RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 MSH5O43196 834 aa19.74■□□□□ 0.75
HOXA3-207ENST00000612286 WDR97A6NE52 1622 aa19.72■□□□□ 0.75
HOXA3-207ENST00000612286 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
HOXA3-207ENST00000612286 PPP1R15AO75807 674 aaPredicted RBP19.7■□□□□ 0.74
HOXA3-207ENST00000612286 NBR1Q14596 966 aa19.7■□□□□ 0.74
HOXA3-207ENST00000612286 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
HOXA3-207ENST00000612286 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
HOXA3-207ENST00000612286 CDK11AQ9UQ88 783 aaPredicted RBP19.69■□□□□ 0.74
HOXA3-207ENST00000612286 PHLDB1Q86UU1 1377 aa19.68■□□□□ 0.74
HOXA3-207ENST00000612286 RRP7BPQ9NSQ0 103 aa19.67■□□□□ 0.74
HOXA3-207ENST00000612286 SETD5Q9C0A6 1442 aa19.67■□□□□ 0.74
HOXA3-207ENST00000612286 FOXD1Q16676 465 aa19.66■□□□□ 0.74
HOXA3-207ENST00000612286 CCDC184Q52MB2 194 aa19.64■□□□□ 0.73
HOXA3-207ENST00000612286 KIF27Q86VH2 1401 aa19.64■□□□□ 0.73
HOXA3-207ENST00000612286 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
HOXA3-207ENST00000612286 ARHGAP35Q9NRY4 1499 aa19.62■□□□□ 0.73
HOXA3-207ENST00000612286 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
HOXA3-207ENST00000612286 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
HOXA3-207ENST00000612286 CUX2O14529 1486 aa19.58■□□□□ 0.72
HOXA3-207ENST00000612286 MAPKBP1O60336 1514 aa19.58■□□□□ 0.72
HOXA3-207ENST00000612286 PRXQ9BXM0 1461 aa19.57■□□□□ 0.72
HOXA3-207ENST00000612286 SALL2Q9Y467 1007 aaPredicted RBP19.53■□□□□ 0.72
HOXA3-207ENST00000612286 FHOD3Q2V2M9 1422 aa19.52■□□□□ 0.72
HOXA3-207ENST00000612286 MRS2Q9HD23 443 aa19.52■□□□□ 0.72
HOXA3-207ENST00000612286 BICRAQ9NZM4 1560 aa19.51■□□□□ 0.71
HOXA3-207ENST00000612286 HSPA5P11021 654 aaKnown RBP19.5■□□□□ 0.71
HOXA3-207ENST00000612286 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
HOXA3-207ENST00000612286 CCER2I3L3R5 266 aa19.47■□□□□ 0.71
HOXA3-207ENST00000612286 CUX1P39880 1505 aa19.47■□□□□ 0.71
HOXA3-207ENST00000612286 NPM2Q86SE8 214 aaKnown RBP19.46■□□□□ 0.71
HOXA3-207ENST00000612286 TOP2BQ02880 1626 aa19.45■□□□□ 0.7
HOXA3-207ENST00000612286 IGF1RP08069 1367 aa19.44■□□□□ 0.7
HOXA3-207ENST00000612286 MTUS2Q5JR59 1369 aa19.42■□□□□ 0.7
HOXA3-207ENST00000612286 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.7
HOXA3-207ENST00000612286 LRRC9Q6ZRR7 1453 aa19.39■□□□□ 0.69
HOXA3-207ENST00000612286 DEKP35659 375 aaKnown RBP19.38■□□□□ 0.69
HOXA3-207ENST00000612286 C11orf95C9JLR9 678 aaPredicted RBP19.38■□□□□ 0.69
HOXA3-207ENST00000612286 RTN4Q9NQC3 1192 aaKnown RBP19.37■□□□□ 0.69
HOXA3-207ENST00000612286 PAK3O75914 559 aaPredicted RBP19.36■□□□□ 0.69
HOXA3-207ENST00000612286 EIF4G2P78344 907 aaKnown RBP eCLIP19.35■□□□□ 0.69
HOXA3-207ENST00000612286 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
HOXA3-207ENST00000612286 PPP4R2Q9NY27 417 aa19.32■□□□□ 0.68
HOXA3-207ENST00000612286 L3MBTL2Q969R5 705 aa19.32■□□□□ 0.68
HOXA3-207ENST00000612286 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
HOXA3-207ENST00000612286 TIAM1Q13009 1591 aa19.29■□□□□ 0.68
HOXA3-207ENST00000612286 CCDC136Q96JN2 1154 aa19.29■□□□□ 0.68
HOXA3-207ENST00000612286 CCDC18Q5T9S5 1454 aa19.26■□□□□ 0.67
HOXA3-207ENST00000612286 PTPRKQ15262 1439 aa19.25■□□□□ 0.67
HOXA3-207ENST00000612286 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.67
HOXA3-207ENST00000612286 RAD54L2Q9Y4B4 1467 aa19.24■□□□□ 0.67
HOXA3-207ENST00000612286 ZNF777Q9ULD5 760 aaPredicted RBP19.24■□□□□ 0.67
HOXA3-207ENST00000612286 PRKRIP1Q9H875 184 aaPredicted RBP19.23■□□□□ 0.67
HOXA3-207ENST00000612286 LAS1LQ9Y4W2 734 aaKnown RBP19.23■□□□□ 0.67
HOXA3-207ENST00000612286 NOP58Q9Y2X3 529 aaKnown RBP19.21■□□□□ 0.67
HOXA3-207ENST00000612286 FHAD1B1AJZ9 1412 aa19.21■□□□□ 0.67
HOXA3-207ENST00000612286 KDM2AQ9Y2K7 1162 aa19.2■□□□□ 0.66
HOXA3-207ENST00000612286 FANCIQ9NVI1 1328 aa19.2■□□□□ 0.66
HOXA3-207ENST00000612286 TIMELESSQ9UNS1 1208 aa19.2■□□□□ 0.66
HOXA3-207ENST00000612286 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
HOXA3-207ENST00000612286 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
HOXA3-207ENST00000612286 AKNAQ7Z591 1439 aa19.19■□□□□ 0.66
HOXA3-207ENST00000612286 SKAP1Q86WV1 359 aa19.19■□□□□ 0.66
HOXA3-207ENST00000612286 RTL5Q5HYW3 569 aaPredicted RBP19.18■□□□□ 0.66
HOXA3-207ENST00000612286 PCF11O94913 1555 aaKnown RBP19.18■□□□□ 0.66
HOXA3-207ENST00000612286 NBPF8Q3BBV2 869 aa19.18■□□□□ 0.66
HOXA3-207ENST00000612286 MPHOSPH9Q99550 1183 aa19.18■□□□□ 0.66
HOXA3-207ENST00000612286 SLC4A1APQ9BWU0 796 aaKnown RBP19.18■□□□□ 0.66
HOXA3-207ENST00000612286 FGD6Q6ZV73 1430 aa19.16■□□□□ 0.66
HOXA3-207ENST00000612286 BIVM-ERCC5R4GMW8 1640 aa19.16■□□□□ 0.66
HOXA3-207ENST00000612286 ANP32AP39687 249 aaKnown RBP19.15■□□□□ 0.66
HOXA3-207ENST00000612286 ZNF644Q9H582 1327 aaPredicted RBP19.12■□□□□ 0.65
HOXA3-207ENST00000612286 TMC1Q8TDI8 760 aa19.11■□□□□ 0.65
HOXA3-207ENST00000612286 ZBTB47Q9UFB7 747 aaPredicted RBP19.11■□□□□ 0.65
HOXA3-207ENST00000612286 KIF7Q2M1P5 1343 aa19.08■□□□□ 0.65
HOXA3-207ENST00000612286 CFTRP13569 1480 aa19.07■□□□□ 0.64
HOXA3-207ENST00000612286 UACAQ9BZF9 1416 aa19.07■□□□□ 0.64
HOXA3-207ENST00000612286 ANO8Q9HCE9 1232 aaPredicted RBP19.06■□□□□ 0.64
HOXA3-207ENST00000612286 NAIPQ13075 1403 aa19.06■□□□□ 0.64
HOXA3-207ENST00000612286 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.05■□□□□ 0.64
HOXA3-207ENST00000612286 IL27Q8NEV9 243 aa19.04■□□□□ 0.64
HOXA3-207ENST00000612286 CCDC7Q96M83 1385 aa19.04■□□□□ 0.64
HOXA3-207ENST00000612286 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
HOXA3-207ENST00000612286 FMN1Q68DA7 1419 aa19.03■□□□□ 0.64
HOXA3-207ENST00000612286 PLIN1O60240 522 aa19.02■□□□□ 0.64
HOXA3-207ENST00000612286 ZBED9Q6R2W3 1325 aa19.01■□□□□ 0.63
HOXA3-207ENST00000612286 SLC4A3P48751 1232 aa19.01■□□□□ 0.63
HOXA3-207ENST00000612286 NCOA2Q15596 1464 aa19■□□□□ 0.63
HOXA3-207ENST00000612286 EXOC6Q8TAG9 804 aa19■□□□□ 0.63
HOXA3-207ENST00000612286 CNTLNQ9NXG0 1405 aa19■□□□□ 0.63
HOXA3-207ENST00000612286 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
HOXA3-207ENST00000612286 HFM1A2PYH4 1435 aa18.98■□□□□ 0.63
HOXA3-207ENST00000612286 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
HOXA3-207ENST00000612286 NESP48681 1621 aa18.97■□□□□ 0.63
HOXA3-207ENST00000612286 NEFMP07197 916 aa18.96■□□□□ 0.63
HOXA3-207ENST00000612286 FBLN2P98095 1184 aa18.96■□□□□ 0.63
HOXA3-207ENST00000612286 CASKIN1Q8WXD9 1431 aa18.96■□□□□ 0.63
HOXA3-207ENST00000612286 RGL3Q3MIN7 710 aa18.95■□□□□ 0.62
HOXA3-207ENST00000612286 NUDCQ9Y266 331 aa18.95■□□□□ 0.62
HOXA3-207ENST00000612286 IPO9Q96P70 1041 aaKnown RBP18.95■□□□□ 0.62
HOXA3-207ENST00000612286 MAP3K1Q13233 1512 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms