RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 JPH4Q96JJ6 628 aa42■■■■■ 4.31
MMP28-203ENST00000612672 ADCY10Q96PN6 1610 aa41.86■■■■■ 4.29
MMP28-203ENST00000612672 ABCC10Q5T3U5 1492 aa41.79■■■■■ 4.28
MMP28-203ENST00000612672 DIP2BQ9P265 1576 aa41.79■■■■■ 4.28
MMP28-203ENST00000612672 MAPKBP1O60336 1514 aa41.79■■■■■ 4.28
MMP28-203ENST00000612672 FAM69CQ0P6D2 419 aa41.7■■■■■ 4.27
MMP28-203ENST00000612672 IGF1RP08069 1367 aa41.7■■■■■ 4.27
MMP28-203ENST00000612672 KIAA0586Q9BVV6 1533 aa41.69■■■■■ 4.27
MMP28-203ENST00000612672 CUL7Q14999 1698 aa41.68■■■■■ 4.26
MMP28-203ENST00000612672 KIF27Q86VH2 1401 aa41.59■■■■■ 4.25
MMP28-203ENST00000612672 NPM1P06748 294 aaKnown RBP eCLIP41.56■■■■■ 4.24
MMP28-203ENST00000612672 TSPOAP1O95153 1857 aa41.54■■■■■ 4.24
MMP28-203ENST00000612672 KDM6BO15054 1643 aa41.47■■■■■ 4.23
MMP28-203ENST00000612672 CARMIL1Q5VZK9 1371 aa41.37■■■■■ 4.21
MMP28-203ENST00000612672 PTPRGP23470 1445 aa41.35■■■■■ 4.21
MMP28-203ENST00000612672 TTBK1Q5TCY1 1321 aaPredicted RBP41.3■■■■■ 4.2
MMP28-203ENST00000612672 IQGAP2Q13576 1575 aa41.29■■■■■ 4.2
MMP28-203ENST00000612672 PPRC1Q5VV67 1664 aaKnown RBP41.28■■■■■ 4.2
MMP28-203ENST00000612672 ABCC2Q92887 1545 aa41.28■■■■■ 4.2
MMP28-203ENST00000612672 KDM4FA0A1W2PPD8 638 aa41.26■■■■■ 4.2
MMP28-203ENST00000612672 TNIKQ9UKE5 1360 aa41.25■■■■■ 4.19
MMP28-203ENST00000612672 CARMIL2Q6F5E8 1435 aa41.2■■■■■ 4.19
MMP28-203ENST00000612672 ASXL2Q76L83 1435 aa41.18■■■■■ 4.18
MMP28-203ENST00000612672 DISP1Q96F81 1524 aa41.18■■■■■ 4.18
MMP28-203ENST00000612672 GLI2P10070 1586 aa41.15■■■■■ 4.18
MMP28-203ENST00000612672 UHRF1BP1LA0JNW5 1464 aa41.14■■■■■ 4.18
MMP28-203ENST00000612672 PLB1Q6P1J6 1458 aa41.09■■■■■ 4.17
MMP28-203ENST00000612672 UACAQ9BZF9 1416 aa41.07■■■■■ 4.16
MMP28-203ENST00000612672 UGGT2Q9NYU1 1516 aa41.02■■■■■ 4.16
MMP28-203ENST00000612672 ZCCHC11Q5TAX3 1644 aaKnown RBP40.99■■■■■ 4.15
MMP28-203ENST00000612672 KDM5BQ9UGL1 1544 aa40.98■■■■■ 4.15
MMP28-203ENST00000612672 KIAA0556O60303 1618 aa40.98■■■■■ 4.15
MMP28-203ENST00000612672 MAP3K4Q9Y6R4 1608 aa40.97■■■■■ 4.15
MMP28-203ENST00000612672 EPRSP07814 1512 aaKnown RBP40.97■■■■■ 4.15
MMP28-203ENST00000612672 COL17A1Q9UMD9 1497 aaPredicted RBP40.96■■■■■ 4.15
MMP28-203ENST00000612672 RAPGEF2Q9Y4G8 1499 aa40.96■■■■■ 4.15
MMP28-203ENST00000612672 ADGRL1O94910 1474 aa40.83■■■■■ 4.13
MMP28-203ENST00000612672 CTTNBP2Q8WZ74 1663 aa40.8■■■■■ 4.12
MMP28-203ENST00000612672 TEX14Q8IWB6 1497 aa40.7■■■■■ 4.11
MMP28-203ENST00000612672 WDR7Q9Y4E6 1490 aa40.7■■■■■ 4.11
MMP28-203ENST00000612672 ABCA8O94911 1581 aa40.63■■■■■ 4.09
MMP28-203ENST00000612672 CFAP43Q8NDM7 1665 aa40.55■■■■■ 4.08
MMP28-203ENST00000612672 GOLGA3Q08378 1498 aa40.51■■■■■ 4.07
MMP28-203ENST00000612672 PRXQ9BXM0 1461 aa40.49■■■■■ 4.07
MMP28-203ENST00000612672 MAGI3Q5TCQ9 1506 aa40.48■■■■■ 4.07
MMP28-203ENST00000612672 HECW2Q9P2P5 1572 aa40.48■■■■■ 4.07
MMP28-203ENST00000612672 CD109Q6YHK3 1445 aa40.45■■■■■ 4.07
MMP28-203ENST00000612672 ILDR1Q86SU0 546 aaPredicted RBP40.43■■■■■ 4.06
MMP28-203ENST00000612672 KCNH8Q96L42 1107 aa40.39■■■■■ 4.06
MMP28-203ENST00000612672 KIF21BO75037 1637 aa40.33■■■■■ 4.05
MMP28-203ENST00000612672 ARID3CA6NKF2 412 aa40.25■■■■■ 4.03
MMP28-203ENST00000612672 ATP10BO94823 1461 aa40.24■■■■■ 4.03
MMP28-203ENST00000612672 P3H3Q8IVL6 736 aa40.2■■■■■ 4.03
MMP28-203ENST00000612672 SAMD9Q5K651 1589 aa40.18■■■■■ 4.02
MMP28-203ENST00000612672 ARAP3Q8WWN8 1544 aa40.18■■■■■ 4.02
MMP28-203ENST00000612672 ABCA9Q8IUA7 1624 aa40.17■■■■■ 4.02
MMP28-203ENST00000612672 RAPGEF6Q8TEU7 1601 aa40.09■■■■■ 4.01
MMP28-203ENST00000612672 FRMPD1Q5SYB0 1578 aa40.01■■■■□ 3.99
MMP28-203ENST00000612672 ADAMTSL3P82987 1691 aa39.99■■■■□ 3.99
MMP28-203ENST00000612672 NUP153P49790 1475 aaKnown RBP39.94■■■■□ 3.98
MMP28-203ENST00000612672 RAPGEF3O95398 923 aa39.92■■■■□ 3.98
MMP28-203ENST00000612672 CSRNP3Q8WYN3 585 aa39.91■■■■□ 3.98
MMP28-203ENST00000612672 NEO1Q92859 1461 aa39.9■■■■□ 3.98
MMP28-203ENST00000612672 PHLDB1Q86UU1 1377 aa39.88■■■■□ 3.97
MMP28-203ENST00000612672 PTPRMP28827 1452 aa39.88■■■■□ 3.97
MMP28-203ENST00000612672 BCORL1Q5H9F3 1711 aa39.85■■■■□ 3.97
MMP28-203ENST00000612672 FHOD3Q2V2M9 1422 aa39.85■■■■□ 3.97
MMP28-203ENST00000612672 MADDQ8WXG6 1647 aa39.81■■■■□ 3.96
MMP28-203ENST00000612672 FAM9AQ8IZU1 332 aaPredicted RBP39.8■■■■□ 3.96
MMP28-203ENST00000612672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.77■■■■□ 3.96
MMP28-203ENST00000612672 HNRNPUL2Q1KMD3 747 aaKnown RBP39.77■■■■□ 3.96
MMP28-203ENST00000612672 RICTORQ6R327 1708 aa39.77■■■■□ 3.96
MMP28-203ENST00000612672 RANGAP1P46060 587 aaPredicted RBP39.76■■■■□ 3.96
MMP28-203ENST00000612672 ARHGEF40Q8TER5 1519 aa39.74■■■■□ 3.95
MMP28-203ENST00000612672 TTC37Q6PGP7 1564 aa39.68■■■■□ 3.94
MMP28-203ENST00000612672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.68■■■■□ 3.94
MMP28-203ENST00000612672 SIGLEC1Q9BZZ2 1709 aa39.67■■■■□ 3.94
MMP28-203ENST00000612672 RIMS1Q86UR5 1692 aaKnown RBP39.65■■■■□ 3.94
MMP28-203ENST00000612672 EEA1Q15075 1411 aa39.64■■■■□ 3.94
MMP28-203ENST00000612672 PCF11O94913 1555 aaKnown RBP39.62■■■■□ 3.93
MMP28-203ENST00000612672 DENND4BO75064 1496 aaPredicted RBP39.62■■■■□ 3.93
MMP28-203ENST00000612672 AKNAQ7Z591 1439 aa39.61■■■■□ 3.93
MMP28-203ENST00000612672 LMTK3Q96Q04 1460 aa39.6■■■■□ 3.93
MMP28-203ENST00000612672 FANCAO15360 1455 aa39.59■■■■□ 3.93
MMP28-203ENST00000612672 CFAP74Q9C0B2 1584 aa39.59■■■■□ 3.93
MMP28-203ENST00000612672 ARID4BQ4LE39 1312 aaPredicted RBP39.58■■■■□ 3.93
MMP28-203ENST00000612672 EFCAB5A4FU69 1503 aa39.57■■■■□ 3.93
MMP28-203ENST00000612672 CDK13Q14004 1512 aaKnown RBP39.55■■■■□ 3.92
MMP28-203ENST00000612672 ZMYM4Q5VZL5 1548 aa39.55■■■■□ 3.92
MMP28-203ENST00000612672 PLEKHD1A6NEE1 506 aa39.53■■■■□ 3.92
MMP28-203ENST00000612672 YEATS2Q9ULM3 1422 aa39.49■■■■□ 3.91
MMP28-203ENST00000612672 FBXO41Q8TF61 875 aa39.48■■■■□ 3.91
MMP28-203ENST00000612672 ZFYVE16Q7Z3T8 1539 aa39.45■■■■□ 3.91
MMP28-203ENST00000612672 HECW1Q76N89 1606 aa39.43■■■■□ 3.9
MMP28-203ENST00000612672 FER1L4A9Z1Z3 1794 aa39.34■■■■□ 3.89
MMP28-203ENST00000612672 POGZQ7Z3K3 1410 aa39.33■■■■□ 3.89
MMP28-203ENST00000612672 PLCH2O75038 1416 aa39.31■■■■□ 3.88
MMP28-203ENST00000612672 MAGI2Q86UL8 1455 aa39.31■■■■□ 3.88
MMP28-203ENST00000612672 HSPA2P54652 639 aa39.31■■■■□ 3.88
MMP28-203ENST00000612672 PLPPR3Q6T4P5 718 aa39.3■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms