIBQ14160 1630 aa18.02■□□□□ 0.47
C5orf56-206ENST00000612967 CCER2I3L3R5 266 aa18.02■□□□□ 0.47
C5orf56-206ENST00000612967 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
C5orf56-206ENST00000612967 HNRNPUQ00839 825 aaKnown RBP eCLIP17.99■□□□□ 0.47
C5orf56-206ENST00000612967 PPP1R15AO75807 674 aaPredicted RBP17.98■□□□□ 0.47
C5orf56-206ENST00000612967 FRAT1Q92837 279 aaPredicted RBP17.98■□□□□ 0.47
C5orf56-206ENST00000612967 HSP90AA2PQ14568 343 aaPredicted RBP17.97■□□□□ 0.47
C5orf56-206ENST00000612967 BCL11BQ9C0K0 894 aaPredicted RBP17.97■□□□□ 0.47
C5orf56-206ENST00000612967 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.46
C5orf56-206ENST00000612967 ANP32CO43423 234 aa17.94■□□□□ 0.46
C5orf56-206ENST00000612967 DCAF11Q8TEB1 546 aa17.94■□□□□ 0.46
C5orf56-206ENST00000612967 PDIA4P13667 645 aaKnown RBP17.92■□□□□ 0.46
C5orf56-206ENST00000612967 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
C5orf56-206ENST00000612967 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
C5orf56-206ENST00000612967 BICRAQ9NZM4 1560 aa17.91■□□□□ 0.46
C5orf56-206ENST00000612967 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
C5orf56-206ENST00000612967 RRAGDQ9NQL2 400 aaPredicted RBP17.88■□□□□ 0.45
C5orf56-206ENST00000612967 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
C5orf56-206ENST00000612967 RRP9O43818 475 aaKnown RBP17.87■□□□□ 0.45
C5orf56-206ENST00000612967 TNIKQ9UKE5 1360 aa17.85■□□□□ 0.45
C5orf56-206ENST00000612967 NAP1L5Q96NT1 182 aaPredicted RBP17.81■□□□□ 0.44
C5orf56-206ENST00000612967 HSP90AA1P07900 732 aaKnown RBP17.81■□□□□ 0.44
C5orf56-206ENST00000612967 NFKBIBQ15653 356 aa17.81■□□□□ 0.44
C5orf56-206ENST00000612967 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
C5orf56-206ENST00000612967 EEA1Q15075 1411 aa17.78■□□□□ 0.44
C5orf56-206ENST00000612967 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
C5orf56-206ENST00000612967 PRDM4Q9UKN5 801 aa17.76■□□□□ 0.43
C5orf56-206ENST00000612967 RGS3P49796 1198 aa17.74■□□□□ 0.43
C5orf56-206ENST00000612967 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
C5orf56-206ENST00000612967 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
C5orf56-206ENST00000612967 SLC4A3P48751 1232 aa17.65■□□□□ 0.42
C5orf56-206ENST00000612967 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
C5orf56-206ENST00000612967 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
C5orf56-206ENST00000612967 PDE4AP27815 886 aa17.62■□□□□ 0.41
C5orf56-206ENST00000612967 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
C5orf56-206ENST00000612967 FRAT2O75474 233 aaPredicted RBP17.61■□□□□ 0.41
C5orf56-206ENST00000612967 CCDC184Q52MB2 194 aa17.61■□□□□ 0.41
C5orf56-206ENST00000612967 SOGA1O94964 1423 aa17.6■□□□□ 0.41
C5orf56-206ENST00000612967 CALD1Q05682 793 aaKnown RBP17.6■□□□□ 0.41
C5orf56-206ENST00000612967 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
C5orf56-206ENST00000612967 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
C5orf56-206ENST00000612967 AKNAQ7Z591 1439 aa17.56■□□□□ 0.4
C5orf56-206ENST00000612967 BBXQ8WY36 941 aaPredicted RBP17.56■□□□□ 0.4
C5orf56-206ENST00000612967 BACH2Q9BYV9 841 aa17.56■□□□□ 0.4
C5orf56-206ENST00000612967 CLIP1P30622 1438 aa17.55■□□□□ 0.4
C5orf56-206ENST00000612967 MAPKBP1O60336 1514 aa17.53■□□□□ 0.4
C5orf56-206ENST00000612967 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
C5orf56-206ENST00000612967 NAP1L2Q9ULW6 460 aaPredicted RBP17.53■□□□□ 0.4
C5orf56-206ENST00000612967 CLCN1P35523 988 aa17.52■□□□□ 0.4
C5orf56-206ENST00000612967 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.4
C5orf56-206ENST00000612967 TAF7LQ5H9L4 462 aa17.52■□□□□ 0.4
C5orf56-206ENST00000612967 GTF2E1P29083 439 aaPredicted RBP17.51■□□□□ 0.39
C5orf56-206ENST00000612967 KLHL34Q8N239 644 aa17.51■□□□□ 0.39
C5orf56-206ENST00000612967 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
C5orf56-206ENST00000612967 PDCL3Q9H2J4 239 aa17.5■□□□□ 0.39
C5orf56-206ENST00000612967 PAXIP1Q6ZW49 1069 aaPredicted RBP17.49■□□□□ 0.39
C5orf56-206ENST00000612967 POGKQ9P215 609 aa17.49■□□□□ 0.39
C5orf56-206ENST00000612967 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
C5orf56-206ENST00000612967 ZBED9Q6R2W3 1325 aa17.48■□□□□ 0.39
C5orf56-206ENST00000612967 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
C5orf56-206ENST00000612967 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
C5orf56-206ENST00000612967 DDRGK1Q96HY6 314 aa17.47■□□□□ 0.39
C5orf56-206ENST00000612967 ARXQ96QS3 562 aa17.46■□□□□ 0.39
C5orf56-206ENST00000612967 EIF4G1Q04637 1599 aaKnown RBP17.44■□□□□ 0.38
C5orf56-206ENST00000612967 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
C5orf56-206ENST00000612967 PEG3Q9GZU2 1588 aa17.43■□□□□ 0.38
C5orf56-206ENST00000612967 RANGAP1P46060 587 aaPredicted RBP17.42■□□□□ 0.38
C5orf56-206ENST00000612967 STAC3Q96MF2 364 aa17.42■□□□□ 0.38
C5orf56-206ENST00000612967 SKAP1Q86WV1 359 aa17.41■□□□□ 0.38
C5orf56-206ENST00000612967 RNF123Q5XPI4 1314 aa17.4■□□□□ 0.38
C5orf56-206ENST00000612967 ZHX1Q9UKY1 873 aaPredicted RBP17.4■□□□□ 0.38
C5orf56-206ENST00000612967 RAB3GAP2Q9H2M9 1393 aa17.39■□□□□ 0.37
C5orf56-206ENST00000612967 CUX2O14529 1486 aa17.39■□□□□ 0.37
C5orf56-206ENST00000612967 FOXD1Q16676 465 aa17.38■□□□□ 0.37
C5orf56-206ENST00000612967 SENP3-EIF4A1A0A087X0R7 540 aa17.37■□□□□ 0.37
C5orf56-206ENST00000612967 KANK4Q5T7N3 995 aaPredicted RBP17.37■□□□□ 0.37
C5orf56-206ENST00000612967 PANK2Q9BZ23 570 aa17.37■□□□□ 0.37
C5orf56-206ENST00000612967 CECR2Q9BXF3 1484 aa17.36■□□□□ 0.37
C5orf56-206ENST00000612967 XRCC6P12956 609 aaKnown RBP eCLIP17.35■□□□□ 0.37
C5orf56-206ENST00000612967 L1TD1Q5T7N2 865 aaKnown RBP17.35■□□□□ 0.37
C5orf56-206ENST00000612967 CC2D2AQ9P2K1 1620 aa17.35■□□□□ 0.37
C5orf56-206ENST00000612967 MS4A1P11836 297 aa17.34■□□□□ 0.37
C5orf56-206ENST00000612967 MRS2Q9HD23 443 aa17.34■□□□□ 0.37
C5orf56-206ENST00000612967 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
C5orf56-206ENST00000612967 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.37
C5orf56-206ENST00000612967 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
C5orf56-206ENST00000612967 EXOC6Q8TAG9 804 aa17.31■□□□□ 0.36
C5orf56-206ENST00000612967 ERBB4Q15303 1308 aa17.3■□□□□ 0.36
C5orf56-206ENST00000612967 TPM2P07951 284 aa17.3■□□□□ 0.36
C5orf56-206ENST00000612967 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
C5orf56-206ENST00000612967 IPO4Q8TEX9 1081 aaKnown RBP17.29■□□□□ 0.36
C5orf56-206ENST00000612967 RRBP1Q9P2E9 1410 aaKnown RBP17.28■□□□□ 0.36
C5orf56-206ENST00000612967 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
C5orf56-206ENST00000612967 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms